Miyakogusa Predicted Gene

Lj5g3v1988590.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1988590.1 Non Characterized Hit- tr|I3SIU2|I3SIU2_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,100,0,NAD(P)-binding Rossmann-fold domains,NULL; no
description,NAD(P)-binding domain; ORNITHINE CYCLODEAM,CUFF.56410.1
         (329 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g099620.1 | ornithine cyclodeaminase/mu-crystallin | HC | ...   508   e-144

>Medtr1g099620.1 | ornithine cyclodeaminase/mu-crystallin | HC |
           chr1:44998651-44997422 | 20130731
          Length = 336

 Score =  508 bits (1309), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 250/326 (76%), Positives = 278/326 (85%), Gaps = 4/326 (1%)

Query: 3   SSSPVFIPTETLSTILTHKTLINHFQTNLPKVSTYLQTPIRQSYNVXXXXXXXXXXXXXX 62
           SSSP+FI TE L TILTH+TLINH Q+NLPK ST+LQTPIRQ YN+              
Sbjct: 12  SSSPIFISTENLRTILTHQTLINHIQSNLPKASTFLQTPIRQHYNLSPSSSLLLMPSWSS 71

Query: 63  XXXFPFIGVKLVTHFPQNSAFNLPGVQGSYVLFSSETGQTLASMDCTELTLYRTACVSGL 122
              FP+IGVKLVTHFP+NS+ NLPGVQGSYVLF+S TGQTLASMD TELTLYRT+CVSGL
Sbjct: 72  TPSFPYIGVKLVTHFPENSSQNLPGVQGSYVLFNSTTGQTLASMDSTELTLYRTSCVSGL 131

Query: 123 ASRYLSRDDSEVLVMVGSGSLAPHLIRAHLSARPSLRKVVIWNRTVEKAASLAEKLRECG 182
           AS+YL+RDDSE+LVMVG+G+LAPHLI+AH SARPSL++V IWNRTVEKA +LA+KL E  
Sbjct: 132 ASKYLARDDSEILVMVGAGALAPHLIKAHFSARPSLKRVFIWNRTVEKAKTLAKKLSESD 191

Query: 183 EF--EEVSFEGCGCGCLDEVVGSGDIVSCATNSEEALVKGERLKDGAHLDLVGSFKHSMK 240
           EF    +SFEGCG   LDEVVG GDIVSCATNSE ALVKGERLK GAHLDLVGSFKHSMK
Sbjct: 192 EFPLSGLSFEGCGN--LDEVVGFGDIVSCATNSEAALVKGERLKVGAHLDLVGSFKHSMK 249

Query: 241 ECDDEAIRRGKVFVDNEAALVEAGELVGAFDRGVIKEDEIGGTLLELTSGEKAGRSSSEQ 300
           ECDDEA++RGKVFVDNEAALVEAGELVGAF+RGVIKEDEIGG LLEL  G+K GRSSSE+
Sbjct: 250 ECDDEALKRGKVFVDNEAALVEAGELVGAFERGVIKEDEIGGNLLELIRGDKVGRSSSEE 309

Query: 301 VTVFKSVGSAVVDMLAAQFVYEAYMQ 326
           +TVFKSVGSAVVDMLAAQFVYE Y +
Sbjct: 310 ITVFKSVGSAVVDMLAAQFVYETYTR 335