Miyakogusa Predicted Gene

Lj6g3v1786740.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1786740.1 Non Characterized Hit- tr|I1MFM7|I1MFM7_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,62.12,2e-17,seg,NULL,CUFF.59925.1
         (132 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g025520.1 | DUF506 family protein | HC | chr2:9117344-9115...    59   2e-09
Medtr4g132963.1 | DUF506 family protein | HC | chr4:55623578-556...    54   3e-08
Medtr4g132940.1 | DUF506 family protein | HC | chr4:55616274-556...    54   3e-08

>Medtr2g025520.1 | DUF506 family protein | HC | chr2:9117344-9115581
           | 20130731
          Length = 321

 Score = 58.5 bits (140), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/134 (36%), Positives = 64/134 (47%), Gaps = 6/134 (4%)

Query: 1   MARIPVRFQRMAAAFEADVA--RVRPCXXXXXXXXXXXXXVTDLSDLVNSFMEKNERSAG 58
           MA +P+RFQR+  AF+ADVA  R + C               DLSDLV SFME +ERS  
Sbjct: 1   MANVPMRFQRVMEAFDADVALSRGKLCSESSGSEHSPESS-PDLSDLVLSFMEDSERSGE 59

Query: 59  EELVDVRREEDNEKGACDXXXXXXXXXXXXXXREMLLGFFAGNXXXXXXXXXXXXXXTIK 118
           E+ V  R ++ + KGA D               E+L G F GN               I+
Sbjct: 60  EKDVVARSKDCDGKGAED--VEEIGEWCDSEKNEILKGLFGGNEDVVDEDEKDAKER-IR 116

Query: 119 GEVEFALGIVGDSS 132
            EVE A+G++G  S
Sbjct: 117 REVELAIGLLGSDS 130


>Medtr4g132963.1 | DUF506 family protein | HC |
          chr4:55623578-55622354 | 20130731
          Length = 284

 Score = 54.3 bits (129), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 34/66 (51%), Positives = 41/66 (62%), Gaps = 3/66 (4%)

Query: 4  IPVRFQRMAAAFEAD-VARVRPCXXXXXXXXXXXXXVTDLSDLVNSFMEKNERSAGEELV 62
          IPVRF+R+AAAFE+D VARVR C              TDLSDLV SF+EKN   A E+ V
Sbjct: 5  IPVRFERVAAAFESDEVARVRLCESSGSEHSPESS--TDLSDLVKSFLEKNSVRAEEDAV 62

Query: 63 DVRREE 68
             +E+
Sbjct: 63 AFDKED 68


>Medtr4g132940.1 | DUF506 family protein | HC |
          chr4:55616274-55615094 | 20130731
          Length = 284

 Score = 54.3 bits (129), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 34/66 (51%), Positives = 41/66 (62%), Gaps = 3/66 (4%)

Query: 4  IPVRFQRMAAAFEAD-VARVRPCXXXXXXXXXXXXXVTDLSDLVNSFMEKNERSAGEELV 62
          IPVRF+R+AAAFE+D VARVR C              TDLSDLV SF+EKN   A E+ V
Sbjct: 5  IPVRFERVAAAFESDEVARVRLCESSGSEHSPESS--TDLSDLVKSFLEKNSVRAEEDAV 62

Query: 63 DVRREE 68
             +E+
Sbjct: 63 AFDKED 68