Miyakogusa Predicted Gene

Lj5g3v1516760.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1516760.1 Non Characterized Hit- tr|I3T486|I3T486_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,39.52,0.000000000000001,seg,NULL,CUFF.55391.1
         (195 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g084000.2 | hypothetical protein | HC | chr1:37437982-3744...   304   4e-83
Medtr1g084000.1 | hypothetical protein | HC | chr1:37437982-3744...   304   4e-83
Medtr1g084000.3 | hypothetical protein | HC | chr1:37437982-3744...   304   4e-83
Medtr4g102360.1 | hypothetical protein | HC | chr4:42418810-4241...    87   1e-17

>Medtr1g084000.2 | hypothetical protein | HC |
           chr1:37437982-37442930 | 20130731
          Length = 202

 Score =  304 bits (778), Expect = 4e-83,   Method: Compositional matrix adjust.
 Identities = 165/204 (80%), Positives = 168/204 (82%), Gaps = 11/204 (5%)

Query: 1   MDSSPVITPEDVLESLMNDGTIDALRLKIINQLKANEELKSTTIKMAEQSKVLNTPGAEK 60
           M SS VITPEDVLESLMNDGTIDALRLKIINQLKANEELKSTTIKMAEQSKVLNTPGAEK
Sbjct: 1   MASSSVITPEDVLESLMNDGTIDALRLKIINQLKANEELKSTTIKMAEQSKVLNTPGAEK 60

Query: 61  QTKRELFDALRRELEASVLEKASKSVWDLILDNNGLGKEISETVERVFCRLSGQEPPLFP 120
           QTKRELFDALR+ELEASVLEKASKSVWDLILDNNGLGKEISETVERVFCRLSGQEPPLFP
Sbjct: 61  QTKRELFDALRQELEASVLEKASKSVWDLILDNNGLGKEISETVERVFCRLSGQEPPLFP 120

Query: 121 LQNGEPQPDKEVDSXXXXXXXXXXXXXXXXXXTITPLKKRSYSEINLE-ADETATRSSDP 179
           L NGEPQPDKE DS                   ITP KKRS+SE NL+ ADETATRSSDP
Sbjct: 121 LLNGEPQPDKEADSRKEKGKGKLKENENTSL--ITPSKKRSFSETNLDGADETATRSSDP 178

Query: 180 TTL--------EGSGKSPLSISKT 195
            T         EGSGKSPLSISKT
Sbjct: 179 ATRSSDPAAISEGSGKSPLSISKT 202


>Medtr1g084000.1 | hypothetical protein | HC |
           chr1:37437982-37442930 | 20130731
          Length = 202

 Score =  304 bits (778), Expect = 4e-83,   Method: Compositional matrix adjust.
 Identities = 165/204 (80%), Positives = 168/204 (82%), Gaps = 11/204 (5%)

Query: 1   MDSSPVITPEDVLESLMNDGTIDALRLKIINQLKANEELKSTTIKMAEQSKVLNTPGAEK 60
           M SS VITPEDVLESLMNDGTIDALRLKIINQLKANEELKSTTIKMAEQSKVLNTPGAEK
Sbjct: 1   MASSSVITPEDVLESLMNDGTIDALRLKIINQLKANEELKSTTIKMAEQSKVLNTPGAEK 60

Query: 61  QTKRELFDALRRELEASVLEKASKSVWDLILDNNGLGKEISETVERVFCRLSGQEPPLFP 120
           QTKRELFDALR+ELEASVLEKASKSVWDLILDNNGLGKEISETVERVFCRLSGQEPPLFP
Sbjct: 61  QTKRELFDALRQELEASVLEKASKSVWDLILDNNGLGKEISETVERVFCRLSGQEPPLFP 120

Query: 121 LQNGEPQPDKEVDSXXXXXXXXXXXXXXXXXXTITPLKKRSYSEINLE-ADETATRSSDP 179
           L NGEPQPDKE DS                   ITP KKRS+SE NL+ ADETATRSSDP
Sbjct: 121 LLNGEPQPDKEADSRKEKGKGKLKENENTSL--ITPSKKRSFSETNLDGADETATRSSDP 178

Query: 180 TTL--------EGSGKSPLSISKT 195
            T         EGSGKSPLSISKT
Sbjct: 179 ATRSSDPAAISEGSGKSPLSISKT 202


>Medtr1g084000.3 | hypothetical protein | HC |
           chr1:37437982-37442930 | 20130731
          Length = 202

 Score =  304 bits (778), Expect = 4e-83,   Method: Compositional matrix adjust.
 Identities = 165/204 (80%), Positives = 168/204 (82%), Gaps = 11/204 (5%)

Query: 1   MDSSPVITPEDVLESLMNDGTIDALRLKIINQLKANEELKSTTIKMAEQSKVLNTPGAEK 60
           M SS VITPEDVLESLMNDGTIDALRLKIINQLKANEELKSTTIKMAEQSKVLNTPGAEK
Sbjct: 1   MASSSVITPEDVLESLMNDGTIDALRLKIINQLKANEELKSTTIKMAEQSKVLNTPGAEK 60

Query: 61  QTKRELFDALRRELEASVLEKASKSVWDLILDNNGLGKEISETVERVFCRLSGQEPPLFP 120
           QTKRELFDALR+ELEASVLEKASKSVWDLILDNNGLGKEISETVERVFCRLSGQEPPLFP
Sbjct: 61  QTKRELFDALRQELEASVLEKASKSVWDLILDNNGLGKEISETVERVFCRLSGQEPPLFP 120

Query: 121 LQNGEPQPDKEVDSXXXXXXXXXXXXXXXXXXTITPLKKRSYSEINLE-ADETATRSSDP 179
           L NGEPQPDKE DS                   ITP KKRS+SE NL+ ADETATRSSDP
Sbjct: 121 LLNGEPQPDKEADSRKEKGKGKLKENENTSL--ITPSKKRSFSETNLDGADETATRSSDP 178

Query: 180 TTL--------EGSGKSPLSISKT 195
            T         EGSGKSPLSISKT
Sbjct: 179 ATRSSDPAAISEGSGKSPLSISKT 202


>Medtr4g102360.1 | hypothetical protein | HC |
           chr4:42418810-42415193 | 20130731
          Length = 242

 Score = 86.7 bits (213), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 44/107 (41%), Positives = 67/107 (62%)

Query: 6   VITPEDVLESLMNDGTIDALRLKIINQLKANEELKSTTIKMAEQSKVLNTPGAEKQTKRE 65
           V+  E+V+  L +DG  D LRLKII +LK NEEL+   I + +QS+ LN  GAE    R+
Sbjct: 13  VVGKEEVITKLKDDGDFDRLRLKIIRKLKDNEELRQHIISIVKQSEALNRAGAENMKPRQ 72

Query: 66  LFDALRRELEASVLEKASKSVWDLILDNNGLGKEISETVERVFCRLS 112
           L D +  E+  +V+   S S+W +I  ++G+  EI ETV+ V+ +L+
Sbjct: 73  LSDVIYEEVGENVMSHISDSLWQIIRSSDGMKGEIVETVQSVYDKLA 119