Miyakogusa Predicted Gene
- Lj5g3v1666250.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj5g3v1666250.1 tr|A2Q4W6|A2Q4W6_MEDTR RNA-binding region RNP-1
(RNA recognition motif) OS=Medicago truncatula GN=Mt,21.31,2e-18,no
description,Nucleotide-binding, alpha-beta plait; RNA recognition
motif,RNA recognition motif dom,CUFF.55678.1
(369 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr5g065250.1 | RNA recognition motif, a.k.a. RRM, RBD protein... 120 2e-27
Medtr7g108440.1 | endonuclease/exonuclease/phosphatase family pr... 98 1e-20
Medtr4g061950.1 | RNA recognition motif, a.k.a. RRM, RBD protein... 98 1e-20
Medtr1g033680.1 | DUF4283 domain protein | LC | chr1:12165843-12... 97 2e-20
Medtr8g470180.1 | hypothetical protein | LC | chr8:25648349-2565... 87 3e-17
Medtr2g103400.1 | DUF4283 domain protein | LC | chr2:44519115-44... 76 5e-14
Medtr1148s0010.1 | DUF4283 domain protein | LC | scaffold1148:29... 70 2e-12
Medtr5g053650.1 | DUF4283 domain protein | LC | chr5:22104331-22... 70 4e-12
Medtr1g024800.1 | DUF4283 domain protein | LC | chr1:7950150-795... 69 6e-12
Medtr5g073130.1 | DUF4283 domain protein | LC | chr5:31119102-31... 66 5e-11
Medtr2g060030.1 | RNA recognition motif, a.k.a. RRM, RBD protein... 62 6e-10
Medtr4g005250.1 | DUF4283 domain protein | LC | chr4:141735-1402... 59 1e-08
Medtr6g053340.1 | DUF4283 domain protein | LC | chr6:19165882-19... 55 1e-07
Medtr3g048390.1 | DUF4283 domain protein | LC | chr3:17919204-17... 54 3e-07
Medtr0073s0040.1 | DUF4283 domain protein | LC | scaffold0073:22... 54 3e-07
Medtr8g058470.1 | DUF4283 domain protein | LC | chr8:20135093-20... 54 3e-07
Medtr7g108760.1 | DUF4283 domain protein | LC | chr7:44356978-44... 54 4e-07
Medtr7g104745.1 | hypothetical protein | LC | chr7:42466146-4246... 53 5e-07
Medtr7g083690.1 | endonuclease/exonuclease/phosphatase family pr... 52 7e-07
Medtr5g055560.1 | RNA recognition motif, a.k.a. RRM, RBD protein... 50 3e-06
Medtr7g073570.1 | DUF4283 domain protein | LC | chr7:27505208-27... 50 4e-06
Medtr6g024400.1 | DUF4283 domain protein | LC | chr6:8739492-873... 50 4e-06
Medtr8g045280.1 | DUF4283 domain protein | LC | chr8:17686445-17... 49 1e-05
>Medtr5g065250.1 | RNA recognition motif, a.k.a. RRM, RBD protein |
LC | chr5:27420597-27418392 | 20130731
Length = 654
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 94/306 (30%), Positives = 143/306 (46%), Gaps = 42/306 (13%)
Query: 23 MWRFFEDWGKVWEVFIPKKRDKLGNRFGFVRFQNVKEPSLLAEKLDRAYIGGKKLFVNIP 82
+W+ F +G+VWEVFI KK DK G RF F++F+ V + L E L + G KL VN+
Sbjct: 69 LWKLFLKFGRVWEVFIAKKLDKWGRRFAFIKFREVADVVELEESLKEVWWGNLKLKVNLS 128
Query: 83 RFSKQPVMKPRKGFE--PTAEGPRAEPKGVVMG---RNQQGEKDPLPFKEVLLKGLKSTS 137
RF ++ KG + P ++ K +V G RN K P V + L+
Sbjct: 129 RFDRED-----KGGQIIPASKKAVGVGKPMVAGISYRNVLEGKSP-----VEVPALEFLP 178
Query: 138 ERKIVEETQGKIPLLSDRCWQXXXXXXXXXXXXWLENSWVGKLKDLESLNTIQDNFFLEG 197
+ ++EE L N+ VG+L + +Q F+EG
Sbjct: 179 DDVMLEE---------------------------LWNAMVGRLLFHLEADALQTCLFMEG 211
Query: 198 DKAVKVRYLGDYLVLLTDDDDEALKEVLKDKEGWIGDMFEELNPWSPHIYSDFRISRVRC 257
+KV LG+ LVLL +D + + E K+ W F E+ PWSP+I + R + V+
Sbjct: 212 WSDIKVVPLGEKLVLLKEDRNGVIAEARAAKKNWWCATFIEVVPWSPNIVATSRRTWVQI 271
Query: 258 TGIPLHFWNMECFNLLVSEFGTLVGLDEATSSFKRLEFARLKVRTTSENPISWFKKLNLN 317
GIPLH W + F + S FGT + DE T++ R++ A L + T I K+ +
Sbjct: 272 RGIPLHIWKEDFFKKVRSFFGTFIDFDEETTTRNRMDVANLLISTKRMGRIDEEMKVKVM 331
Query: 318 GKEYGV 323
G + +
Sbjct: 332 GAVFSI 337
>Medtr7g108440.1 | endonuclease/exonuclease/phosphatase family
protein | LC | chr7:44159092-44161950 | 20130731
Length = 801
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 114/253 (45%), Gaps = 29/253 (11%)
Query: 23 MWRFFEDWGKVWEVFIPKKRDKLGNRFGFVRFQNVKEPSLLAEKLDRAYIGGKKLFVNIP 82
+W+ F +G V +VF+ KK DK G +FGFV+++ V LA +L+ + +L VN+
Sbjct: 37 LWKLFAKFGYVGKVFLAKKLDKWGRKFGFVKYKEVIYMEDLATRLEHVWFDNVRLKVNLA 96
Query: 83 RFSKQ--PVMKPRKGFEPTAEGPRAEPKGVVMGRNQQGEKDPLPFKEVLLKGLKSTSERK 140
RF ++ ++ + G E + G GV FK + K + ++
Sbjct: 97 RFGREERSLVAVQYGEERSGGGAALVIPGV-------------SFKAAMTK-VSGAAQTG 142
Query: 141 IVEETQGKIPLLSDRCWQXXXXXXXXXXXXWLENSWVGKLKDLESLNTIQDNFFLEGDKA 200
VE ++ D LE +VG+L+ +E +Q F +EG
Sbjct: 143 GVESACLQVNPSED-------------MLRLLEAGYVGELRCIEDFIQVQQRFVMEGTGG 189
Query: 201 VKVRYLGDYLVLLTDDDDEALKEVLKDKEGWIGDMFEELNPWSPHIYSDFRISRVRCTGI 260
VK+ +GD LVLL + A+ K E W MF+ + WSP + R ++ GI
Sbjct: 190 VKIMGMGDSLVLLLESVSGAVGRAAKSHEMWWWGMFKSVKKWSPQCVAVKRRIWLKVFGI 249
Query: 261 PLHFWNMECFNLL 273
PLH W+ E F +
Sbjct: 250 PLHVWDEELFKTI 262
>Medtr4g061950.1 | RNA recognition motif, a.k.a. RRM, RBD protein |
LC | chr4:22968278-22969165 | 20130731
Length = 295
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/255 (30%), Positives = 116/255 (45%), Gaps = 46/255 (18%)
Query: 23 MWRFFEDWGKVWEVFIPKKRDKLGNRFGFVRFQNVKEPSLLAEKLDRAYIGGKKLFVNIP 82
+++FF + +VWEVFIPKK D+ G RF F++F+ V + L E L + G KL VN+
Sbjct: 69 LYKFFLKFERVWEVFIPKKLDRWGRRFAFIKFREVVDVLELEESLKEVWWGNLKLKVNLS 128
Query: 83 RFSKQPVMKPRKGFEPTAEGPRAEPKGVVMGRNQQGEKDPLPFKEVLLKGLKSTSERKIV 142
RF + E KG G N K + ++ G TS +V
Sbjct: 129 RFDR-------------------EVKG---GHNIPATKKVAVVGKHVVAG---TSYLNVV 163
Query: 143 EETQGKIPL-------LSDRCWQXXXXXXXXXXXXWLENSWVGKLKDLESLNTIQDNFFL 195
E G+ P+ L D L+NS V +L ++ +Q F+
Sbjct: 164 E---GRSPMEAPFLEFLPDEVLLKE-----------LQNSMVDRLMYHLEVDALQTCLFM 209
Query: 196 EGDKAVKVRYLGDYLVLLTDDDDEALKEVLKDKEGWIGDMFEELNPWSPHIYSDFRISRV 255
EG +KV LG+ LV+L +D + + + K+ W F E PWSP+I + R + V
Sbjct: 210 EGWSGIKVVPLGEKLVMLKEDRQGVIAKAREAKKAWWSATFTEAVPWSPNIVATSRRTWV 269
Query: 256 RCTGIPLHFWNMECF 270
+ GIPLH W + F
Sbjct: 270 QLRGIPLHIWKEDFF 284
>Medtr1g033680.1 | DUF4283 domain protein | LC |
chr1:12165843-12167828 | 20130731
Length = 576
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 129/271 (47%), Gaps = 28/271 (10%)
Query: 35 EVFIPKKRDKLGNRFGFVRFQNVKEPSLLAEKLDRAYIGGKKLFVNIPRFSKQPVMKPRK 94
EV++P K D+ G+RFGFV+++++ + L +L ++ KL VN +F R+
Sbjct: 4 EVYVPLKTDRRGHRFGFVKYRDMVDVEALESRLGEIWMDDSKLQVNRAKFG-------RE 56
Query: 95 GFEPTAEGPRAEPKGVVMGRNQQGEKDPLPFKEVLLKGLKSTSERKIVEETQGKIPLLS- 153
PT+ R K V GR + KD FK+VLL K ++ + L S
Sbjct: 57 VKRPTSISVR---KDAVGGRGLEVFKD-RSFKQVLLNRQKDVVGPAVLRRL---VALPSE 109
Query: 154 DRCWQXXXXXXXXXXXXWLENSWVGKLKDLESLNTIQDNFFLEGDKAVKVRYLGDYLVLL 213
DR + LE+ +V +L L +Q + L G + V +G +VLL
Sbjct: 110 DRLRE-------------LESCFVAELSFLREPKQVQHSLVLGGLNKIGVIPMGANMVLL 156
Query: 214 TDDDDEALKEVLKDKEGWIGDMFEELNPWSPHIYSDFRISRVRCTGIPLHFWNMECFNLL 273
+D ++E + W +F+ + W+P++ S R+ +RC G+PLH W+ + F +
Sbjct: 157 KAEDPHLIEEAEGRSDPWWRGLFKSVKRWAPNLVSKQRLIWIRCFGLPLHVWDEKTFKKM 216
Query: 274 VSEFGTLVGLDEATSSFKRLEFARLKVRTTS 304
+ FG V DE T R++ R+ V ++S
Sbjct: 217 GALFGEFVDFDEETIGLNRVDMGRIYVLSSS 247
>Medtr8g470180.1 | hypothetical protein | LC |
chr8:25648349-25652187 | 20130731
Length = 538
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 102/217 (47%), Gaps = 25/217 (11%)
Query: 32 KVWEVFIPKKRDKLGNRFGFVRFQNVKEPSLLAEKLDRAYIGGKKLFVNIPRFSKQPVMK 91
KV EVFIPKK DK GNRFGFV+F+NVK+ L +L+ ++G +L VN RF
Sbjct: 345 KVGEVFIPKKLDKWGNRFGFVKFKNVKDEGDLEGRLEEVWLGESRLKVNKARFR------ 398
Query: 92 PRKGFEPTAEGPRAEPKGVVMGRNQQGEKDPLPFKEVLLKGLKSTSERKIVEETQGKIPL 151
R EP G V + + P VL+ G S + +V Q +
Sbjct: 399 ------------RDEPIGEVAVKRKVA---PAGGGRVLVDG---RSFKNVVAGEQSNGYV 440
Query: 152 LSDRCWQXXXXXXXXXXXXWLENSWVGKLKDLESLNTIQDNFFLEGDKAVKVRYLGDYLV 211
+ D+ WL++++VG+L+ + +Q +EG VKV +G +V
Sbjct: 441 MQDQM-TCLDFRPNEGMLDWLKDAYVGELRQALEASMVQQGLVMEGLHFVKVTCMGARMV 499
Query: 212 LLTDDDDEALKEVLKDKEGWIGDMFEELNPWSPHIYS 248
LL + L+EV + W G MF+ + W P++ +
Sbjct: 500 LLKFEGSMDLEEVKNKHQHWWGAMFKHVRRWLPNMVA 536
>Medtr2g103400.1 | DUF4283 domain protein | LC |
chr2:44519115-44517076 | 20130731
Length = 526
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 67/132 (50%)
Query: 200 AVKVRYLGDYLVLLTDDDDEALKEVLKDKEGWIGDMFEELNPWSPHIYSDFRISRVRCTG 259
++KV +G +VLL ++ V ++ W +F+E+ W+P++ + R +R G
Sbjct: 138 SIKVSSMGGKMVLLQSSVAGEIERVQREHHQWWCSIFKEVRCWTPNLVAKNRKVWLRFYG 197
Query: 260 IPLHFWNMECFNLLVSEFGTLVGLDEATSSFKRLEFARLKVRTTSENPISWFKKLNLNGK 319
IPLH W F L S FG + DEAT +RL+ AR+ V T I K+N+ G
Sbjct: 198 IPLHVWEESTFKKLGSIFGEFLDFDEATIERRRLDLARILVSTNRMGFIQDVVKINVMGA 257
Query: 320 EYGVRFQEEQQV 331
+GV EE V
Sbjct: 258 VFGVSVVEEGDV 269
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 37/64 (57%)
Query: 23 MWRFFEDWGKVWEVFIPKKRDKLGNRFGFVRFQNVKEPSLLAEKLDRAYIGGKKLFVNIP 82
+W+ F +G V EVF+PKKRDK RF V+F+ V + L L+ + G KL VN
Sbjct: 6 LWKLFGTFGWVGEVFLPKKRDKWNRRFEIVKFKEVADVGSLEASLEEVWWGDVKLKVNKA 65
Query: 83 RFSK 86
RF +
Sbjct: 66 RFGR 69
>Medtr1148s0010.1 | DUF4283 domain protein | LC |
scaffold1148:292-2316 | 20130731
Length = 604
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/306 (22%), Positives = 128/306 (41%), Gaps = 40/306 (13%)
Query: 27 FEDWGKVWEVFIPKKRDKLGNRFGFVRFQNVKEPSLLAEKLDRAYIGGKKLFVNIPRFSK 86
FE G + EV + +R+ +GFVRF V++ L ++ Y G + +I RF +
Sbjct: 33 FEVCGILEEVVVQSRRNVNEEIYGFVRFSKVRDVGKLLNVVNAIYFGNFHVRASIARFDR 92
Query: 87 QPVMKPRKGFEPTAEGPRAEPKGVVMGRNQQGEKDPLPFKEVLLKG-LKSTSERKIVEET 145
V++ +G E + + +G V G K+V+ G ++S
Sbjct: 93 SVVVRGNRGKEDE-DVVNSAIRGYVTGT-----------KQVVTGGNVESLG-------A 133
Query: 146 QGKIPLLSDRCWQXXXXXXXXXXXXWLENSWVGKLKDL---ESLNTIQDNFFLEGDKAVK 202
QG + D W +W G L ++ E++ +Q+ G +
Sbjct: 134 QGVGSNVDDLQW-----------------AWSGALANVVNGEAITVVQNRVEDAGFADLD 176
Query: 203 VRYLGDYLVLLTDDDDEALKEVLKDKEGWIGDMFEELNPWSPHIYSDFRISRVRCTGIPL 262
+ L V L D+ +L + + + F+ + W + R + +R GIPL
Sbjct: 177 IIPLVADRVFLRSKSDKETFTMLGEAKYFFDHFFKNIVRWEKAVVPSRRGAWLRLYGIPL 236
Query: 263 HFWNMECFNLLVSEFGTLVGLDEATSSFKRLEFARLKVRTTSENPISWFKKLNLNGKEYG 322
H WN F L V E G+ + D+ + R ++A + + T S N +S + L+++G+
Sbjct: 237 HAWNENLFKLCVMECGSFLHTDDMSLDKGRFDYASVLISTPSLNIVSRVEGLSIDGQMVD 296
Query: 323 VRFQEE 328
++ EE
Sbjct: 297 IKIIEE 302
>Medtr5g053650.1 | DUF4283 domain protein | LC |
chr5:22104331-22105538 | 20130731
Length = 385
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 90/183 (49%), Gaps = 6/183 (3%)
Query: 171 WLENSWVGKLKDLESLNTIQDNFFLEGDKAVKVRYLGDYLVLLTDDDDEALKEVLKDKEG 230
W S + +LK+ L +Q F G K+ LG+ V+L + E+ K
Sbjct: 9 WASKSILARLKNDFCLYIVQQAFVDVGFVDFKLISLGEDNVVLHPGVEGDAMELFKAAAD 68
Query: 231 WIGDMFEELNPWSPHIYSDF-RISRVRCTGIPLHFWNMECFNLLVSEFGTLVGLDEATSS 289
+IG+ ++ PW ++ R + VRC G+PLH WN F L + G L+ +D+ T++
Sbjct: 69 FIGNFLDDCRPWMLDSIVNYERGAWVRCYGVPLHVWNDIFFLELAATQGRLLKIDDCTTN 128
Query: 290 FKRLEFARLKVRTTSENPISWFKKLNLNGKEYGVRFQEEQQVIF-----DGFCSCHNHNQ 344
RL++A L + T S I+ +K+ ++G+ + +R E+ + F + CS Q
Sbjct: 129 KDRLDYACLLISTPSLKEINVIEKVWIDGRMFPIRIIEDFEFGFAEDDNNSQCSVSEGFQ 188
Query: 345 EEN 347
EE+
Sbjct: 189 EED 191
>Medtr1g024800.1 | DUF4283 domain protein | LC |
chr1:7950150-7950866 | 20130731
Length = 218
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 66/134 (49%)
Query: 195 LEGDKAVKVRYLGDYLVLLTDDDDEALKEVLKDKEGWIGDMFEELNPWSPHIYSDFRISR 254
+EG VKV + D LVLL + + A+ V K E W +F + WSP + R
Sbjct: 1 MEGIVRVKVTGMRDSLVLLLESEAGAVARVAKAHEMWWRGIFLSVKKWSPQCVAGKRRLW 60
Query: 255 VRCTGIPLHFWNMECFNLLVSEFGTLVGLDEATSSFKRLEFARLKVRTTSENPISWFKKL 314
++ GIPLH W+ E F + + F + DE +RL+FAR+ VRT+ I ++
Sbjct: 61 LKVFGIPLHVWDEELFKAIGNFFSEFLDFDEDIIGRRRLDFARINVRTSRRGLIDEEIRI 120
Query: 315 NLNGKEYGVRFQEE 328
+ G + + EE
Sbjct: 121 RVMGAVHKLWVVEE 134
>Medtr5g073130.1 | DUF4283 domain protein | LC |
chr5:31119102-31120734 | 20130731
Length = 401
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 65/280 (23%), Positives = 112/280 (40%), Gaps = 58/280 (20%)
Query: 35 EVFIPKKRDKLGNRFGFVRFQNVKEPSLLAEKLDRAYIGGKKLFVNIPRFSKQPVMKPRK 94
+V++ +KR+ G FGFVR+ VK+ L + ++ + +K+ + F K K +K
Sbjct: 80 DVYLVRKRNVNGGVFGFVRYCKVKDAEKLLKAVNNVWFSDRKVVAKVASFDKNG--KSQK 137
Query: 95 GFEPTAEGPRAEPKGVVMGRNQQGEKDPLPFKEVLLKGLKSTSERKIVEETQGKIPLLSD 154
+ EG + + +G + E + + E +L + IPLL
Sbjct: 138 EGKNMVEGEKRKHEGEIFN-----EAEKISLVETVL--------------NRDSIPLLQR 178
Query: 155 RCWQXXXXXXXXXXXXWLENSWVGKLKDLESLNTIQDNFFLEGDKAVKVRYLGDYLVLLT 214
R F G +++ LGD V L
Sbjct: 179 R-------------------------------------IFDAGFNTLEIIPLGDDKVFLR 201
Query: 215 DDDDEALKEVLKDKEGWIGDMFEELNPWSPHIYSDFRISRVRCTGIPLHFWNMECFNLLV 274
DD + +L + + F W+ I + R + VR G PL+ WN++ F L V
Sbjct: 202 TTDDGEVSFLLSQVAKFFNNFFTSPVRWNKGIVNRERGAWVRIYGTPLYAWNIKFFKLCV 261
Query: 275 SEFGTLVGLDEATSSFKRLEFARLKVRTTSENPISWFKKL 314
+ G L+ DE T +RL++AR+ V T++ I+ K+
Sbjct: 262 LDSGRLLQADEFTFEKQRLDYARVLVATSTLEVINSMSKI 301
>Medtr2g060030.1 | RNA recognition motif, a.k.a. RRM, RBD protein |
LC | chr2:24731568-24734132 | 20130731
Length = 768
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 68/296 (22%), Positives = 119/296 (40%), Gaps = 47/296 (15%)
Query: 27 FEDWGKVWEVFIPKKRDKLGNRFGFVRFQNVKEPSLLAEKLDRAYIGGKKLFVNIPRFSK 86
FE G + +V++ +K + G FGFVR+ VK+ L + L+ + G K+ + +K
Sbjct: 200 FEVCGIMEDVYLARKHNVNGGAFGFVRYGKVKDVEKLLKALNNVWFGDWKVVAKVGEGAK 259
Query: 87 QPVM-------KPRKGFEPTAEGPRAEPKGVVMGRNQ------------QGEKDPLPFKE 127
K + E AEG GV GR + G + E
Sbjct: 260 ASEGVRIFEGEKSKAEREKVAEGV----SGVGGGRKEFDGVVGKRGGVVAGGGGEVEGGE 315
Query: 128 VLLKGLKSTSERKIVEETQGKIPLLSDRCWQXXXXXXXXXXXXWLENSWVGKLKDLESLN 187
+ ST +VEE Q + RC + + D E++
Sbjct: 316 RRMNVEGSTGATVVVEEKQ-----QASRCM-------------------IATVLDGEAIP 351
Query: 188 TIQDNFFLEGDKAVKVRYLGDYLVLLTDDDDEALKEVLKDKEGWIGDMFEELNPWSPHIY 247
+Q + G + + + +G VLL +D+ + +L + + F + W +
Sbjct: 352 VLQRRIYDAGFENLDIIPMGADKVLLKTEDESDVNVILSEAASFFASFFTNIVKWKKEVV 411
Query: 248 SDFRISRVRCTGIPLHFWNMECFNLLVSEFGTLVGLDEATSSFKRLEFARLKVRTT 303
+ + VR G+PL WN+E F L V + G L+ +D+ T R ++AR+ + T+
Sbjct: 412 FREKGAWVRIYGVPLQAWNLEFFKLCVYDCGRLLKVDDYTVDKLRFDYARVLISTS 467
>Medtr4g005250.1 | DUF4283 domain protein | LC | chr4:141735-140284
| 20130731
Length = 360
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 53/105 (50%)
Query: 224 VLKDKEGWIGDMFEELNPWSPHIYSDFRISRVRCTGIPLHFWNMECFNLLVSEFGTLVGL 283
V D + G +F E++ W R + +R G P H WN F + VS+ G +
Sbjct: 256 VFNDALDFFGMLFSEVHKWESKDEQYERGAWIRIYGTPAHAWNESFFKICVSKCGRFIRS 315
Query: 284 DEATSSFKRLEFARLKVRTTSENPISWFKKLNLNGKEYGVRFQEE 328
D+ T RL FAR+ + TTS I+ ++ ++G+ Y ++F EE
Sbjct: 316 DKCTIDRARLHFARVLISTTSIEVINSITEVVVDGRLYLLKFVEE 360
>Medtr6g053340.1 | DUF4283 domain protein | LC |
chr6:19165882-19167320 | 20130731
Length = 274
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 66/150 (44%), Gaps = 9/150 (6%)
Query: 191 DNFFLEGDKAVKVRYLGDYLVLLTDDDDEALKEVLKDKEGWIGDMFEELNPWSPHIYSDF 250
+NF L G + + G ++D + V D + G +++ W+
Sbjct: 120 ENFVLTGSEGNLINK-GVIEYQFAEEDRDWAGSVFNDAADFFGLFLTDVHKWTSKEVWYE 178
Query: 251 RISRVRCTGIPLHFWNMECFNLLVSEFGTLVGLDEATSSFKRLEFARLKVRTTSENPISW 310
R + VR G P+H WN+ F L VS+ G V DE T R++FAR+ + T S ++
Sbjct: 179 RGAWVRIYGTPVHAWNINFFKLCVSKCGRFVREDECTLERGRIDFARILISTYSLEVLNK 238
Query: 311 FKKLNLNGKEYGVRFQEEQQVIFDGFCSCH 340
L ++G Y ++ EE C C+
Sbjct: 239 MMVLMVDGCNYNIKLVEE--------CGCN 260
>Medtr3g048390.1 | DUF4283 domain protein | LC |
chr3:17919204-17917831 | 20130731
Length = 457
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 66/134 (49%), Gaps = 9/134 (6%)
Query: 207 GDYLVLLTDDDDEALKEVLKDKEGWIGDMFEELNPWSPHIYSDFRISR---VRCTGIPLH 263
GD ++L ++ + L + + F ++ WS + D R +R G+PLH
Sbjct: 221 GDNVILFCSGKEDMMSVYLAAAD-FFNCFFTDMRAWS--LTEDNVPERGVWLRIYGVPLH 277
Query: 264 FWNMECFNLLVSEFGTLVGLDEATSSFKRLEFARLKVRTTSENPISWFKKLNLNGKEYGV 323
W+++ + S G ++ +D T++ +RL+FAR+ V T + I+ + + ++ K Y +
Sbjct: 278 VWHIKFLEFISSSCGRMLKIDPCTTNLERLDFARILVSTECLDTINAVENILIDDKHYSI 337
Query: 324 RFQEEQQVIFDGFC 337
+ EE I GF
Sbjct: 338 KIVEE---IAAGFA 348
>Medtr0073s0040.1 | DUF4283 domain protein | LC |
scaffold0073:22485-21368 | 20130731
Length = 344
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 71/158 (44%)
Query: 171 WLENSWVGKLKDLESLNTIQDNFFLEGDKAVKVRYLGDYLVLLTDDDDEALKEVLKDKEG 230
W + + + E++ +Q + G + + + LG VLL DDD + +L +
Sbjct: 64 WASRGMIATVHNGEAIPVLQRRIYDAGFEHLDIITLGADKVLLRTDDDSDVLFLLSEASD 123
Query: 231 WIGDMFEELNPWSPHIYSDFRISRVRCTGIPLHFWNMECFNLLVSEFGTLVGLDEATSSF 290
+ F + W + R + VR G+PL N E F L V + G ++ +D+ T
Sbjct: 124 FFDTFFTKPVKWKKDMVVRERGAWVRIFGVPLQACNPEFFKLCVYDCGRMLKVDDPTLEK 183
Query: 291 KRLEFARLKVRTTSENPISWFKKLNLNGKEYGVRFQEE 328
++AR+ V T+S + I + + G + ++ EE
Sbjct: 184 IHFDYARVLVSTSSLDLIISAANVMVYGVIFDLKIVEE 221
>Medtr8g058470.1 | DUF4283 domain protein | LC |
chr8:20135093-20137121 | 20130731
Length = 567
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 57/110 (51%)
Query: 219 EALKEVLKDKEGWIGDMFEELNPWSPHIYSDFRISRVRCTGIPLHFWNMECFNLLVSEFG 278
E + +V D + G +F+ ++ WS R + +R G+P+H WN + F + V+ G
Sbjct: 46 EDIWQVFNDAVHFFGMLFDNIHKWSEQDTRYERGAWLRVYGVPIHAWNDDFFRMCVNRVG 105
Query: 279 TLVGLDEATSSFKRLEFARLKVRTTSENPISWFKKLNLNGKEYGVRFQEE 328
+ LDE T+ RL++AR+ + ++ + ++ +++ ++ EE
Sbjct: 106 RFIHLDECTADRARLDYARILILMPQIEIVNSTPEFLIDDRKHFIKLVEE 155
>Medtr7g108760.1 | DUF4283 domain protein | LC |
chr7:44356978-44354950 | 20130731
Length = 569
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 57/110 (51%)
Query: 219 EALKEVLKDKEGWIGDMFEELNPWSPHIYSDFRISRVRCTGIPLHFWNMECFNLLVSEFG 278
E + +V D + G +F+ ++ WS R + +R G+P+H WN + F + V+ G
Sbjct: 46 EDIWQVFNDAVHFFGMLFDNIHKWSEQDTRYERGAWLRVYGVPIHAWNDDFFRMCVNRVG 105
Query: 279 TLVGLDEATSSFKRLEFARLKVRTTSENPISWFKKLNLNGKEYGVRFQEE 328
+ LDE T+ RL++AR+ + ++ + ++ +++ ++ EE
Sbjct: 106 RFIHLDECTADRARLDYARILILMPQIEIVNSTPEFLIDDRKHFIKLVEE 155
>Medtr7g104745.1 | hypothetical protein | LC |
chr7:42466146-42462238 | 20130731
Length = 787
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 81/191 (42%), Gaps = 23/191 (12%)
Query: 63 LAEKLDRAYIGGKKLFVNIPRFSKQPVMKPRKGFEPTAEG--PRAEPKGVVMGRNQQGEK 120
L +L + G KKL VNI RF + V + +G + P E + V G
Sbjct: 52 LEAELQDVWWGDKKLKVNIARFGRVEVSEEGRGRKEQQGNARPYVEKRKVEEG------- 104
Query: 121 DPLPFKEVLLKGLKSTSERKIVEETQGKIPLLSDRCWQXXXXXXXXXXXXWLENSWVGKL 180
L FKE L + + + E + + LLS L+ ++VG L
Sbjct: 105 --LSFKEALQRNYNVIQD-SVKEGVKPVLELLSSE-----------EVLEDLKRTFVGVL 150
Query: 181 KDLESLNTIQDNFFLEGDKAVKVRYLGDYLVLLTDDDDEALKEVLKDKEGWIGDMFEELN 240
K + ++Q F+EG + + V +GD LL + + + +K+K+ W F +
Sbjct: 151 KLFMDVKSLQTRLFMEGWRGISVASIGDKRFLLRGEAPGIVLDAMKEKKLWWDSTFANIR 210
Query: 241 PWSPHIYSDFR 251
PW+P + SD R
Sbjct: 211 PWAPQLVSDSR 221
>Medtr7g083690.1 | endonuclease/exonuclease/phosphatase family
protein | LC | chr7:32221247-32217435 | 20130731
Length = 1124
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 72/159 (45%), Gaps = 1/159 (0%)
Query: 171 WLENSWVGKLKDLESLNTIQDNFFLEGDKAVKVRYLGDYLVLLTDDDDEALKEVLKDKEG 230
W V + +S ++Q G V V +G V L E + V D
Sbjct: 181 WASEGMVASVVSGDSSLSLQQRVEDAGFSNVVVTPMGSDRVFLYCTGGEDIWTVFNDVVH 240
Query: 231 WIGDMFEELNPWSPHIYSDFRISRVRCTGIPLHFWNMECFNLLVSEFGTLVGLDEATSSF 290
+ G +F +L+ WS R + GIP+H WN + + + VS G + D+ T+
Sbjct: 241 FFGMLFSDLHRWSSEDIIYERGDWIIIYGIPVHAWNEDFYKICVSGSGRFIRSDDCTAVD 300
Query: 291 K-RLEFARLKVRTTSENPISWFKKLNLNGKEYGVRFQEE 328
+ RL+FAR+ + TT +++ ++ ++G Y ++ EE
Sbjct: 301 RARLDFARVLISTTFLEVVNYTFEVVIDGCNYLLKLVEE 339
>Medtr5g055560.1 | RNA recognition motif, a.k.a. RRM, RBD protein |
LC | chr5:22877462-22879545 | 20130731
Length = 511
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 32/51 (62%)
Query: 252 ISRVRCTGIPLHFWNMECFNLLVSEFGTLVGLDEATSSFKRLEFARLKVRT 302
+S ++ GIPLH W+ F ++ + FG V DE T S RL+FAR+KV T
Sbjct: 233 LSEIKIHGIPLHVWDEPLFKVVGNMFGAFVDFDEDTVSRNRLDFARIKVST 283
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 43/89 (48%), Gaps = 23/89 (25%)
Query: 23 MWRFFEDWGKVWEVFIPKKRDKLGNRFGFVRFQNVKEPSLLAEKLDRAYIGGKKLFVNIP 82
+W F +G+V EVFIP K DK G RFGFV+F++V G +KL VN
Sbjct: 93 IWSVFAKYGQVVEVFIPNKLDKWGKRFGFVKFKDV---------------GNRKLKVNRA 137
Query: 83 RFSKQP--------VMKPRKGFEPTAEGP 103
RF ++ V + R+ EGP
Sbjct: 138 RFGRETQQLVVQGVVEERRRTVVAAGEGP 166
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 32/50 (64%)
Query: 23 MWRFFEDWGKVWEVFIPKKRDKLGNRFGFVRFQNVKEPSLLAEKLDRAYI 72
+W F +G+V EVFIP K DK G RFGFV+F++V +L +L+ I
Sbjct: 35 IWSVFAKYGQVVEVFIPNKLDKWGKRFGFVKFKDVGNEEVLRVRLEEMRI 84
>Medtr7g073570.1 | DUF4283 domain protein | LC |
chr7:27505208-27506542 | 20130731
Length = 375
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 36/61 (59%)
Query: 239 LNPWSPHIYSDFRISRVRCTGIPLHFWNMECFNLLVSEFGTLVGLDEATSSFKRLEFARL 298
+ WSP++ + RI ++ GIPLH W + F L +++ + DE T S KR++ AR+
Sbjct: 1 MKVWSPNLVAKGRIVWIKILGIPLHVWEEKTFKQLGNQYEEFLDFDEVTISRKRMDVARI 60
Query: 299 K 299
K
Sbjct: 61 K 61
>Medtr6g024400.1 | DUF4283 domain protein | LC |
chr6:8739492-8737037 | 20130731
Length = 680
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 47/93 (50%)
Query: 236 FEELNPWSPHIYSDFRISRVRCTGIPLHFWNMECFNLLVSEFGTLVGLDEATSSFKRLEF 295
F +L PW + S R + +R GIPLH WN F L V ++G + +D + R ++
Sbjct: 313 FTDLVPWVKKVMSFQRGAWLRLYGIPLHTWNENFFKLCVLDYGRYLRVDSGSVDRDRFDY 372
Query: 296 ARLKVRTTSENPISWFKKLNLNGKEYGVRFQEE 328
AR+ V +S I + + ++G V+ EE
Sbjct: 373 ARVLVAFSSFEIIQKKESILIDGVTVEVKILEE 405
>Medtr8g045280.1 | DUF4283 domain protein | LC |
chr8:17686445-17683874 | 20130731
Length = 804
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 58/134 (43%)
Query: 171 WLENSWVGKLKDLESLNTIQDNFFLEGDKAVKVRYLGDYLVLLTDDDDEALKEVLKDKEG 230
W + ++ + + E++ +Q G K + V LG V + D + ++
Sbjct: 376 WARSGFLASVLNGEAIPVVQTRIEDAGFKDLDVIPLGADRVFMRSASDVEVSTIIAGARD 435
Query: 231 WIGDMFEELNPWSPHIYSDFRISRVRCTGIPLHFWNMECFNLLVSEFGTLVGLDEATSSF 290
+ +F + W R + +R GIPLH WN F L V E G + D +
Sbjct: 436 FFDHIFLNIVRWEKQSVPFQRGAWLRLYGIPLHAWNENFFKLCVFECGRFLRSDGCSMEK 495
Query: 291 KRLEFARLKVRTTS 304
+R ++AR+ + T+S
Sbjct: 496 ERFDYARILIATSS 509