Miyakogusa Predicted Gene

Lj6g3v1078570.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1078570.1 CUFF.58995.1
         (175 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g450100.1 | transmembrane protein, putative | HC | chr2:22...   256   1e-68
Medtr4g050050.1 | plant/T7A14-6 protein | HC | chr4:17684049-176...   135   2e-32
Medtr4g050050.2 | plant/T7A14-6 protein | HC | chr4:17684100-176...   127   8e-30
Medtr2g024090.1 | plant/T7A14-6 protein | HC | chr2:8568277-8569...   109   2e-24
Medtr7g113900.1 | transmembrane protein, putative | HC | chr7:46...    78   3e-15
Medtr4g106610.1 | transmembrane protein, putative | LC | chr4:44...    60   8e-10

>Medtr2g450100.1 | transmembrane protein, putative | HC |
           chr2:22100013-22097586 | 20130731
          Length = 177

 Score =  256 bits (653), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 121/165 (73%), Positives = 137/165 (83%), Gaps = 1/165 (0%)

Query: 12  WLRWCLVLFAVVSALGVCGPALYWRFKKGIAIRAXXXXXXXXXXXXXX-XXXFQVAPGLV 70
           WLRWCLVLFA++SAL VCGPALYWRFK GI + +                  FQ+APGL 
Sbjct: 13  WLRWCLVLFAMISALMVCGPALYWRFKNGITLNSKLSSCPPCICHCPPPLSLFQLAPGLA 72

Query: 71  NLSVSDCGGNDPDLKEEMEKQFVDLLTEELKLQESVAEAHSRHMNITFAEAKRVGAQYQR 130
           NLSVSDCGGNDP+L+EEMEKQFVDLLTEELKLQESV+EAH+RHMNIT AEAKRVG+QYQR
Sbjct: 73  NLSVSDCGGNDPELREEMEKQFVDLLTEELKLQESVSEAHTRHMNITLAEAKRVGSQYQR 132

Query: 131 EADKCIAATETCEQAREQAQAKFIKEKKMTLVWERRARQMGWEGE 175
           EA KC++ATETCEQAREQA+A   KE+K+TLVWE+RARQMGWEGE
Sbjct: 133 EAGKCVSATETCEQAREQAEAMLTKERKITLVWEKRARQMGWEGE 177


>Medtr4g050050.1 | plant/T7A14-6 protein | HC |
           chr4:17684049-17687047 | 20130731
          Length = 193

 Score =  135 bits (340), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 71/171 (41%), Positives = 98/171 (57%), Gaps = 5/171 (2%)

Query: 8   DSGIWLRWCLVLFAVVSALGVCGPALYWRFKKGIAIRAXXXXXXXXXXXX-----XXXXX 62
            S   LR  L++ AV  A  + GP LYW FK+G+A                         
Sbjct: 6   SSVTLLRATLIIVAVCIAGYILGPPLYWHFKEGLAAVKHSSSSSSSTCSPCLCDCSSQPT 65

Query: 63  FQVAPGLVNLSVSDCGGNDPDLKEEMEKQFVDLLTEELKLQESVAEAHSRHMNITFAEAK 122
           F +  GL N+S  DC   DP++  + EK F +LL+EELKL+ES A  + R  ++   EAK
Sbjct: 66  FSIPQGLSNISFGDCAKPDPEVNGDTEKNFAELLSEELKLRESQALENQRRADMALLEAK 125

Query: 123 RVGAQYQREADKCIAATETCEQAREQAQAKFIKEKKMTLVWERRARQMGWE 173
           +V +QYQ+EADKC +  ETCEQARE+A+   + +KK+T +WE RARQ GW+
Sbjct: 126 KVASQYQKEADKCNSGMETCEQAREKAELALVAQKKVTSLWELRARQKGWK 176


>Medtr4g050050.2 | plant/T7A14-6 protein | HC |
           chr4:17684100-17686967 | 20130731
          Length = 160

 Score =  127 bits (318), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 66/161 (40%), Positives = 93/161 (57%), Gaps = 28/161 (17%)

Query: 13  LRWCLVLFAVVSALGVCGPALYWRFKKGIAIRAXXXXXXXXXXXXXXXXXFQVAPGLVNL 72
           LR  L++ AV  A  + GP LYW FK+G++                            N+
Sbjct: 11  LRATLIIVAVCIAGYILGPPLYWHFKEGLS----------------------------NI 42

Query: 73  SVSDCGGNDPDLKEEMEKQFVDLLTEELKLQESVAEAHSRHMNITFAEAKRVGAQYQREA 132
           S  DC   DP++  + EK F +LL+EELKL+ES A  + R  ++   EAK+V +QYQ+EA
Sbjct: 43  SFGDCAKPDPEVNGDTEKNFAELLSEELKLRESQALENQRRADMALLEAKKVASQYQKEA 102

Query: 133 DKCIAATETCEQAREQAQAKFIKEKKMTLVWERRARQMGWE 173
           DKC +  ETCEQARE+A+   + +KK+T +WE RARQ GW+
Sbjct: 103 DKCNSGMETCEQAREKAELALVAQKKVTSLWELRARQKGWK 143


>Medtr2g024090.1 | plant/T7A14-6 protein | HC | chr2:8568277-8569938
           | 20130731
          Length = 176

 Score =  109 bits (272), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 60/158 (37%), Positives = 85/158 (53%), Gaps = 5/158 (3%)

Query: 18  VLFAVVSALGVC---GPALYWRFKKGIAIRAXXXXXXXXXXXXXXXXXFQVAPGLVNLSV 74
           VLF ++     C   GP L+W       + +                   +  GL N S+
Sbjct: 11  VLFWIMGICLTCYLAGPPLFWALND--TLSSVSSSCPPCHCDCSLQPLLSIPEGLSNNSI 68

Query: 75  SDCGGNDPDLKEEMEKQFVDLLTEELKLQESVAEAHSRHMNITFAEAKRVGAQYQREADK 134
            DC   DP++ EE  K F+DLL EELK +E+ AE   RH +I   E+K++ +QYQ+EADK
Sbjct: 69  LDCMRQDPEVSEEAGKSFMDLLHEELKQKEAEAERKQRHADILLLESKKIASQYQKEADK 128

Query: 135 CIAATETCEQAREQAQAKFIKEKKMTLVWERRARQMGW 172
           C +  ETCE+ARE+A+     + K T +WE RA+Q GW
Sbjct: 129 CNSGMETCEEARERAETALENQMKETALWELRAQQRGW 166


>Medtr7g113900.1 | transmembrane protein, putative | HC |
           chr7:46958058-46956741 | 20130731
          Length = 164

 Score = 78.2 bits (191), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 53/161 (32%), Positives = 80/161 (49%), Gaps = 16/161 (9%)

Query: 13  LRWCLVLFAVVSALGVCGPALYWRFKKGIAIRAXXXXXXXXXXXXXXXXXFQVAPGLVNL 72
           L+W LV  +V   +   GP   WRFK+    +                           L
Sbjct: 17  LKWVLVWMSVCYIVFTIGPPSRWRFKQSPCPQCHHCYCSSVE---------------YPL 61

Query: 73  SVSDCGGNDPDLKEEMEKQFVDLLTEELKLQESVAEAHSRHMNITFAEAKRVGAQYQREA 132
              DCG +DP + EEM K  + +L+EELKLQ+ VA             A+   + Y++E 
Sbjct: 62  GSLDCGKHDPAM-EEMNKDPLSMLSEELKLQKIVANETLEQTKRLVINARNTFSHYKKEV 120

Query: 133 DKCIAATETCEQAREQAQAKFIKEKKMTLVWERRARQMGWE 173
           +KC    ETCE+ARE+A+A+ ++E+++T +WE RAR  GW+
Sbjct: 121 EKCSIGMETCEEARERAEAELVEERRLTALWEERARDYGWK 161


>Medtr4g106610.1 | transmembrane protein, putative | LC |
          chr4:44218842-44220540 | 20130731
          Length = 98

 Score = 60.5 bits (145), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 28/40 (70%), Positives = 32/40 (80%), Gaps = 2/40 (5%)

Query: 6  RSDSGIWLRWCLVLFAVVSALGVCGPALYWRFKKGIAIRA 45
          RS S  WLRWCLVLFA++SAL VCGPAL WRFK GI + +
Sbjct: 51 RSSS--WLRWCLVLFAMISALMVCGPALCWRFKNGITLNS 88