Miyakogusa Predicted Gene

Lj5g3v1014750.2
Show Alignment: 

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1014750.2 Non Characterized Hit- tr|I1L878|I1L878_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,71.14,0,seg,NULL,CUFF.54629.2
         (896 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g069120.1 | hypothetical protein | HC | chr3:30942944-3093...  1056   0.0  
Medtr1g071240.1 | pentatricopeptide (PPR) repeat protein | HC | ...   142   1e-33

>Medtr3g069120.1 | hypothetical protein | HC |
           chr3:30942944-30939465 | 20130731
          Length = 884

 Score = 1056 bits (2730), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 552/900 (61%), Positives = 646/900 (71%), Gaps = 26/900 (2%)

Query: 1   MEFSEEWKTLFPIGASTVSPLLL-SDSNATGPLFFNPIXXXXXXXXXXXXXXXXXXXXXX 59
           MEFSEEWK+LFPIGASTVS LLL SD ++ GPLFFNP                       
Sbjct: 1   MEFSEEWKSLFPIGASTVSNLLLHSDPDSLGPLFFNP--NSNSPTPIFSSTIPSLHLPHN 58

Query: 60  XXXXRFLXXXXXXXXXXXXXXXXXXXXXXXN-ENCNASFFLRNRVHLLRYPDRPNAVVLF 118
               R+L                         ++ N S FL NR+ LL+ P+ P AVV+F
Sbjct: 59  LLTERYLLTSDPSILPSTASTIAHLFDSTPELDDDNVSHFLHNRIQLLKCPNTPKAVVIF 118

Query: 119 PTGANDENIGFFMVYAEDSEVQFQVDSEGHVFQTDTGPKHRILRISVTPVDDFGLGESGS 178
           PTGANDE IGFFM+  +DS ++ ++D +G VF+  TG   RILR+SV PV      E  S
Sbjct: 119 PTGANDETIGFFMLGVKDSLLETRLDVKGDVFRASTGSSSRILRMSVNPV-----TEDDS 173

Query: 179 TGKSSPVIGYVMTSTLYSVNWFVVKHNLVLERPSVFYLG-GRVFKNCPVHACWSPHIXXX 237
              SSPVIGYV+ S+ YSV WF VKHNL  + PS+ YLG  +VFK   V ACWSPHI   
Sbjct: 174 EPDSSPVIGYVLASSRYSVCWFDVKHNLSSDSPSMSYLGRSKVFKEAVVRACWSPHILEE 233

Query: 238 XXXXXXXXXXXXXDLESRGFGTDFKGTRLRVPWGDSVVSEKMVWLSCEFSWHPRILIVAR 297
                        D++++G    FKGTRLRVPW DS  SE   WLSCEFSWHPRILIVAR
Sbjct: 234 SMVLLESGQLFLFDVDAQGSMKTFKGTRLRVPWNDSACSENKAWLSCEFSWHPRILIVAR 293

Query: 298 SDAVFLVDLRLKECSVTCLVKIEMLRMYAPAEKEQFLALSRAG---PDNFYFAVASSSLL 354
            DAVFLVD R  EC+VTCL+KIE LRMYAP E E+FLALSR G   PDNFYF V S SLL
Sbjct: 294 YDAVFLVDFRSNECNVTCLLKIETLRMYAPDENERFLALSRVGTESPDNFYFTVTSRSLL 353

Query: 355 LLCDVRKPLMPVLQWLHGIDGPCYINVLSLSMLRSHSKEDTFKLASDSGFCIILGSFWNC 414
           +LCD+R PL PVLQW HGID PCY+ VLSLS LRSHSKEDTF+LAS+ GFCIILGSFWN 
Sbjct: 354 VLCDIRNPLKPVLQWRHGIDEPCYMTVLSLSTLRSHSKEDTFQLASEMGFCIILGSFWNS 413

Query: 415 EFNMFCYGSSLPFQKGSIASKLSKISTTFRAWELPFEINVSCRECHCGSCLLRDELSKDA 474
           EFN+FCYG +  F+KGSI S LSKI+TTF AWELP EIN+S R CHCG+CL R+ELSKDA
Sbjct: 414 EFNIFCYGPA-SFRKGSITSTLSKINTTFCAWELPSEINLSSRGCHCGNCLFREELSKDA 472

Query: 475 LPEWIDWQLKKEIVLGFGILSNDLASLLCEPDEHGGFTLIRLMSSGKFELQRYQASWAVA 534
           LPEWID QLKKE+VLGFGILSNDLASLLCEPDEHGGFTL+R+MSSGKFELQRY AS A+A
Sbjct: 473 LPEWIDLQLKKEMVLGFGILSNDLASLLCEPDEHGGFTLVRVMSSGKFELQRYHASQAMA 532

Query: 535 RNIEHCHEQGSCLDRQLLYPMNDEKYKFPKI-FHYLKLDYLYAYANGSLTQNLYTKLKKT 593
           R++E CHE   CL+  LL P++ ++YK+    F YLKL+YLYAYANG+L Q L TKL+KT
Sbjct: 533 RSLEDCHEADLCLESHLLCPLSVKEYKYKSSEFRYLKLNYLYAYANGNLGQILTTKLEKT 592

Query: 594 DMNARDKEPFCAEVHELLCEKLNACGFGQSRLCPAITNVFKDVKLPTSFHEVALRRLWAD 653
             + +++ PFC+EVHELLC+KLNACG G SR  PAI+++FKDV LP SFHEVALR+LW D
Sbjct: 593 YSDDQEEAPFCSEVHELLCKKLNACGLGHSRSSPAISSIFKDVTLPASFHEVALRKLWTD 652

Query: 654 LPLELLQLAFLSYSECRKVTGNSQNSLALEFLAVPALPQLPPFSLRKSSSHSNDDIVGPV 713
           LPLELLQLAFLSYSECR+V  ++QN + LEF AVP LPQLPPF LRK S HS++DIVGPV
Sbjct: 653 LPLELLQLAFLSYSECREVIAHNQNMVPLEFSAVPDLPQLPPFFLRKPSPHSDNDIVGPV 712

Query: 714 IPFPVLLVLHEFHNGYSDSERGQFSLEAEIDLKYNEVMQVAREISVSASSTHMDDHAVSL 773
           IPFPVLLV++E   GYS SE  +FS+EAE+DLKY EVMQVA EI   A S H DDH +SL
Sbjct: 713 IPFPVLLVINEVRYGYSSSESDEFSVEAELDLKYKEVMQVACEI---AGSCHPDDHEISL 769

Query: 774 ADDGEDTRVGSSKSKCVYCPVAFNFSAANIVPGNSVYRDSNYDTFIFHVSES---KPCEQ 830
            DD  +   GS K K         +   + V GNSV+ D+ YDTFIF VSE    +P E+
Sbjct: 770 GDDKTEHWDGSLKPKSFS-----TYRQIDNVQGNSVHTDTIYDTFIFKVSEKSCEEPGEK 824

Query: 831 TESVGQEIFDDLCPVELRFDAPVKKFESQDLKAYNLLKRQMSKWQENFDLYKEFCIQSNF 890
           TESVG+E+FDDLCP+ LRFDAPV KFE Q L+A+ LLK +MSKWQ +FDLY EFC QS F
Sbjct: 825 TESVGEEMFDDLCPITLRFDAPVTKFEQQSLEAFTLLKLKMSKWQNSFDLYNEFCSQSGF 884


>Medtr1g071240.1 | pentatricopeptide (PPR) repeat protein | HC |
            chr1:31582853-31578503 | 20130731
          Length = 1126

 Score =  142 bits (359), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 84/163 (51%), Positives = 104/163 (63%), Gaps = 4/163 (2%)

Query: 700  KSSSHSNDDIVGPVIPFPVLLVLHEFHNGYSDSERG--QFSLEAEIDLKYNEVMQVAREI 757
            K+S HSNDDIVGPVIPF VLLV+ E   G   S+ G  +FS +A++ LKY EVMQ+A EI
Sbjct: 959  KTSPHSNDDIVGPVIPFAVLLVVDEVRYGIKSSDLGSIEFSDDAKLGLKYKEVMQMAGEI 1018

Query: 758  SV-SASSTHMDDHAVSLADDGEDTRVGSSKSKCVYCPVAFNFSAANIVPGNSVYRDSNYD 816
             V S  S H DDHAVSL     +  +        +        +      NS+Y D+ YD
Sbjct: 1019 DVLSHRSMHPDDHAVSLLMTKRNPGLILQNQLFRHIVQRLESLSHRQCTWNSIYTDTIYD 1078

Query: 817  TFIFHVSESKPCEQTESVGQEIFDDLCPVELRFDAPVKKFESQ 859
            TFIFHV ++  CEQTE VG+E+FDDL P+ELRF+APVKKFE Q
Sbjct: 1079 TFIFHVLDN-SCEQTEPVGEEMFDDLWPIELRFNAPVKKFEHQ 1120