Miyakogusa Predicted Gene
- Lj6g3v1827400.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj6g3v1827400.1 Non Characterized Hit- tr|B7PBX7|B7PBX7_IXOSC
Putative uncharacterized protein OS=Ixodes scapularis
,33.91,5e-19,PEROXISOMAL MEMBRANE PROTEIN 2, PXMP2
(MPV17),Mpv17/PMP22; Mpv17_PMP22,Mpv17/PMP22; seg,NULL,CUFF.59997.1
(190 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr2g023850.1 | peroxisomal membrane 22 kDa (Mpv17/PMP22) fami... 277 4e-75
Medtr1g075540.1 | peroxisomal membrane 22 kDa (Mpv17/PMP22) fami... 214 3e-56
Medtr1g075540.3 | peroxisomal membrane 22 kDa (Mpv17/PMP22) fami... 214 3e-56
Medtr1g075540.2 | peroxisomal membrane 22 kDa (Mpv17/PMP22) fami... 214 3e-56
Medtr1g075540.4 | peroxisomal membrane 22 kDa (Mpv17/PMP22) fami... 197 6e-51
Medtr1g008350.1 | peroxisomal membrane 22 kDa (Mpv17/PMP22) fami... 60 9e-10
Medtr6g038540.1 | peroxisomal membrane 22 kDa (Mpv17/PMP22) fami... 60 2e-09
Medtr8g103490.1 | peroxisomal membrane 22 kDa (Mpv17/PMP22) fami... 59 4e-09
Medtr1g106775.1 | peroxisomal membrane 22 kDa (Mpv17/PMP22) fami... 53 2e-07
Medtr7g088590.2 | peroxisomal membrane 22 kDa (Mpv17/PMP22) fami... 51 7e-07
Medtr7g088590.1 | peroxisomal membrane 22 kDa (Mpv17/PMP22) fami... 50 1e-06
>Medtr2g023850.1 | peroxisomal membrane 22 kDa (Mpv17/PMP22) family
protein | HC | chr2:8451876-8458201 | 20130731
Length = 185
Score = 277 bits (708), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 142/180 (78%), Positives = 157/180 (87%)
Query: 1 MGSVAKNGLNNYVKQLQQHPLRTKVITAGVLSGISDIVSQKLTGIQRLQFKRLLLKVIFG 60
M SVAKNGLN+YVKQLQ+HPLRTKVITAGVLSGISDIVSQKLTGIQ+LQ KRLLLKV+ G
Sbjct: 1 MSSVAKNGLNSYVKQLQEHPLRTKVITAGVLSGISDIVSQKLTGIQKLQVKRLLLKVLLG 60
Query: 61 AAYLGPFGHFFHIMLDKIFXXXXXXXXXXXXXLIEQLTSSPWNNLLFLIYYGLVVEGRPW 120
A YLGPFGH+FHI+L+KIF LIEQLTSSP NNL+F+IYYGLV+EG+PW
Sbjct: 61 AGYLGPFGHYFHIILEKIFKGKKDSKTVIKRVLIEQLTSSPLNNLIFMIYYGLVIEGQPW 120
Query: 121 VHVKAKVKKDYPSVQYTSWTFWPVVGWINHKFMPLHFRVVFHSFIAFGWGIFLNLRARSM 180
V+VKA+VKK YPSVQ SWTFWPVVGWIN+KFMPLHFRVVFHS +AF WGIFLNLRARSM
Sbjct: 121 VNVKARVKKGYPSVQKASWTFWPVVGWINYKFMPLHFRVVFHSLVAFVWGIFLNLRARSM 180
>Medtr1g075540.1 | peroxisomal membrane 22 kDa (Mpv17/PMP22) family
protein | HC | chr1:33457614-33453019 | 20130731
Length = 187
Score = 214 bits (546), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 98/189 (51%), Positives = 135/189 (71%), Gaps = 4/189 (2%)
Query: 1 MGSVAKNGLNNYVKQLQQHPLRTKVITAGVLSGISDIVSQKLTGIQRLQFKRLLLKVIFG 60
M + N Y+ QL+ HPLRTK IT+ VL G SD V+QK++G ++LQF+R+LL +++G
Sbjct: 1 MSDKVNDAWNKYLLQLKLHPLRTKAITSSVLVGFSDAVAQKISGAKKLQFRRILLFMLYG 60
Query: 61 AAYLGPFGHFFHIMLDKIFXXXXXXXXXXXXXLIEQLTSSPWNNLLFLIYYGLVVEGRPW 120
AY GPFGH+ H+++DK+F ++EQ+TSSPWNN F++YYGLV+EGRP
Sbjct: 61 FAYSGPFGHYLHLLMDKLFKGKKGNETVAKKVILEQITSSPWNNFFFMMYYGLVIEGRPL 120
Query: 121 VHVKAKVKKDYPSVQYTSWTFWPVVGWINHKFMPLHFRVVFHSFIAFGWGIFLNLRARSM 180
V KVK DYP+VQ +W FWP+VGW+N+++MPL FRV+FH+F+ W IFLNL+ARS
Sbjct: 121 NIVMNKVKNDYPAVQLMAWKFWPIVGWVNYQYMPLQFRVLFHNFVGSCWAIFLNLKARS- 179
Query: 181 VPRSVALTK 189
SVA+ K
Sbjct: 180 ---SVAIIK 185
>Medtr1g075540.3 | peroxisomal membrane 22 kDa (Mpv17/PMP22) family
protein | HC | chr1:33457294-33453001 | 20130731
Length = 187
Score = 214 bits (546), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 98/189 (51%), Positives = 135/189 (71%), Gaps = 4/189 (2%)
Query: 1 MGSVAKNGLNNYVKQLQQHPLRTKVITAGVLSGISDIVSQKLTGIQRLQFKRLLLKVIFG 60
M + N Y+ QL+ HPLRTK IT+ VL G SD V+QK++G ++LQF+R+LL +++G
Sbjct: 1 MSDKVNDAWNKYLLQLKLHPLRTKAITSSVLVGFSDAVAQKISGAKKLQFRRILLFMLYG 60
Query: 61 AAYLGPFGHFFHIMLDKIFXXXXXXXXXXXXXLIEQLTSSPWNNLLFLIYYGLVVEGRPW 120
AY GPFGH+ H+++DK+F ++EQ+TSSPWNN F++YYGLV+EGRP
Sbjct: 61 FAYSGPFGHYLHLLMDKLFKGKKGNETVAKKVILEQITSSPWNNFFFMMYYGLVIEGRPL 120
Query: 121 VHVKAKVKKDYPSVQYTSWTFWPVVGWINHKFMPLHFRVVFHSFIAFGWGIFLNLRARSM 180
V KVK DYP+VQ +W FWP+VGW+N+++MPL FRV+FH+F+ W IFLNL+ARS
Sbjct: 121 NIVMNKVKNDYPAVQLMAWKFWPIVGWVNYQYMPLQFRVLFHNFVGSCWAIFLNLKARS- 179
Query: 181 VPRSVALTK 189
SVA+ K
Sbjct: 180 ---SVAIIK 185
>Medtr1g075540.2 | peroxisomal membrane 22 kDa (Mpv17/PMP22) family
protein | HC | chr1:33457354-33453221 | 20130731
Length = 187
Score = 214 bits (546), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 98/189 (51%), Positives = 135/189 (71%), Gaps = 4/189 (2%)
Query: 1 MGSVAKNGLNNYVKQLQQHPLRTKVITAGVLSGISDIVSQKLTGIQRLQFKRLLLKVIFG 60
M + N Y+ QL+ HPLRTK IT+ VL G SD V+QK++G ++LQF+R+LL +++G
Sbjct: 1 MSDKVNDAWNKYLLQLKLHPLRTKAITSSVLVGFSDAVAQKISGAKKLQFRRILLFMLYG 60
Query: 61 AAYLGPFGHFFHIMLDKIFXXXXXXXXXXXXXLIEQLTSSPWNNLLFLIYYGLVVEGRPW 120
AY GPFGH+ H+++DK+F ++EQ+TSSPWNN F++YYGLV+EGRP
Sbjct: 61 FAYSGPFGHYLHLLMDKLFKGKKGNETVAKKVILEQITSSPWNNFFFMMYYGLVIEGRPL 120
Query: 121 VHVKAKVKKDYPSVQYTSWTFWPVVGWINHKFMPLHFRVVFHSFIAFGWGIFLNLRARSM 180
V KVK DYP+VQ +W FWP+VGW+N+++MPL FRV+FH+F+ W IFLNL+ARS
Sbjct: 121 NIVMNKVKNDYPAVQLMAWKFWPIVGWVNYQYMPLQFRVLFHNFVGSCWAIFLNLKARS- 179
Query: 181 VPRSVALTK 189
SVA+ K
Sbjct: 180 ---SVAIIK 185
>Medtr1g075540.4 | peroxisomal membrane 22 kDa (Mpv17/PMP22) family
protein | HC | chr1:33457454-33453262 | 20130731
Length = 169
Score = 197 bits (500), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 86/169 (50%), Positives = 121/169 (71%)
Query: 1 MGSVAKNGLNNYVKQLQQHPLRTKVITAGVLSGISDIVSQKLTGIQRLQFKRLLLKVIFG 60
M + N Y+ QL+ HPLRTK IT+ VL G SD V+QK++G ++LQF+R+LL +++G
Sbjct: 1 MSDKVNDAWNKYLLQLKLHPLRTKAITSSVLVGFSDAVAQKISGAKKLQFRRILLFMLYG 60
Query: 61 AAYLGPFGHFFHIMLDKIFXXXXXXXXXXXXXLIEQLTSSPWNNLLFLIYYGLVVEGRPW 120
AY GPFGH+ H+++DK+F ++EQ+TSSPWNN F++YYGLV+EGRP
Sbjct: 61 FAYSGPFGHYLHLLMDKLFKGKKGNETVAKKVILEQITSSPWNNFFFMMYYGLVIEGRPL 120
Query: 121 VHVKAKVKKDYPSVQYTSWTFWPVVGWINHKFMPLHFRVVFHSFIAFGW 169
V KVK DYP+VQ +W FWP+VGW+N+++MPL FRV+FH+F+ W
Sbjct: 121 NIVMNKVKNDYPAVQLMAWKFWPIVGWVNYQYMPLQFRVLFHNFVGSCW 169
>Medtr1g008350.1 | peroxisomal membrane 22 kDa (Mpv17/PMP22) family
protein | HC | chr1:861041-865731 | 20130731
Length = 214
Score = 60.5 bits (145), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 85/187 (45%), Gaps = 25/187 (13%)
Query: 12 YVKQLQQHPLRTKVITAGVLSGISDIVSQKLT-------GIQ------------RLQFKR 52
Y L HP++T+VI++G + G D+ +Q +T G+ ++ +KR
Sbjct: 8 YQNCLAVHPVKTQVISSGFIWGAGDVAAQYVTHYTAKTRGVTNESHSQDDKKEFKINWKR 67
Query: 53 LLLKVIFGAAYLGPFGHFFHIMLDKIFXXXXXXXXXXXXXLIEQLTSS-----PWNNLLF 107
+ +FG A++GP GH+++ LDK + ++ + P + L+F
Sbjct: 68 VSTTSLFGLAFVGPVGHYWYEGLDKFIRHRLLLKPNSFRFVAAKVGADGFLFGPLDLLVF 127
Query: 108 LIYYGLVVEGRPWVHVKAKVKKDYPSVQYTSWTFWPVVGWINHKFMPLHFRVVFHSFIAF 167
Y G G+ +K VK+D+ WPVV N +++P+ +++++ +F
Sbjct: 128 FTYMGFST-GKSVPQIKEDVKRDFLPALILEGGIWPVVQVANFRYVPVRYQLLYVNFFCL 186
Query: 168 GWGIFLN 174
FL+
Sbjct: 187 LDSCFLS 193
>Medtr6g038540.1 | peroxisomal membrane 22 kDa (Mpv17/PMP22) family
protein | HC | chr6:13814332-13819860 | 20130731
Length = 244
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 68/149 (45%), Gaps = 4/149 (2%)
Query: 12 YVKQLQQHPLRTKVITAGVLSGISDIVSQKLT--GIQRLQFKRLLLKVIFGAAYLGPFGH 69
Y+++L+ +P+ TK IT+ ++ +D+ SQ +T KR I+G LGP H
Sbjct: 56 YLRKLETYPVLTKCITSSLIFTAADLTSQMITLPSSASYDLKRTSRMTIYGLLILGPSQH 115
Query: 70 FFHIMLDKIFXXXXXXXXXXXXXLIEQLTSSPWNNLLFLIYYGLVVEGRPWVHVKAKVKK 129
+ L KI L+ Q P N +F Y G ++G + A++K+
Sbjct: 116 KYFNFLSKILPNRDVATTLKKI-LMGQALFGPVINTVFFSYIG-ALQGESGPEIVARLKR 173
Query: 130 DYPSVQYTSWTFWPVVGWINHKFMPLHFR 158
D FWPV ++ KF+P+H +
Sbjct: 174 DLLPTLIGGAMFWPVCDFVTFKFVPVHLQ 202
>Medtr8g103490.1 | peroxisomal membrane 22 kDa (Mpv17/PMP22) family
protein | HC | chr8:43543333-43545462 | 20130731
Length = 226
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 81/179 (45%), Gaps = 28/179 (15%)
Query: 10 NNYVKQLQQHPLRTKVITAGVLSGISDIVSQKLTGI--------QRLQ------------ 49
N Y L HP+RT+V T+GVL + D+ +Q +T +RLQ
Sbjct: 9 NWYQNSLSVHPVRTQVATSGVLWAVGDVTAQYITHSAAASSSSKKRLQLSATKAADDKFV 68
Query: 50 --FKRLLLKVIFGAAYLGPFGHFFHIMLDKIFXXXXXXXXXXXXXL-----IEQLTSSPW 102
++R+ + +FG ++GP GHF++ L+K + ++ L P
Sbjct: 69 IDWRRVAVTSMFGVGFVGPVGHFWYEGLEKFISHKLQLMPQTARSVATKVAMDGLIFGPV 128
Query: 103 NNLLFLIYYGLVVEGRPWVHVKAKVKKDYPSVQYTSWTFWPVVGWINHKFMPLHFRVVF 161
+ +F Y GL G+ VK +K++Y WP+V N +++P+ +++++
Sbjct: 129 HLFVFFSYMGLSA-GKTIPEVKEDLKRNYFPALVLEGGVWPIVQVFNFRYVPVKYQLLY 186
>Medtr1g106775.1 | peroxisomal membrane 22 kDa (Mpv17/PMP22) family
protein | HC | chr1:48311526-48306713 | 20130731
Length = 259
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/168 (20%), Positives = 73/168 (43%), Gaps = 4/168 (2%)
Query: 12 YVKQLQQHPLRTKVITAGVLSGISDIVSQKLT--GIQRLQFKRLLLKVIFGAAYLGPFGH 69
Y+ ++ P+ TK +T+ ++ +D+ SQ + + F R L +G LGP H
Sbjct: 85 YLGMIKSRPILTKSVTSALIYTAADLSSQTIERQSSKSFDFIRTLRMAGYGMIILGPSLH 144
Query: 70 FFHIMLDKIFXXXXXXXXXXXXXLIEQLTSSPWNNLLFLIYYGLVVEGRPWVHVKAKVKK 129
F+ + K+F + + + + F + GL +G + A++K+
Sbjct: 145 FWFNFVSKLFPGRDIFSTLKKMAMGQGIYGPAMTVIFFSLNAGL--QGENSKEIVARLKR 202
Query: 130 DYPSVQYTSWTFWPVVGWINHKFMPLHFRVVFHSFIAFGWGIFLNLRA 177
D +WP+ +I +F P+H + + + ++ W I++ A
Sbjct: 203 DLLPTMLNGVMYWPMCDFITFRFAPVHLQPLVSNSFSYLWTIYMTYMA 250
>Medtr7g088590.2 | peroxisomal membrane 22 kDa (Mpv17/PMP22) family
protein | HC | chr7:34521820-34525349 | 20130731
Length = 245
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 72/149 (48%), Gaps = 4/149 (2%)
Query: 12 YVKQLQQHPLRTKVITAGVLSGISDIVSQ-KLTGIQRLQFKRLLLKVIFGAAYLGPFGHF 70
Y+ L ++P+ K +T+ +L+ I D++ Q + +Q KR L G +GP HF
Sbjct: 97 YMALLAKYPVPVKALTSAILNLIGDLICQLVIDKVQTPDLKRTFLFSFLGLVLVGPTLHF 156
Query: 71 FHIMLDKIFXXXXXXXXXXXXXLIEQLTSSPWNNLLFLIYYGLVVEGRPWVHVKAKVKKD 130
+++ L ++ L +Q SP +FL + +EGRP V K+K++
Sbjct: 157 WYLYLSQLVTLPGTSGAILRLVL-DQFVFSPIFLGVFLSSL-VTLEGRPSQAVP-KLKQE 213
Query: 131 YPSVQYTSWTFWPVVGWINHKFMPLHFRV 159
+ S +W W ++N +F+P F++
Sbjct: 214 WFSAVLANWQLWIPFQFLNFRFVPQQFQI 242
>Medtr7g088590.1 | peroxisomal membrane 22 kDa (Mpv17/PMP22) family
protein | HC | chr7:34521931-34525157 | 20130731
Length = 257
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 72/149 (48%), Gaps = 4/149 (2%)
Query: 12 YVKQLQQHPLRTKVITAGVLSGISDIVSQ-KLTGIQRLQFKRLLLKVIFGAAYLGPFGHF 70
Y+ L ++P+ K +T+ +L+ I D++ Q + +Q KR L G +GP HF
Sbjct: 97 YMALLAKYPVPVKALTSAILNLIGDLICQLVIDKVQTPDLKRTFLFSFLGLVLVGPTLHF 156
Query: 71 FHIMLDKIFXXXXXXXXXXXXXLIEQLTSSPWNNLLFLIYYGLVVEGRPWVHVKAKVKKD 130
+++ L ++ L +Q SP +FL + +EGRP V K+K++
Sbjct: 157 WYLYLSQLVTLPGTSGAILRLVL-DQFVFSPIFLGVFLSSL-VTLEGRPSQAVP-KLKQE 213
Query: 131 YPSVQYTSWTFWPVVGWINHKFMPLHFRV 159
+ S +W W ++N +F+P F++
Sbjct: 214 WFSAVLANWQLWIPFQFLNFRFVPQQFQM 242