Miyakogusa Predicted Gene

Lj5g3v2292590.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v2292590.1 Non Characterized Hit- tr|E9JD82|E9JD82_SOLIN
Putative uncharacterized protein (Fragment)
OS=Solenop,35.9,0.0000000000002,FGFR1 ONCOGENE PARTNER/LISH
DOMAIN-CONTAINING PROTEIN,NULL; LISH,LisH dimerisation motif;
seg,NULL,CUFF.57229.1
         (265 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g116240.1 | tonneau protein 1b | HC | chr1:52544442-525477...   483   e-137

>Medtr1g116240.1 | tonneau protein 1b | HC | chr1:52544442-52547733
           | 20130731
          Length = 265

 Score =  483 bits (1243), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 234/263 (88%), Positives = 244/263 (92%)

Query: 1   MDDYTREMMDLKTLVTRTLEKKGVLARIRAELRASVFEAIEEEDRVVEKEQGLPPALLGS 60
           MDDYTREMMDLKTLVTRTLEKKGVLARIRAELRASVFEAIEEEDRV+EK+Q LPPALLGS
Sbjct: 1   MDDYTREMMDLKTLVTRTLEKKGVLARIRAELRASVFEAIEEEDRVIEKDQALPPALLGS 60

Query: 61  CNDRAKQLHASPSGRLLTALICEYLDWAQLNHTLKVYLPECNLEKDFWKAELKEFSSKNG 120
           CNDRAKQLHASPSGRLLTALICEYLDWAQLNH+LKVYLPECNLEKD WK+ELKEFSSKNG
Sbjct: 61  CNDRAKQLHASPSGRLLTALICEYLDWAQLNHSLKVYLPECNLEKDSWKSELKEFSSKNG 120

Query: 121 YDLNRNGDSPVLLDVLEGFLKFENLSQARASGRRFTTSEAEPLPNXXXXXXXXXXXXXVA 180
           YDLNRNGD+PVLLDVLEGFLKFENLSQARASGRR TTS+ EPLPN             VA
Sbjct: 121 YDLNRNGDAPVLLDVLEGFLKFENLSQARASGRRLTTSDTEPLPNSESRNTRRHSSSSVA 180

Query: 181 GGLPPLGRAVPSSQASDRRGGSSTSSYRKDEYNWRYDSDELPDDVIQASTALENLQLDRK 240
           GGLPPLGRAVPSSQASDRRGG S SSYRKDEYNWRYDSDELP+DVIQAS+ALENLQLDRK
Sbjct: 181 GGLPPLGRAVPSSQASDRRGGPSASSYRKDEYNWRYDSDELPEDVIQASSALENLQLDRK 240

Query: 241 ARNLTSSWRHAGDGINEDDGRAD 263
           ARNLTSSWRHAGDG++EDDGRAD
Sbjct: 241 ARNLTSSWRHAGDGMSEDDGRAD 263