Miyakogusa Predicted Gene
- Lj5g3v1014750.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj5g3v1014750.2 Non Characterized Hit- tr|I1L878|I1L878_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,71.14,0,seg,NULL,CUFF.54629.2
(896 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr3g069120.1 | hypothetical protein | HC | chr3:30942944-3093... 1056 0.0
Medtr1g071240.1 | pentatricopeptide (PPR) repeat protein | HC | ... 142 1e-33
>Medtr3g069120.1 | hypothetical protein | HC |
chr3:30942944-30939465 | 20130731
Length = 884
Score = 1056 bits (2730), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 552/900 (61%), Positives = 646/900 (71%), Gaps = 26/900 (2%)
Query: 1 MEFSEEWKTLFPIGASTVSPLLL-SDSNATGPLFFNPIXXXXXXXXXXXXXXXXXXXXXX 59
MEFSEEWK+LFPIGASTVS LLL SD ++ GPLFFNP
Sbjct: 1 MEFSEEWKSLFPIGASTVSNLLLHSDPDSLGPLFFNP--NSNSPTPIFSSTIPSLHLPHN 58
Query: 60 XXXXRFLXXXXXXXXXXXXXXXXXXXXXXXN-ENCNASFFLRNRVHLLRYPDRPNAVVLF 118
R+L ++ N S FL NR+ LL+ P+ P AVV+F
Sbjct: 59 LLTERYLLTSDPSILPSTASTIAHLFDSTPELDDDNVSHFLHNRIQLLKCPNTPKAVVIF 118
Query: 119 PTGANDENIGFFMVYAEDSEVQFQVDSEGHVFQTDTGPKHRILRISVTPVDDFGLGESGS 178
PTGANDE IGFFM+ +DS ++ ++D +G VF+ TG RILR+SV PV E S
Sbjct: 119 PTGANDETIGFFMLGVKDSLLETRLDVKGDVFRASTGSSSRILRMSVNPV-----TEDDS 173
Query: 179 TGKSSPVIGYVMTSTLYSVNWFVVKHNLVLERPSVFYLG-GRVFKNCPVHACWSPHIXXX 237
SSPVIGYV+ S+ YSV WF VKHNL + PS+ YLG +VFK V ACWSPHI
Sbjct: 174 EPDSSPVIGYVLASSRYSVCWFDVKHNLSSDSPSMSYLGRSKVFKEAVVRACWSPHILEE 233
Query: 238 XXXXXXXXXXXXXDLESRGFGTDFKGTRLRVPWGDSVVSEKMVWLSCEFSWHPRILIVAR 297
D++++G FKGTRLRVPW DS SE WLSCEFSWHPRILIVAR
Sbjct: 234 SMVLLESGQLFLFDVDAQGSMKTFKGTRLRVPWNDSACSENKAWLSCEFSWHPRILIVAR 293
Query: 298 SDAVFLVDLRLKECSVTCLVKIEMLRMYAPAEKEQFLALSRAG---PDNFYFAVASSSLL 354
DAVFLVD R EC+VTCL+KIE LRMYAP E E+FLALSR G PDNFYF V S SLL
Sbjct: 294 YDAVFLVDFRSNECNVTCLLKIETLRMYAPDENERFLALSRVGTESPDNFYFTVTSRSLL 353
Query: 355 LLCDVRKPLMPVLQWLHGIDGPCYINVLSLSMLRSHSKEDTFKLASDSGFCIILGSFWNC 414
+LCD+R PL PVLQW HGID PCY+ VLSLS LRSHSKEDTF+LAS+ GFCIILGSFWN
Sbjct: 354 VLCDIRNPLKPVLQWRHGIDEPCYMTVLSLSTLRSHSKEDTFQLASEMGFCIILGSFWNS 413
Query: 415 EFNMFCYGSSLPFQKGSIASKLSKISTTFRAWELPFEINVSCRECHCGSCLLRDELSKDA 474
EFN+FCYG + F+KGSI S LSKI+TTF AWELP EIN+S R CHCG+CL R+ELSKDA
Sbjct: 414 EFNIFCYGPA-SFRKGSITSTLSKINTTFCAWELPSEINLSSRGCHCGNCLFREELSKDA 472
Query: 475 LPEWIDWQLKKEIVLGFGILSNDLASLLCEPDEHGGFTLIRLMSSGKFELQRYQASWAVA 534
LPEWID QLKKE+VLGFGILSNDLASLLCEPDEHGGFTL+R+MSSGKFELQRY AS A+A
Sbjct: 473 LPEWIDLQLKKEMVLGFGILSNDLASLLCEPDEHGGFTLVRVMSSGKFELQRYHASQAMA 532
Query: 535 RNIEHCHEQGSCLDRQLLYPMNDEKYKFPKI-FHYLKLDYLYAYANGSLTQNLYTKLKKT 593
R++E CHE CL+ LL P++ ++YK+ F YLKL+YLYAYANG+L Q L TKL+KT
Sbjct: 533 RSLEDCHEADLCLESHLLCPLSVKEYKYKSSEFRYLKLNYLYAYANGNLGQILTTKLEKT 592
Query: 594 DMNARDKEPFCAEVHELLCEKLNACGFGQSRLCPAITNVFKDVKLPTSFHEVALRRLWAD 653
+ +++ PFC+EVHELLC+KLNACG G SR PAI+++FKDV LP SFHEVALR+LW D
Sbjct: 593 YSDDQEEAPFCSEVHELLCKKLNACGLGHSRSSPAISSIFKDVTLPASFHEVALRKLWTD 652
Query: 654 LPLELLQLAFLSYSECRKVTGNSQNSLALEFLAVPALPQLPPFSLRKSSSHSNDDIVGPV 713
LPLELLQLAFLSYSECR+V ++QN + LEF AVP LPQLPPF LRK S HS++DIVGPV
Sbjct: 653 LPLELLQLAFLSYSECREVIAHNQNMVPLEFSAVPDLPQLPPFFLRKPSPHSDNDIVGPV 712
Query: 714 IPFPVLLVLHEFHNGYSDSERGQFSLEAEIDLKYNEVMQVAREISVSASSTHMDDHAVSL 773
IPFPVLLV++E GYS SE +FS+EAE+DLKY EVMQVA EI A S H DDH +SL
Sbjct: 713 IPFPVLLVINEVRYGYSSSESDEFSVEAELDLKYKEVMQVACEI---AGSCHPDDHEISL 769
Query: 774 ADDGEDTRVGSSKSKCVYCPVAFNFSAANIVPGNSVYRDSNYDTFIFHVSES---KPCEQ 830
DD + GS K K + + V GNSV+ D+ YDTFIF VSE +P E+
Sbjct: 770 GDDKTEHWDGSLKPKSFS-----TYRQIDNVQGNSVHTDTIYDTFIFKVSEKSCEEPGEK 824
Query: 831 TESVGQEIFDDLCPVELRFDAPVKKFESQDLKAYNLLKRQMSKWQENFDLYKEFCIQSNF 890
TESVG+E+FDDLCP+ LRFDAPV KFE Q L+A+ LLK +MSKWQ +FDLY EFC QS F
Sbjct: 825 TESVGEEMFDDLCPITLRFDAPVTKFEQQSLEAFTLLKLKMSKWQNSFDLYNEFCSQSGF 884
>Medtr1g071240.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:31582853-31578503 | 20130731
Length = 1126
Score = 142 bits (359), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 84/163 (51%), Positives = 104/163 (63%), Gaps = 4/163 (2%)
Query: 700 KSSSHSNDDIVGPVIPFPVLLVLHEFHNGYSDSERG--QFSLEAEIDLKYNEVMQVAREI 757
K+S HSNDDIVGPVIPF VLLV+ E G S+ G +FS +A++ LKY EVMQ+A EI
Sbjct: 959 KTSPHSNDDIVGPVIPFAVLLVVDEVRYGIKSSDLGSIEFSDDAKLGLKYKEVMQMAGEI 1018
Query: 758 SV-SASSTHMDDHAVSLADDGEDTRVGSSKSKCVYCPVAFNFSAANIVPGNSVYRDSNYD 816
V S S H DDHAVSL + + + + NS+Y D+ YD
Sbjct: 1019 DVLSHRSMHPDDHAVSLLMTKRNPGLILQNQLFRHIVQRLESLSHRQCTWNSIYTDTIYD 1078
Query: 817 TFIFHVSESKPCEQTESVGQEIFDDLCPVELRFDAPVKKFESQ 859
TFIFHV ++ CEQTE VG+E+FDDL P+ELRF+APVKKFE Q
Sbjct: 1079 TFIFHVLDN-SCEQTEPVGEEMFDDLWPIELRFNAPVKKFEHQ 1120