Miyakogusa Predicted Gene
- Lj6g3v0204550.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj6g3v0204550.1 Non Characterized Hit- tr|I1K677|I1K677_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.27558
PE,64.1,9e-18,ZF_RING_2,Zinc finger, RING-type; zf-RING_2,Zinc finger,
RING-type; RING/U-box,NULL; no description,,CUFF.57582.1
(96 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr3g081030.1 | RING-H2 zinc finger protein | HC | chr3:367017... 113 4e-26
Medtr3g081030.2 | RING-H2 zinc finger protein | HC | chr3:367017... 113 4e-26
Medtr8g063660.1 | RING-H2 finger protein ATL47 | HC | chr8:26668... 59 1e-09
Medtr8g063660.2 | RING-H2 finger protein ATL47 | HC | chr8:26668... 59 1e-09
Medtr4g056590.1 | zinc finger, C3HC4 type (RING finger) protein ... 57 3e-09
Medtr1g074190.1 | RING-H2 finger protein ATL16, putative | HC | ... 55 2e-08
Medtr4g030070.1 | zinc finger, C3HC4 type (RING finger) protein ... 55 2e-08
Medtr1g070140.1 | RING-H2 zinc finger protein | HC | chr1:308110... 54 3e-08
Medtr4g106680.1 | RING-H2 finger protein ATL47 | HC | chr4:44027... 53 8e-08
Medtr2g044570.1 | RING-H2 finger protein | HC | chr2:19351954-19... 53 8e-08
Medtr6g087150.1 | RING-H2 finger protein ATL4J | HC | chr6:33511... 52 9e-08
Medtr7g117540.1 | anaphase-promoting complex subunit 11 RING-H2 ... 52 9e-08
Medtr7g096690.1 | RING-H2 zinc finger protein | HC | chr7:388073... 52 2e-07
Medtr8g066780.1 | anaphase-promoting complex subunit 11 RING-H2 ... 52 2e-07
Medtr6g007737.1 | RING-H2 finger protein ATL47 | HC | chr6:18747... 51 2e-07
Medtr4g106960.5 | RING-finger ubiquitin ligase | HC | chr4:43964... 51 2e-07
Medtr3g110190.1 | RING-H2 finger protein ATL4J | HC | chr3:51190... 51 2e-07
Medtr7g113800.1 | RING-H2 zinc finger protein | HC | chr7:469012... 51 3e-07
Medtr1g082550.1 | zinc finger, C3HC4 type (RING finger) protein,... 50 3e-07
Medtr8g092840.1 | RING-H2 finger protein ATL1L | HC | chr8:38827... 50 3e-07
Medtr8g092960.1 | RING-H2 finger protein ATL1L | HC | chr8:38847... 50 3e-07
Medtr4g106960.1 | RING-finger ubiquitin ligase | HC | chr4:43964... 50 4e-07
Medtr4g106960.6 | RING-finger ubiquitin ligase | HC | chr4:43964... 50 4e-07
Medtr4g106960.3 | RING-finger ubiquitin ligase | HC | chr4:43964... 50 4e-07
Medtr8g009190.1 | RING zinc finger protein, putative | HC | chr8... 50 5e-07
Medtr4g063070.1 | zinc finger, C3HC4 type (RING finger) protein ... 50 5e-07
Medtr3g100400.1 | anaphase-promoting complex subunit 11 RING-H2 ... 50 5e-07
Medtr4g120270.1 | RING-H2 zinc finger protein | HC | chr4:498615... 50 6e-07
Medtr8g027745.1 | RING-H2 finger protein ATL21A, putative | HC |... 50 6e-07
Medtr2g090950.1 | anaphase-promoting complex subunit 11 RING-H2 ... 50 6e-07
Medtr1g043410.1 | RING-H2 zinc finger protein | HC | chr1:162945... 50 7e-07
Medtr4g106960.2 | RING-finger ubiquitin ligase | HC | chr4:43964... 49 8e-07
Medtr4g106960.4 | RING-finger ubiquitin ligase | HC | chr4:43964... 49 8e-07
Medtr8g023400.1 | zinc finger, C3HC4 type (RING finger) protein ... 49 8e-07
Medtr8g099495.1 | RING-H2 finger ATL21A-like protein | HC | chr8... 49 1e-06
Medtr5g064990.1 | RING-H2 zinc finger protein | HC | chr5:273198... 49 1e-06
Medtr3g099650.1 | RING-H2 zinc finger protein, putative | HC | c... 49 1e-06
Medtr2g061790.2 | zinc finger, C3HC4 type (RING finger) protein ... 49 1e-06
Medtr2g061790.1 | zinc finger, C3HC4 type (RING finger) protein ... 49 1e-06
Medtr5g064890.1 | RING-H2 zinc finger protein | HC | chr5:272674... 49 2e-06
Medtr3g095560.1 | RING-H2 zinc finger protein | HC | chr3:436665... 48 2e-06
Medtr1g492830.1 | anaphase-promoting complex subunit 11 RING-H2 ... 48 2e-06
Medtr3g012550.1 | zinc finger, C3HC4 type (RING finger) protein ... 48 2e-06
Medtr5g034790.1 | RING-H2 finger protein ATL47 | HC | chr5:15104... 48 3e-06
Medtr2g079320.1 | zinc finger, C3HC4 type (RING finger) protein ... 47 3e-06
Medtr2g090905.1 | anaphase-promoting complex subunit 11 RING-H2 ... 47 3e-06
Medtr4g129420.1 | RING-H2 finger protein ATL13, putative | HC | ... 47 3e-06
Medtr3g091620.1 | RING-H2 finger protein ATL4O | HC | chr3:41706... 47 3e-06
Medtr5g066250.1 | RING-H2 zinc finger protein | LC | chr5:279404... 47 4e-06
Medtr8g032690.1 | zinc finger, C3HC4 type (RING finger) protein ... 47 4e-06
Medtr7g116200.1 | zinc finger, C3HC4 type (RING finger) protein ... 47 5e-06
Medtr7g116210.1 | zinc finger, C3HC4 type (RING finger) protein ... 46 6e-06
Medtr7g059360.1 | anaphase-promoting complex subunit 11 RING-H2 ... 46 7e-06
Medtr8g099515.1 | RING-H2 finger protein ATL21A, putative | HC |... 46 7e-06
Medtr5g030010.1 | RING-H2 zinc finger protein | HC | chr5:126188... 46 8e-06
Medtr3g464780.1 | RING-H2 finger ATL2-like protein, putative | H... 46 8e-06
Medtr8g092970.1 | RING-H2 finger protein ATL1L | HC | chr8:38850... 46 9e-06
Medtr5g026730.1 | zinc finger, C3HC4 type (RING finger) protein ... 46 9e-06
>Medtr3g081030.1 | RING-H2 zinc finger protein | HC |
chr3:36701768-36703963 | 20130731
Length = 216
Score = 113 bits (283), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 63/96 (65%), Positives = 67/96 (69%), Gaps = 14/96 (14%)
Query: 1 MKEEVLQIPYCKHVFHIDCIHHWMQSNSTCPLCRCSIIPTTTKFLNPE-------SDPPQ 53
+KEE+LQIPYCKHVFHIDCIHHW+QSNSTCPLCRCSIIPT TKFLNP SDPP
Sbjct: 128 VKEELLQIPYCKHVFHIDCIHHWLQSNSTCPLCRCSIIPTITKFLNPAPPINIIISDPPH 187
Query: 54 QGAIISHSPLQVMSLLQPQREDEPSASSNTENFSRE 89
Q AI SPL SL D+ ASSN SRE
Sbjct: 188 QDAINLDSPLPNSSL-----PDQAGASSNI--MSRE 216
>Medtr3g081030.2 | RING-H2 zinc finger protein | HC |
chr3:36701768-36703966 | 20130731
Length = 216
Score = 113 bits (283), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 63/96 (65%), Positives = 67/96 (69%), Gaps = 14/96 (14%)
Query: 1 MKEEVLQIPYCKHVFHIDCIHHWMQSNSTCPLCRCSIIPTTTKFLNPE-------SDPPQ 53
+KEE+LQIPYCKHVFHIDCIHHW+QSNSTCPLCRCSIIPT TKFLNP SDPP
Sbjct: 128 VKEELLQIPYCKHVFHIDCIHHWLQSNSTCPLCRCSIIPTITKFLNPAPPINIIISDPPH 187
Query: 54 QGAIISHSPLQVMSLLQPQREDEPSASSNTENFSRE 89
Q AI SPL SL D+ ASSN SRE
Sbjct: 188 QDAINLDSPLPNSSL-----PDQAGASSNI--MSRE 216
>Medtr8g063660.1 | RING-H2 finger protein ATL47 | HC |
chr8:26668874-26670473 | 20130731
Length = 335
Score = 58.5 bits (140), Expect = 1e-09, Method: Composition-based stats.
Identities = 24/43 (55%), Positives = 27/43 (62%)
Query: 8 IPYCKHVFHIDCIHHWMQSNSTCPLCRCSIIPTTTKFLNPESD 50
+P C H FHIDCI W+ SNSTCPLCR S+ F NP D
Sbjct: 110 LPLCNHAFHIDCIDTWLLSNSTCPLCRGSLYEHGFAFENPVYD 152
>Medtr8g063660.2 | RING-H2 finger protein ATL47 | HC |
chr8:26668874-26670473 | 20130731
Length = 335
Score = 58.5 bits (140), Expect = 1e-09, Method: Composition-based stats.
Identities = 24/43 (55%), Positives = 27/43 (62%)
Query: 8 IPYCKHVFHIDCIHHWMQSNSTCPLCRCSIIPTTTKFLNPESD 50
+P C H FHIDCI W+ SNSTCPLCR S+ F NP D
Sbjct: 110 LPLCNHAFHIDCIDTWLLSNSTCPLCRGSLYEHGFAFENPVYD 152
>Medtr4g056590.1 | zinc finger, C3HC4 type (RING finger) protein |
HC | chr4:20790656-20791249 | 20130731
Length = 195
Score = 57.4 bits (137), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 22/36 (61%), Positives = 28/36 (77%)
Query: 3 EEVLQIPYCKHVFHIDCIHHWMQSNSTCPLCRCSII 38
EEV IPYCKHVFH +CI W+ ++ TCP+CRC I+
Sbjct: 134 EEVKMIPYCKHVFHAECIDTWLSAHVTCPICRCVIV 169
>Medtr1g074190.1 | RING-H2 finger protein ATL16, putative | HC |
chr1:32966192-32964538 | 20130731
Length = 348
Score = 54.7 bits (130), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 24/42 (57%), Positives = 31/42 (73%), Gaps = 1/42 (2%)
Query: 3 EEVLQIPYCKHVFHIDCIHHWMQSNSTCPLCRCSIIPTTTKF 44
E++ IP C HVFHIDCI W+Q+N+ CPLCR S I T++F
Sbjct: 142 EKLRIIPNCSHVFHIDCIDVWLQNNANCPLCRTS-ISLTSRF 182
>Medtr4g030070.1 | zinc finger, C3HC4 type (RING finger) protein |
HC | chr4:10364008-10366917 | 20130731
Length = 226
Score = 54.7 bits (130), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 29/40 (72%)
Query: 2 KEEVLQIPYCKHVFHIDCIHHWMQSNSTCPLCRCSIIPTT 41
++ + QIP C H FH+ CI W+ S+STCPLCR S++PT
Sbjct: 120 EDRLQQIPACGHTFHMSCIDLWLSSHSTCPLCRLSLLPTA 159
>Medtr1g070140.1 | RING-H2 zinc finger protein | HC |
chr1:30811056-30812078 | 20130731
Length = 340
Score = 54.3 bits (129), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 23/43 (53%), Positives = 31/43 (72%), Gaps = 1/43 (2%)
Query: 2 KEEVLQI-PYCKHVFHIDCIHHWMQSNSTCPLCRCSIIPTTTK 43
+++V++I P C H FH+DCI W+Q+NS CPLCR SI TT
Sbjct: 139 EQDVIKILPNCNHAFHLDCIDIWLQTNSNCPLCRSSISGNTTN 181
>Medtr4g106680.1 | RING-H2 finger protein ATL47 | HC |
chr4:44027481-44026190 | 20130731
Length = 308
Score = 52.8 bits (125), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 35/57 (61%)
Query: 2 KEEVLQIPYCKHVFHIDCIHHWMQSNSTCPLCRCSIIPTTTKFLNPESDPPQQGAII 58
+E++ +P C+H FH++C+ W+ SNSTCPLCR +I ++ N + Q II
Sbjct: 142 QEKLRLVPICRHAFHMNCLDTWLLSNSTCPLCRANISSSSFPLENVDDSLVSQREII 198
>Medtr2g044570.1 | RING-H2 finger protein | HC |
chr2:19351954-19350737 | 20130731
Length = 298
Score = 52.8 bits (125), Expect = 8e-08, Method: Composition-based stats.
Identities = 17/38 (44%), Positives = 25/38 (65%)
Query: 8 IPYCKHVFHIDCIHHWMQSNSTCPLCRCSIIPTTTKFL 45
+P C H FH +CI W+ SN TCPLCR S+ + ++ +
Sbjct: 99 LPLCCHAFHTECIDAWLSSNQTCPLCRSSVFASESEIM 136
>Medtr6g087150.1 | RING-H2 finger protein ATL4J | HC |
chr6:33511896-33513722 | 20130731
Length = 376
Score = 52.4 bits (124), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 19/32 (59%), Positives = 27/32 (84%), Gaps = 1/32 (3%)
Query: 4 EVLQI-PYCKHVFHIDCIHHWMQSNSTCPLCR 34
E+L++ P CKH FHIDCI HW++ +S+CP+CR
Sbjct: 130 EILRLLPKCKHAFHIDCIDHWLEKHSSCPICR 161
>Medtr7g117540.1 | anaphase-promoting complex subunit 11 RING-H2
finger protein | HC | chr7:48694259-48696277 | 20130731
Length = 289
Score = 52.4 bits (124), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 27/39 (69%)
Query: 2 KEEVLQIPYCKHVFHIDCIHHWMQSNSTCPLCRCSIIPT 40
E+V +P C H+FHIDCI W S+STCPLCR ++ T
Sbjct: 111 GEKVRVLPKCNHMFHIDCIDMWFHSHSTCPLCRTTLAAT 149
>Medtr7g096690.1 | RING-H2 zinc finger protein | HC |
chr7:38807386-38806219 | 20130731
Length = 324
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 47/93 (50%), Gaps = 9/93 (9%)
Query: 8 IPYCKHVFHIDCIHHWMQSNSTCPLCRCSIIPTT----TKFLNPESDPPQQGAIISHSPL 63
+P C H FH+DCI+ W+Q+N+ CPLCR SI T + + S PQ ++S+
Sbjct: 116 LPNCSHHFHLDCINIWLQTNANCPLCRTSISGNTQFPMNRIIAAPSSSPQDSQLLSNMGS 175
Query: 64 Q---VMSLLQPQREDEPSAS--SNTENFSRERM 91
V+ L E+ S S N SRER+
Sbjct: 176 DEDFVVIELWGDGENRGSRSQVQQDRNESRERL 208
>Medtr8g066780.1 | anaphase-promoting complex subunit 11 RING-H2
finger protein | HC | chr8:27772738-27770951 | 20130731
Length = 356
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 27/40 (67%)
Query: 3 EEVLQIPYCKHVFHIDCIHHWMQSNSTCPLCRCSIIPTTT 42
E V +P C HVFH+ CI W++SNS+CPLCR S+ +
Sbjct: 153 ESVRLLPMCNHVFHLPCIDTWLKSNSSCPLCRSSVFTSNA 192
>Medtr6g007737.1 | RING-H2 finger protein ATL47 | HC |
chr6:1874716-1871663 | 20130731
Length = 384
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 29/49 (59%)
Query: 2 KEEVLQIPYCKHVFHIDCIHHWMQSNSTCPLCRCSIIPTTTKFLNPESD 50
K+++ +P C H FHI CI W+ SNSTCPLCR ++ NP D
Sbjct: 169 KDKLRLLPMCSHAFHISCIDTWLLSNSTCPLCRGTLQTNGFSIENPIFD 217
>Medtr4g106960.5 | RING-finger ubiquitin ligase | HC |
chr4:43964225-43959467 | 20130731
Length = 407
Score = 51.2 bits (121), Expect = 2e-07, Method: Composition-based stats.
Identities = 29/97 (29%), Positives = 46/97 (47%), Gaps = 16/97 (16%)
Query: 4 EVLQIPYCKHVFHIDCIHHWMQSNSTCPLCRCSIIP----TTTKFLNPESDPPQQGAI-- 57
EV +P C H FH++CI W++ N CP CRCS+ P + L P+S+ +
Sbjct: 247 EVRGLP-CAHNFHVECIDEWLRLNVKCPRCRCSVFPNLDLSALSNLRPDSERSSDSVVTT 305
Query: 58 ---ISHSP------LQVMSLLQPQREDEPSASSNTEN 85
+ P L++ LL+P R + +T+N
Sbjct: 306 TRYVRGQPSSQSYLLRLQGLLRPVRTEIAGPVGDTDN 342
>Medtr3g110190.1 | RING-H2 finger protein ATL4J | HC |
chr3:51190946-51189912 | 20130731
Length = 344
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 28/33 (84%), Gaps = 1/33 (3%)
Query: 3 EEVLQI-PYCKHVFHIDCIHHWMQSNSTCPLCR 34
EE+L++ P CKH FH++CI W++S+STCPLCR
Sbjct: 102 EEILRLLPKCKHAFHMNCIDKWLESHSTCPLCR 134
>Medtr7g113800.1 | RING-H2 zinc finger protein | HC |
chr7:46901295-46899362 | 20130731
Length = 361
Score = 50.8 bits (120), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 27/37 (72%)
Query: 3 EEVLQIPYCKHVFHIDCIHHWMQSNSTCPLCRCSIIP 39
E + IP C HVFH +CI W+ S++TCP+CR +++P
Sbjct: 131 ETLRLIPKCDHVFHPECIDEWLSSHTTCPVCRANLVP 167
>Medtr1g082550.1 | zinc finger, C3HC4 type (RING finger) protein,
putative | HC | chr1:36736012-36737619 | 20130731
Length = 373
Score = 50.4 bits (119), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 27/37 (72%)
Query: 3 EEVLQIPYCKHVFHIDCIHHWMQSNSTCPLCRCSIIP 39
E + IP C HVFH +CI W+ S++TCP+CR +++P
Sbjct: 138 ETLRLIPKCDHVFHPECIDEWLGSHTTCPVCRANLVP 174
>Medtr8g092840.1 | RING-H2 finger protein ATL1L | HC |
chr8:38827649-38826753 | 20130731
Length = 228
Score = 50.4 bits (119), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 32/50 (64%)
Query: 3 EEVLQIPYCKHVFHIDCIHHWMQSNSTCPLCRCSIIPTTTKFLNPESDPP 52
E+V +P C H FH+ CI W++S+S+CP CR ++ T K + E+ PP
Sbjct: 151 EKVRILPKCNHGFHVRCIDKWLKSHSSCPKCRQCLLETCRKIVGSEAPPP 200
>Medtr8g092960.1 | RING-H2 finger protein ATL1L | HC |
chr8:38847240-38846364 | 20130731
Length = 218
Score = 50.4 bits (119), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 32/50 (64%)
Query: 3 EEVLQIPYCKHVFHIDCIHHWMQSNSTCPLCRCSIIPTTTKFLNPESDPP 52
E+V +P C H FH+ CI W++S+S+CP CR ++ T K + E+ PP
Sbjct: 141 EKVRILPKCNHGFHVRCIDKWLKSHSSCPKCRQCLLETCRKIVGSEAPPP 190
>Medtr4g106960.1 | RING-finger ubiquitin ligase | HC |
chr4:43964225-43959467 | 20130731
Length = 380
Score = 50.4 bits (119), Expect = 4e-07, Method: Composition-based stats.
Identities = 29/97 (29%), Positives = 46/97 (47%), Gaps = 16/97 (16%)
Query: 4 EVLQIPYCKHVFHIDCIHHWMQSNSTCPLCRCSIIP----TTTKFLNPESDPPQQGAI-- 57
EV +P C H FH++CI W++ N CP CRCS+ P + L P+S+ +
Sbjct: 247 EVRGLP-CAHNFHVECIDEWLRLNVKCPRCRCSVFPNLDLSALSNLRPDSERSSDSVVTT 305
Query: 58 ---ISHSP------LQVMSLLQPQREDEPSASSNTEN 85
+ P L++ LL+P R + +T+N
Sbjct: 306 TRYVRGQPSSQSYLLRLQGLLRPVRTEIAGPVGDTDN 342
>Medtr4g106960.6 | RING-finger ubiquitin ligase | HC |
chr4:43964225-43959467 | 20130731
Length = 350
Score = 50.4 bits (119), Expect = 4e-07, Method: Composition-based stats.
Identities = 29/97 (29%), Positives = 46/97 (47%), Gaps = 16/97 (16%)
Query: 4 EVLQIPYCKHVFHIDCIHHWMQSNSTCPLCRCSIIP----TTTKFLNPESDPPQQGAI-- 57
EV +P C H FH++CI W++ N CP CRCS+ P + L P+S+ +
Sbjct: 190 EVRGLP-CAHNFHVECIDEWLRLNVKCPRCRCSVFPNLDLSALSNLRPDSERSSDSVVTT 248
Query: 58 ---ISHSP------LQVMSLLQPQREDEPSASSNTEN 85
+ P L++ LL+P R + +T+N
Sbjct: 249 TRYVRGQPSSQSYLLRLQGLLRPVRTEIAGPVGDTDN 285
>Medtr4g106960.3 | RING-finger ubiquitin ligase | HC |
chr4:43964225-43958809 | 20130731
Length = 380
Score = 50.4 bits (119), Expect = 4e-07, Method: Composition-based stats.
Identities = 29/97 (29%), Positives = 46/97 (47%), Gaps = 16/97 (16%)
Query: 4 EVLQIPYCKHVFHIDCIHHWMQSNSTCPLCRCSIIP----TTTKFLNPESDPPQQGAI-- 57
EV +P C H FH++CI W++ N CP CRCS+ P + L P+S+ +
Sbjct: 247 EVRGLP-CAHNFHVECIDEWLRLNVKCPRCRCSVFPNLDLSALSNLRPDSERSSDSVVTT 305
Query: 58 ---ISHSP------LQVMSLLQPQREDEPSASSNTEN 85
+ P L++ LL+P R + +T+N
Sbjct: 306 TRYVRGQPSSQSYLLRLQGLLRPVRTEIAGPVGDTDN 342
>Medtr8g009190.1 | RING zinc finger protein, putative | HC |
chr8:2065221-2064020 | 20130731
Length = 316
Score = 50.1 bits (118), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 26/38 (68%)
Query: 7 QIPYCKHVFHIDCIHHWMQSNSTCPLCRCSIIPTTTKF 44
+P C H FH +CI W++SN +CPLCR SI+P+ +
Sbjct: 120 SLPLCCHAFHAECIDTWLRSNLSCPLCRASILPSDSDL 157
>Medtr4g063070.1 | zinc finger, C3HC4 type (RING finger) protein |
HC | chr4:23325580-23322150 | 20130731
Length = 396
Score = 50.1 bits (118), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 24/36 (66%)
Query: 3 EEVLQIPYCKHVFHIDCIHHWMQSNSTCPLCRCSII 38
E V +P C H FH+ CI W QS+S CPLCRC ++
Sbjct: 347 EWVKHLPICTHSFHVSCIDKWFQSHSNCPLCRCHVL 382
>Medtr3g100400.1 | anaphase-promoting complex subunit 11 RING-H2
finger protein | HC | chr3:46169451-46168093 | 20130731
Length = 411
Score = 50.1 bits (118), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 28/37 (75%), Gaps = 1/37 (2%)
Query: 4 EVLQI-PYCKHVFHIDCIHHWMQSNSTCPLCRCSIIP 39
EVL++ P CKH FH++C+ W+ ++STCPLCR + P
Sbjct: 167 EVLRLLPKCKHAFHVECVDTWLDAHSTCPLCRYRVDP 203
>Medtr4g120270.1 | RING-H2 zinc finger protein | HC |
chr4:49861539-49862357 | 20130731
Length = 272
Score = 49.7 bits (117), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 22/30 (73%)
Query: 8 IPYCKHVFHIDCIHHWMQSNSTCPLCRCSI 37
+P C H FHIDCI W QS+STCPLCR +
Sbjct: 120 LPKCNHSFHIDCIDMWFQSHSTCPLCRAPV 149
>Medtr8g027745.1 | RING-H2 finger protein ATL21A, putative | HC |
chr8:10054672-10058064 | 20130731
Length = 371
Score = 49.7 bits (117), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 22/39 (56%), Positives = 26/39 (66%)
Query: 2 KEEVLQIPYCKHVFHIDCIHHWMQSNSTCPLCRCSIIPT 40
KE V IP CKH FH DCI W++ N TCP+CR S P+
Sbjct: 324 KETVRCIPECKHCFHADCIDEWLRMNVTCPVCRNSPAPS 362
>Medtr2g090950.1 | anaphase-promoting complex subunit 11 RING-H2
finger protein | HC | chr2:39066658-39065308 | 20130731
Length = 239
Score = 49.7 bits (117), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 40/66 (60%), Gaps = 8/66 (12%)
Query: 3 EEVLQI-PYCKHVFHIDCIHHWMQSNSTCPLCRCSIIPTTTKFLNPESDPPQQGAIISHS 61
EE++++ P CKH FH+ CI W+ S+STCP CR + P PE++ P++G + S
Sbjct: 133 EEMMRLLPNCKHSFHVGCIDKWLASHSTCPNCRTKVEP------RPEAE-PREGPTLFIS 185
Query: 62 PLQVMS 67
P + S
Sbjct: 186 PSEGTS 191
>Medtr1g043410.1 | RING-H2 zinc finger protein | HC |
chr1:16294568-16295633 | 20130731
Length = 321
Score = 49.7 bits (117), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 18/32 (56%), Positives = 25/32 (78%)
Query: 3 EEVLQIPYCKHVFHIDCIHHWMQSNSTCPLCR 34
E++ IP C H+FHIDC+ W+Q+N+ CPLCR
Sbjct: 134 EKLRVIPNCNHLFHIDCVDIWLQNNANCPLCR 165
>Medtr4g106960.2 | RING-finger ubiquitin ligase | HC |
chr4:43964225-43959467 | 20130731
Length = 323
Score = 49.3 bits (116), Expect = 8e-07, Method: Composition-based stats.
Identities = 29/97 (29%), Positives = 46/97 (47%), Gaps = 16/97 (16%)
Query: 4 EVLQIPYCKHVFHIDCIHHWMQSNSTCPLCRCSIIP----TTTKFLNPESDPPQQGAI-- 57
EV +P C H FH++CI W++ N CP CRCS+ P + L P+S+ +
Sbjct: 190 EVRGLP-CAHNFHVECIDEWLRLNVKCPRCRCSVFPNLDLSALSNLRPDSERSSDSVVTT 248
Query: 58 ---ISHSP------LQVMSLLQPQREDEPSASSNTEN 85
+ P L++ LL+P R + +T+N
Sbjct: 249 TRYVRGQPSSQSYLLRLQGLLRPVRTEIAGPVGDTDN 285
>Medtr4g106960.4 | RING-finger ubiquitin ligase | HC |
chr4:43964225-43958809 | 20130731
Length = 323
Score = 49.3 bits (116), Expect = 8e-07, Method: Composition-based stats.
Identities = 29/97 (29%), Positives = 46/97 (47%), Gaps = 16/97 (16%)
Query: 4 EVLQIPYCKHVFHIDCIHHWMQSNSTCPLCRCSIIP----TTTKFLNPESDPPQQGAI-- 57
EV +P C H FH++CI W++ N CP CRCS+ P + L P+S+ +
Sbjct: 190 EVRGLP-CAHNFHVECIDEWLRLNVKCPRCRCSVFPNLDLSALSNLRPDSERSSDSVVTT 248
Query: 58 ---ISHSP------LQVMSLLQPQREDEPSASSNTEN 85
+ P L++ LL+P R + +T+N
Sbjct: 249 TRYVRGQPSSQSYLLRLQGLLRPVRTEIAGPVGDTDN 285
>Medtr8g023400.1 | zinc finger, C3HC4 type (RING finger) protein |
HC | chr8:8435238-8433493 | 20130731
Length = 321
Score = 49.3 bits (116), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 19/32 (59%), Positives = 23/32 (71%)
Query: 3 EEVLQIPYCKHVFHIDCIHHWMQSNSTCPLCR 34
E+ +P C H FH+DCI W QS+STCPLCR
Sbjct: 128 EKTRLLPKCNHGFHLDCIDMWFQSHSTCPLCR 159
>Medtr8g099495.1 | RING-H2 finger ATL21A-like protein | HC |
chr8:42002556-42004293 | 20130731
Length = 408
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 26/33 (78%), Gaps = 1/33 (3%)
Query: 3 EEVLQ-IPYCKHVFHIDCIHHWMQSNSTCPLCR 34
EVL+ IP C H FH++CI W+++N+TCPLCR
Sbjct: 357 NEVLRTIPECNHYFHVNCIDGWLKTNATCPLCR 389
>Medtr5g064990.1 | RING-H2 zinc finger protein | HC |
chr5:27319869-27321352 | 20130731
Length = 385
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 26/39 (66%)
Query: 3 EEVLQIPYCKHVFHIDCIHHWMQSNSTCPLCRCSIIPTT 41
E + IP C HVFH DC+ W+ +STCP+CR ++P +
Sbjct: 154 ETLRLIPNCSHVFHRDCVDVWLLHHSTCPVCRAELVPGS 192
>Medtr3g099650.1 | RING-H2 zinc finger protein, putative | HC |
chr3:45686700-45688504 | 20130731
Length = 377
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 26/37 (70%)
Query: 3 EEVLQIPYCKHVFHIDCIHHWMQSNSTCPLCRCSIIP 39
E + IP C HVFH C+ W+ ++STCP+CR ++IP
Sbjct: 147 ETLRLIPNCSHVFHSQCVDAWLVNHSTCPVCRANLIP 183
>Medtr2g061790.2 | zinc finger, C3HC4 type (RING finger) protein |
HC | chr2:26203975-26200057 | 20130731
Length = 230
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 27/38 (71%), Gaps = 1/38 (2%)
Query: 1 MKEEVLQIPYCKHVFHIDCIHHWMQSNSTCPLCRCSII 38
+ EE Q+P C H++H DCI W++ S+CPLCRC I+
Sbjct: 118 VDEEAKQLP-CDHLYHADCITPWLRIRSSCPLCRCGIV 154
>Medtr2g061790.1 | zinc finger, C3HC4 type (RING finger) protein |
HC | chr2:26203975-26200065 | 20130731
Length = 230
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 27/38 (71%), Gaps = 1/38 (2%)
Query: 1 MKEEVLQIPYCKHVFHIDCIHHWMQSNSTCPLCRCSII 38
+ EE Q+P C H++H DCI W++ S+CPLCRC I+
Sbjct: 118 VDEEAKQLP-CDHLYHADCITPWLRIRSSCPLCRCGIV 154
>Medtr5g064890.1 | RING-H2 zinc finger protein | HC |
chr5:27267475-27269210 | 20130731
Length = 352
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 42/83 (50%), Gaps = 8/83 (9%)
Query: 3 EEVLQIPYCKHVFHIDCIHHWMQSNSTCPLCRCSIIPTTTKFLNPESDPP---QQGAIIS 59
E + +P C H FHI CI W++S++ CPLCR I+ + PE P Q+ I+
Sbjct: 165 ETLRLLPKCSHAFHISCIDTWLRSHTNCPLCRAGIVSNN---VTPEVTIPNSEQENNILG 221
Query: 60 HSPLQVMSLLQPQREDEPSASSN 82
+ Q L P+ + E S+N
Sbjct: 222 RN--QETHLENPRNDQEDVLSNN 242
>Medtr3g095560.1 | RING-H2 zinc finger protein | HC |
chr3:43666563-43665579 | 20130731
Length = 240
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 41/80 (51%), Gaps = 8/80 (10%)
Query: 3 EEVLQIPYCKHVFHIDCIHHWMQSNSTCPLCRCSIIPTTTKFLNPESDP--------PQQ 54
++V +P C H FH+ CI W+ S+S+CP CR +I T K + + P
Sbjct: 147 DKVRLLPKCNHGFHVRCIDKWLSSHSSCPKCRQCLIETCNKIVGSQGSSSQPQPMLFPVP 206
Query: 55 GAIISHSPLQVMSLLQPQRE 74
I++ +PL+ L++ RE
Sbjct: 207 ETIVTIAPLEPEGLVRNYRE 226
>Medtr1g492830.1 | anaphase-promoting complex subunit 11 RING-H2
finger protein | HC | chr1:41629633-41626608 | 20130731
Length = 224
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 32/48 (66%), Gaps = 3/48 (6%)
Query: 3 EEVLQI-PYCKHVFHIDCIHHWMQSNSTCPLCRCSI--IPTTTKFLNP 47
E+ L+I P+C H FH+ CI W+Q N+TCP+CR S+ TT+ + P
Sbjct: 98 EDTLRILPHCGHSFHMACIDLWLQQNATCPVCRVSLREFSETTRSMQP 145
>Medtr3g012550.1 | zinc finger, C3HC4 type (RING finger) protein |
HC | chr3:3544102-3543415 | 20130731
Length = 177
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 32/51 (62%), Gaps = 2/51 (3%)
Query: 2 KEEVLQIPYCKHVFHIDCIHHWMQSNSTCPLCRCSIIPT--TTKFLNPESD 50
KE + +P C+H FH DC+ W++ ++TCPLCR S P+ TT P S+
Sbjct: 118 KETIRCVPDCQHCFHADCVDEWLKMSATCPLCRNSPAPSPITTPVATPLSE 168
>Medtr5g034790.1 | RING-H2 finger protein ATL47 | HC |
chr5:15104324-15102955 | 20130731
Length = 368
Score = 47.8 bits (112), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 27/43 (62%)
Query: 2 KEEVLQIPYCKHVFHIDCIHHWMQSNSTCPLCRCSIIPTTTKF 44
++++ +P C H FHI CI W+ SNS+CPLCR ++ F
Sbjct: 152 QDKLRLLPNCNHAFHISCIDTWLLSNSSCPLCRNTLYSQGFSF 194
>Medtr2g079320.1 | zinc finger, C3HC4 type (RING finger) protein |
HC | chr2:33387854-33387167 | 20130731
Length = 204
Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 17/27 (62%), Positives = 20/27 (74%)
Query: 8 IPYCKHVFHIDCIHHWMQSNSTCPLCR 34
P CKH+FH DCI HW+Q TCP+CR
Sbjct: 175 FPVCKHIFHSDCIDHWLQRKLTCPICR 201
>Medtr2g090905.1 | anaphase-promoting complex subunit 11 RING-H2
finger protein | LC | chr2:39032400-39032017 | 20130731
Length = 127
Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 28/38 (73%), Gaps = 1/38 (2%)
Query: 3 EEVLQI-PYCKHVFHIDCIHHWMQSNSTCPLCRCSIIP 39
EE++++ P CKH FH+ CI W+ S+STCP+CR + P
Sbjct: 81 EEMMRLLPNCKHSFHVGCIDKWLASHSTCPICRTKVEP 118
>Medtr4g129420.1 | RING-H2 finger protein ATL13, putative | HC |
chr4:53903277-53901249 | 20130731
Length = 511
Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 28/37 (75%)
Query: 2 KEEVLQIPYCKHVFHIDCIHHWMQSNSTCPLCRCSII 38
++++ +P C H FH++CI W+ S+STCPLCR +++
Sbjct: 154 EDKLRLLPKCSHAFHMECIDTWLLSHSTCPLCRANLL 190
>Medtr3g091620.1 | RING-H2 finger protein ATL4O | HC |
chr3:41706796-41703898 | 20130731
Length = 358
Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 25/36 (69%)
Query: 3 EEVLQIPYCKHVFHIDCIHHWMQSNSTCPLCRCSII 38
+ V +P C H FH+DCI W++S++ CPLCR ++
Sbjct: 138 DYVRTLPLCSHTFHLDCIDAWLRSHANCPLCRSLLL 173
>Medtr5g066250.1 | RING-H2 zinc finger protein | LC |
chr5:27940400-27939099 | 20130731
Length = 433
Score = 47.0 bits (110), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 27/37 (72%), Gaps = 1/37 (2%)
Query: 4 EVLQI-PYCKHVFHIDCIHHWMQSNSTCPLCRCSIIP 39
+VL++ P CKH FH++C+ W+ +S+CPLCR + P
Sbjct: 171 DVLRLLPKCKHAFHMECVDMWLDEHSSCPLCRYKVNP 207
>Medtr8g032690.1 | zinc finger, C3HC4 type (RING finger) protein |
HC | chr8:12543982-12545626 | 20130731
Length = 108
Score = 47.0 bits (110), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 25/36 (69%)
Query: 2 KEEVLQIPYCKHVFHIDCIHHWMQSNSTCPLCRCSI 37
KE + IPYC H FH+ CI W++ STCP+CR ++
Sbjct: 29 KEILRIIPYCGHTFHLSCIDMWLRKQSTCPVCRLTL 64
>Medtr7g116200.1 | zinc finger, C3HC4 type (RING finger) protein |
HC | chr7:47906855-47905875 | 20130731
Length = 172
Score = 46.6 bits (109), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 23/33 (69%)
Query: 2 KEEVLQIPYCKHVFHIDCIHHWMQSNSTCPLCR 34
+ V +P C H+FH DCI W++SN+ CPLCR
Sbjct: 103 NDHVRTLPLCSHIFHHDCIDVWLRSNTNCPLCR 135
>Medtr7g116210.1 | zinc finger, C3HC4 type (RING finger) protein |
HC | chr7:47908991-47908647 | 20130731
Length = 114
Score = 46.2 bits (108), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 23/33 (69%)
Query: 2 KEEVLQIPYCKHVFHIDCIHHWMQSNSTCPLCR 34
+ V +P C H+FH DCI W++SN+ CPLCR
Sbjct: 45 NDHVRTLPLCSHIFHHDCIDVWLRSNTNCPLCR 77
>Medtr7g059360.1 | anaphase-promoting complex subunit 11 RING-H2
finger protein | HC | chr7:21513610-21514532 | 20130731
Length = 234
Score = 46.2 bits (108), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 24/41 (58%)
Query: 2 KEEVLQIPYCKHVFHIDCIHHWMQSNSTCPLCRCSIIPTTT 42
EEV Q+ CKH FH CI W+ ++ CP+CR ++ P
Sbjct: 168 GEEVRQLSVCKHSFHTSCIDLWLNDHNNCPICRKTVTPAAA 208
>Medtr8g099515.1 | RING-H2 finger protein ATL21A, putative | HC |
chr8:42009468-42013480 | 20130731
Length = 408
Score = 46.2 bits (108), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 21/33 (63%)
Query: 2 KEEVLQIPYCKHVFHIDCIHHWMQSNSTCPLCR 34
KE + IP C H FH CI W++ N TCP+CR
Sbjct: 347 KETLRSIPECNHYFHAACIDEWLKMNGTCPICR 379
>Medtr5g030010.1 | RING-H2 zinc finger protein | HC |
chr5:12618874-12617075 | 20130731
Length = 372
Score = 45.8 bits (107), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 24/36 (66%)
Query: 3 EEVLQIPYCKHVFHIDCIHHWMQSNSTCPLCRCSII 38
E + +P C H FH+ CI W++S+S CPLCR +I
Sbjct: 159 ESIRLLPKCSHAFHLPCIDTWLKSHSNCPLCRATIF 194
>Medtr3g464780.1 | RING-H2 finger ATL2-like protein, putative | HC |
chr3:26087701-26088665 | 20130731
Length = 258
Score = 45.8 bits (107), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 23/31 (74%)
Query: 8 IPYCKHVFHIDCIHHWMQSNSTCPLCRCSII 38
+P C H FH++CI W+ S+S CP+CR SI+
Sbjct: 148 LPKCGHGFHLECIDMWLSSHSNCPICRASIV 178
>Medtr8g092970.1 | RING-H2 finger protein ATL1L | HC |
chr8:38850514-38851359 | 20130731
Length = 217
Score = 45.8 bits (107), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 41/77 (53%), Gaps = 4/77 (5%)
Query: 2 KEEVLQI-PYCKHVFHIDCIHHWMQSNSTCPLCRCSIIPTTTKFLNPESDP---PQQGAI 57
K E L+I P C H FH+ CI W++ +S+CP CR ++ T K + P P I
Sbjct: 140 KGEKLRILPKCNHGFHVRCIDKWLKEHSSCPKCRQCLLETCRKIGGSQVQPIVLPVPETI 199
Query: 58 ISHSPLQVMSLLQPQRE 74
I+ PL+ +L + RE
Sbjct: 200 ITIQPLEPQALERNYRE 216
>Medtr5g026730.1 | zinc finger, C3HC4 type (RING finger) protein |
HC | chr5:11035604-11036209 | 20130731
Length = 175
Score = 45.8 bits (107), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 25/39 (64%)
Query: 2 KEEVLQIPYCKHVFHIDCIHHWMQSNSTCPLCRCSIIPT 40
EE+ +P C H FH+ CI W+ S+S CP+CR S P+
Sbjct: 104 GEELRTMPECLHSFHVSCIDMWLHSHSNCPVCRSSTAPS 142