Miyakogusa Predicted Gene

Lj6g3v0608270.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v0608270.1 Non Characterized Hit- tr|B9SHY0|B9SHY0_RICCO
Putative uncharacterized protein OS=Ricinus communis G,35.93,5e-18,
,CUFF.58080.1
         (165 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g462910.1 | transmembrane protein, putative | LC | chr3:25...   170   5e-43
Medtr5g069750.1 | transmembrane protein, putative | HC | chr5:29...    73   1e-13
Medtr7g087490.1 | transmembrane protein, putative | HC | chr7:34...    70   6e-13
Medtr7g087490.2 | transmembrane protein, putative | HC | chr7:34...    70   6e-13
Medtr7g087490.3 | transmembrane protein, putative | HC | chr7:34...    70   8e-13

>Medtr3g462910.1 | transmembrane protein, putative | LC |
           chr3:25175552-25170350 | 20130731
          Length = 895

 Score =  170 bits (431), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 88/164 (53%), Positives = 109/164 (66%), Gaps = 16/164 (9%)

Query: 1   MPGSAPSYMPRSPYDIPYDPCEERPNLTEDSLLQEYTSN-QKDNITFCRHESFSLGPFNP 59
           MPGSAPS MPRSPYDIPY+P EERPNLT D  LQE+T +    ++ FCRHESF+LG    
Sbjct: 307 MPGSAPSIMPRSPYDIPYEPFEERPNLTGDGFLQEFTGHYHHKDVPFCRHESFNLGSDFS 366

Query: 60  SETNQDQGARGYYSFNQRRKYSDRLPYSRFRSHPDKGNHDWLIDQLLYNEGGENGSETPN 119
           SE+ Q++G R Y               SRF+S PDKGNHDWLIDQL+YNE GE   + P 
Sbjct: 367 SESRQERGTRSY---------------SRFKSLPDKGNHDWLIDQLIYNEEGELRIQEPK 411

Query: 120 PVSKGHETTHEENGKCETSVADMKVEEVENAHEAKSMSNQTSKS 163
           P++ G ET HEE+ KC+  + D+K  +V   H+ KSMS Q S+S
Sbjct: 412 PLNNGEETKHEEDEKCKPDMDDIKNVKVATDHDKKSMSGQISES 455


>Medtr5g069750.1 | transmembrane protein, putative | HC |
           chr5:29592334-29587798 | 20130731
          Length = 1043

 Score = 72.8 bits (177), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 59/162 (36%), Positives = 84/162 (51%), Gaps = 31/162 (19%)

Query: 1   MPGSAPSYMPRSPYDIPYDPCEERPNLTEDSLLQEYTSNQKDNITFCRHESFSLGPFNPS 60
           +PGSAPS + RSP+DIPY+P EERPNL  DS  QE+T++                     
Sbjct: 369 IPGSAPSVL-RSPFDIPYEPFEERPNLKWDSFDQEFTNDML------------------L 409

Query: 61  ETNQDQGARGYYSFNQRRKYSDRLPYSRFRSHPDKGNHDWLIDQLLYNEGGENGSETPNP 120
           E  QD   R            +R+P+SR R    + NHD   ++L   EG E+  + P+P
Sbjct: 410 ELRQDLHVR-----------ENRIPHSRVRRLSGRRNHDK-PEKLNSKEGSESELQAPSP 457

Query: 121 VSKGHETTHEENGKCETSVADMKVEEVENAHEAKSMSNQTSK 162
            +   ETTHEE  KC+  +  MK EEV+N+    ++S+  S+
Sbjct: 458 SNGEEETTHEEEEKCKIDIDGMKGEEVDNSDPTNAISDHASE 499


>Medtr7g087490.1 | transmembrane protein, putative | HC |
           chr7:34061823-34056369 | 20130731
          Length = 1395

 Score = 70.5 bits (171), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 36/59 (61%), Positives = 44/59 (74%), Gaps = 4/59 (6%)

Query: 1   MPGSAPSYMP--RSPYDIPYDPCEERPNLTEDSLLQEYTS-NQKDNITFCRHESFSLGP 56
           +PGSAPS +   R+P+DIPYDP EE+P+L  DS  QE+T  NQKD   F RHESFS+GP
Sbjct: 467 IPGSAPSILQPRRNPFDIPYDPNEEKPDLKRDSFQQEFTQFNQKDAF-FRRHESFSMGP 524


>Medtr7g087490.2 | transmembrane protein, putative | HC |
           chr7:34061823-34056369 | 20130731
          Length = 1384

 Score = 70.5 bits (171), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 36/59 (61%), Positives = 44/59 (74%), Gaps = 4/59 (6%)

Query: 1   MPGSAPSYMP--RSPYDIPYDPCEERPNLTEDSLLQEYTS-NQKDNITFCRHESFSLGP 56
           +PGSAPS +   R+P+DIPYDP EE+P+L  DS  QE+T  NQKD   F RHESFS+GP
Sbjct: 467 IPGSAPSILQPRRNPFDIPYDPNEEKPDLKRDSFQQEFTQFNQKDAF-FRRHESFSMGP 524


>Medtr7g087490.3 | transmembrane protein, putative | HC |
           chr7:34062331-34056348 | 20130731
          Length = 1062

 Score = 70.1 bits (170), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 36/59 (61%), Positives = 44/59 (74%), Gaps = 4/59 (6%)

Query: 1   MPGSAPSYMP--RSPYDIPYDPCEERPNLTEDSLLQEYTS-NQKDNITFCRHESFSLGP 56
           +PGSAPS +   R+P+DIPYDP EE+P+L  DS  QE+T  NQKD   F RHESFS+GP
Sbjct: 442 IPGSAPSILQPRRNPFDIPYDPNEEKPDLKRDSFQQEFTQFNQKDAF-FRRHESFSMGP 499