Miyakogusa Predicted Gene

Lj6g3v1319710.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1319710.1 Non Characterized Hit- tr|I3S9R2|I3S9R2_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,100,0,seg,NULL;
L7: 60S ribosomal protein L7,Ribosomal protein L7, eukaryotic;
Ribosomal_L30_N,Ribosomal p,CUFF.59356.1
         (245 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g022385.1 | thaliana 60S ribosomal protein L7 | HC | chr1:...   410   e-115
Medtr2g038250.1 | thaliana 60S ribosomal protein L7 | HC | chr2:...   403   e-113
Medtr4g008160.1 | thaliana 60S ribosomal protein L7 | HC | chr4:...   377   e-105
Medtr7g059170.2 | thaliana 60S ribosomal protein L7 | HC | chr7:...   214   6e-56
Medtr7g059170.3 | thaliana 60S ribosomal protein L7 | HC | chr7:...   214   6e-56
Medtr7g059170.1 | thaliana 60S ribosomal protein L7 | HC | chr7:...   214   6e-56
Medtr1g022375.1 | 60S ribosomal protein L7, putative | LC | chr1...   114   6e-26

>Medtr1g022385.1 | thaliana 60S ribosomal protein L7 | HC |
           chr1:7108698-7105236 | 20130731
          Length = 275

 Score =  410 bits (1054), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 199/244 (81%), Positives = 213/244 (87%)

Query: 2   VSKEEVKAVVPESVLKKQKRNEEWALATKQQLEAAKKKRAVSRKLIWSRAQQYAKEYDEQ 61
           +SKEEVK VVPESVLKKQKRNEEWAL  KQ+ E+AKKKRA +RKLIWSRA+QYAKEYD+Q
Sbjct: 32  MSKEEVKTVVPESVLKKQKRNEEWALVKKQEQESAKKKRAQTRKLIWSRAKQYAKEYDDQ 91

Query: 62  QKELVRLKREAKLKGGFYVNPEAKLLFIVRIRGINAMHPKTRKXXXXXXXXXXFNGVFLK 121
           QKEL+ LKREAKLKGGFYV+PEAKLLFI+RIRGINAM PK+RK          FNGVFLK
Sbjct: 92  QKELISLKREAKLKGGFYVDPEAKLLFIIRIRGINAMDPKSRKILQLLRLRQIFNGVFLK 151

Query: 122 VNKATVNMLQRVEPYVTYGYPNLKSIRELIYKRGYGKVNKQRIALTDNSVIEQTLGKHGI 181
           VNKATVNML RVEPYVTYGYPNLKS+RELIYKRGYGKV++QRIALTDNS+IEQ LGKHGI
Sbjct: 152 VNKATVNMLHRVEPYVTYGYPNLKSVRELIYKRGYGKVDRQRIALTDNSIIEQVLGKHGI 211

Query: 182 ICIEDLIHEILTVGPHFREANNFLWPFXXXXXXXXXXXXRNHYVEGGDAGNREDYINELI 241
           ICIEDLIHEILTVGPHFREANNFLWPF            RNHYVEGGDAGNREDYINELI
Sbjct: 212 ICIEDLIHEILTVGPHFREANNFLWPFKLKAPLGGMKKKRNHYVEGGDAGNREDYINELI 271

Query: 242 RRMN 245
           RRMN
Sbjct: 272 RRMN 275


>Medtr2g038250.1 | thaliana 60S ribosomal protein L7 | HC |
           chr2:16653396-16650568 | 20130731
          Length = 244

 Score =  403 bits (1035), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 195/244 (79%), Positives = 211/244 (86%)

Query: 2   VSKEEVKAVVPESVLKKQKRNEEWALATKQQLEAAKKKRAVSRKLIWSRAQQYAKEYDEQ 61
           ++KEEVK VVPESVLKKQKRNEEWAL  KQ+ E+AKKKR+ +RKLIWSRA+QYAKEYD+ 
Sbjct: 1   MAKEEVKTVVPESVLKKQKRNEEWALVKKQEQESAKKKRSETRKLIWSRAKQYAKEYDDS 60

Query: 62  QKELVRLKREAKLKGGFYVNPEAKLLFIVRIRGINAMHPKTRKXXXXXXXXXXFNGVFLK 121
           QKEL+ LKREAKLKGGFYV+PEAKLLFI+RIRGINAM PK+RK           NGVFLK
Sbjct: 61  QKELIALKREAKLKGGFYVDPEAKLLFIIRIRGINAMDPKSRKILQLLRLRQICNGVFLK 120

Query: 122 VNKATVNMLQRVEPYVTYGYPNLKSIRELIYKRGYGKVNKQRIALTDNSVIEQTLGKHGI 181
           VNKATVNML RVEPYVTYGYPNLKS+RELIYKRGYGKV++QRIALTDNS+IEQ LGKHGI
Sbjct: 121 VNKATVNMLHRVEPYVTYGYPNLKSVRELIYKRGYGKVDRQRIALTDNSIIEQVLGKHGI 180

Query: 182 ICIEDLIHEILTVGPHFREANNFLWPFXXXXXXXXXXXXRNHYVEGGDAGNREDYINELI 241
           ICIEDLIHEILTVGPHFREANNFLWPF            RNHYVEGGDAGNREDYINELI
Sbjct: 181 ICIEDLIHEILTVGPHFREANNFLWPFKLKAPLGGMKKKRNHYVEGGDAGNREDYINELI 240

Query: 242 RRMN 245
           RRMN
Sbjct: 241 RRMN 244


>Medtr4g008160.1 | thaliana 60S ribosomal protein L7 | HC |
           chr4:1428326-1425811 | 20130731
          Length = 243

 Score =  377 bits (968), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 179/241 (74%), Positives = 207/241 (85%)

Query: 5   EEVKAVVPESVLKKQKRNEEWALATKQQLEAAKKKRAVSRKLIWSRAQQYAKEYDEQQKE 64
           EEVK++VPESVLKKQ R E+WALA  Q+ EA+KKKRA +RKLI+SRA+QY++EY+++++E
Sbjct: 3   EEVKSIVPESVLKKQNREEQWALAKTQESEASKKKRAENRKLIYSRAKQYSQEYEDKERE 62

Query: 65  LVRLKREAKLKGGFYVNPEAKLLFIVRIRGINAMHPKTRKXXXXXXXXXXFNGVFLKVNK 124
           L+ LKREAKLKGGFYV+PEAKLLFI+RIRGINAM PKTRK          FNGVFLKVNK
Sbjct: 63  LISLKREAKLKGGFYVDPEAKLLFIIRIRGINAMDPKTRKILQLFRLRQIFNGVFLKVNK 122

Query: 125 ATVNMLQRVEPYVTYGYPNLKSIRELIYKRGYGKVNKQRIALTDNSVIEQTLGKHGIICI 184
           AT+NML RVEPYVTYGYPNLKS+RELIYKRGYGK+++QR  LTDNS+IEQ LGKHGI+CI
Sbjct: 123 ATMNMLHRVEPYVTYGYPNLKSVRELIYKRGYGKLDRQRTPLTDNSIIEQGLGKHGILCI 182

Query: 185 EDLIHEILTVGPHFREANNFLWPFXXXXXXXXXXXXRNHYVEGGDAGNREDYINELIRRM 244
           EDLIHEILTVGPHF+EANNFLWPF            RNHYVEGGDAGNRE+YINELI+RM
Sbjct: 183 EDLIHEILTVGPHFKEANNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNRENYINELIKRM 242

Query: 245 N 245
           N
Sbjct: 243 N 243


>Medtr7g059170.2 | thaliana 60S ribosomal protein L7 | HC |
           chr7:21344567-21342776 | 20130731
          Length = 246

 Score =  214 bits (545), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 106/247 (42%), Positives = 156/247 (63%), Gaps = 3/247 (1%)

Query: 1   MVSKEEVKAV--VPESVLKKQKRNEEWALATKQQLEAAKKKRAVSRKLIWSRAQQYAKEY 58
           M  +E+ K +  +PE +LKK+K +E WAL+ K QL+    +   S+  I  + + +  EY
Sbjct: 1   MAEEEQPKDLNYIPEVILKKRKHSEAWALSKKAQLQKKSFQLRKSKDFI-KKPEDFIFEY 59

Query: 59  DEQQKELVRLKREAKLKGGFYVNPEAKLLFIVRIRGINAMHPKTRKXXXXXXXXXXFNGV 118
             ++ +L+R+KR  K + G    P  K + ++RI+G   MH  TRK          F+ V
Sbjct: 60  RNREIDLIRMKRRVKWRRGDKSKPSNKPIIVIRIQGKQDMHATTRKHLFSLGLRRIFSAV 119

Query: 119 FLKVNKATVNMLQRVEPYVTYGYPNLKSIRELIYKRGYGKVNKQRIALTDNSVIEQTLGK 178
           F+K     +  L RVEPYVTYGY NLK+I+ELIYK+G+ K++K+++ LTDN++IEQ LGK
Sbjct: 120 FVKPTDGVMAKLARVEPYVTYGYANLKTIKELIYKKGHAKIDKRKVPLTDNNLIEQELGK 179

Query: 179 HGIICIEDLIHEILTVGPHFREANNFLWPFXXXXXXXXXXXXRNHYVEGGDAGNREDYIN 238
            G++CIED++H+I  VGPHF+E   F+WPF            +N Y +GGD+G+RED IN
Sbjct: 180 FGVVCIEDIVHQIDNVGPHFKEVVRFMWPFELNKPADGLKGLKNRYKDGGDSGDREDLIN 239

Query: 239 ELIRRMN 245
           ELI +MN
Sbjct: 240 ELINKMN 246


>Medtr7g059170.3 | thaliana 60S ribosomal protein L7 | HC |
           chr7:21344567-21342776 | 20130731
          Length = 246

 Score =  214 bits (545), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 106/247 (42%), Positives = 156/247 (63%), Gaps = 3/247 (1%)

Query: 1   MVSKEEVKAV--VPESVLKKQKRNEEWALATKQQLEAAKKKRAVSRKLIWSRAQQYAKEY 58
           M  +E+ K +  +PE +LKK+K +E WAL+ K QL+    +   S+  I  + + +  EY
Sbjct: 1   MAEEEQPKDLNYIPEVILKKRKHSEAWALSKKAQLQKKSFQLRKSKDFI-KKPEDFIFEY 59

Query: 59  DEQQKELVRLKREAKLKGGFYVNPEAKLLFIVRIRGINAMHPKTRKXXXXXXXXXXFNGV 118
             ++ +L+R+KR  K + G    P  K + ++RI+G   MH  TRK          F+ V
Sbjct: 60  RNREIDLIRMKRRVKWRRGDKSKPSNKPIIVIRIQGKQDMHATTRKHLFSLGLRRIFSAV 119

Query: 119 FLKVNKATVNMLQRVEPYVTYGYPNLKSIRELIYKRGYGKVNKQRIALTDNSVIEQTLGK 178
           F+K     +  L RVEPYVTYGY NLK+I+ELIYK+G+ K++K+++ LTDN++IEQ LGK
Sbjct: 120 FVKPTDGVMAKLARVEPYVTYGYANLKTIKELIYKKGHAKIDKRKVPLTDNNLIEQELGK 179

Query: 179 HGIICIEDLIHEILTVGPHFREANNFLWPFXXXXXXXXXXXXRNHYVEGGDAGNREDYIN 238
            G++CIED++H+I  VGPHF+E   F+WPF            +N Y +GGD+G+RED IN
Sbjct: 180 FGVVCIEDIVHQIDNVGPHFKEVVRFMWPFELNKPADGLKGLKNRYKDGGDSGDREDLIN 239

Query: 239 ELIRRMN 245
           ELI +MN
Sbjct: 240 ELINKMN 246


>Medtr7g059170.1 | thaliana 60S ribosomal protein L7 | HC |
           chr7:21344567-21342776 | 20130731
          Length = 246

 Score =  214 bits (545), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 106/247 (42%), Positives = 156/247 (63%), Gaps = 3/247 (1%)

Query: 1   MVSKEEVKAV--VPESVLKKQKRNEEWALATKQQLEAAKKKRAVSRKLIWSRAQQYAKEY 58
           M  +E+ K +  +PE +LKK+K +E WAL+ K QL+    +   S+  I  + + +  EY
Sbjct: 1   MAEEEQPKDLNYIPEVILKKRKHSEAWALSKKAQLQKKSFQLRKSKDFI-KKPEDFIFEY 59

Query: 59  DEQQKELVRLKREAKLKGGFYVNPEAKLLFIVRIRGINAMHPKTRKXXXXXXXXXXFNGV 118
             ++ +L+R+KR  K + G    P  K + ++RI+G   MH  TRK          F+ V
Sbjct: 60  RNREIDLIRMKRRVKWRRGDKSKPSNKPIIVIRIQGKQDMHATTRKHLFSLGLRRIFSAV 119

Query: 119 FLKVNKATVNMLQRVEPYVTYGYPNLKSIRELIYKRGYGKVNKQRIALTDNSVIEQTLGK 178
           F+K     +  L RVEPYVTYGY NLK+I+ELIYK+G+ K++K+++ LTDN++IEQ LGK
Sbjct: 120 FVKPTDGVMAKLARVEPYVTYGYANLKTIKELIYKKGHAKIDKRKVPLTDNNLIEQELGK 179

Query: 179 HGIICIEDLIHEILTVGPHFREANNFLWPFXXXXXXXXXXXXRNHYVEGGDAGNREDYIN 238
            G++CIED++H+I  VGPHF+E   F+WPF            +N Y +GGD+G+RED IN
Sbjct: 180 FGVVCIEDIVHQIDNVGPHFKEVVRFMWPFELNKPADGLKGLKNRYKDGGDSGDREDLIN 239

Query: 239 ELIRRMN 245
           ELI +MN
Sbjct: 240 ELINKMN 246


>Medtr1g022375.1 | 60S ribosomal protein L7, putative | LC |
           chr1:7096779-7095436 | 20130731
          Length = 156

 Score =  114 bits (286), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 52/80 (65%), Positives = 58/80 (72%)

Query: 156 YGKVNKQRIALTDNSVIEQTLGKHGIICIEDLIHEILTVGPHFREANNFLWPFXXXXXXX 215
           YG  +  R++ +  + I+  LGKHGIICIEDLIHEILTVGPHFREANNFLWPF       
Sbjct: 77  YGPDDHYRVSTSIGAGIDMVLGKHGIICIEDLIHEILTVGPHFREANNFLWPFKLKAPLG 136

Query: 216 XXXXXRNHYVEGGDAGNRED 235
                RNHYVEGGDAGNRED
Sbjct: 137 GRKKKRNHYVEGGDAGNRED 156