Miyakogusa Predicted Gene

Lj5g3v0999930.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0999930.1 Non Characterized Hit- tr|K4CVK6|K4CVK6_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,44.35,6e-19,LTP_2,Bifunctional inhibitor/plant lipid transfer
protein/seed storage helical domain; seg,NULL; Bif,CUFF.54486.1
         (196 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g071720.1 | Lipid transfer protein | HC | chr1:31856691-31...   163   1e-40
Medtr1g071720.2 | Lipid transfer protein | HC | chr1:31856691-31...   157   8e-39
Medtr7g095250.1 | Lipid transfer protein | HC | chr7:38117812-38...    99   3e-21
Medtr1g103420.1 | Lipid transfer protein | HC | chr1:46817645-46...    98   4e-21
Medtr5g006940.1 | Lipid transfer protein | HC | chr5:1143135-114...    90   2e-18
Medtr1g103450.1 | Lipid transfer protein | HC | chr1:46824422-46...    54   9e-08
Medtr7g095230.1 | Lipid transfer protein | HC | chr7:38109826-38...    52   4e-07
Medtr1g103490.1 | Lipid transfer protein | HC | chr1:46837798-46...    52   5e-07
Medtr5g006950.1 | Lipid transfer protein | HC | chr5:1146399-114...    47   8e-06

>Medtr1g071720.1 | Lipid transfer protein | HC |
           chr1:31856691-31855319 | 20130731
          Length = 190

 Score =  163 bits (412), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 89/191 (46%), Positives = 121/191 (63%), Gaps = 9/191 (4%)

Query: 1   MGHLNPFQMTLVIMMLLSATLVINLVTVTGQISTPCTTSMITNFTPCANYITGSTNNNGL 60
           MGHL+ FQM ++   LL    + ++  V GQISTPCTTSMI++FTPCAN+ITGSTN NGL
Sbjct: 1   MGHLSIFQMKVISTFLL----ITSVKLVFGQISTPCTTSMISSFTPCANFITGSTNYNGL 56

Query: 61  V-PSATCCDAFKSLMGTNMQCACLLVTANVPLPL-PINRALALFLPQACNVNGMPSQCKX 118
           + PS++CCD+ +S+M T+M CACLL+TANVP  L PINR L+ FLPQ+CN+NG+ +QCK 
Sbjct: 57  ITPSSSCCDSLQSMMSTSMDCACLLITANVPFQLPPINRVLSFFLPQSCNLNGLHAQCKA 116

Query: 119 XXXXXXXXXXXMLVPKDPTIXXXXXXXXXXQVSKTAAIAEVRK--LEHVXXXXXXXXXXT 176
                      +     P++          QV +T  +A+  K  ++H            
Sbjct: 117 SGSPLPAPGPAIFGSNVPSLPPINASPLSSQVDETIEVADSPKYVIQH-SAIAPAPTKLA 175

Query: 177 PMKHNRPRKVQ 187
           PMKH+RPRK+Q
Sbjct: 176 PMKHSRPRKLQ 186


>Medtr1g071720.2 | Lipid transfer protein | HC |
           chr1:31856691-31855319 | 20130731
          Length = 189

 Score =  157 bits (396), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 88/191 (46%), Positives = 120/191 (62%), Gaps = 10/191 (5%)

Query: 1   MGHLNPFQMTLVIMMLLSATLVINLVTVTGQISTPCTTSMITNFTPCANYITGSTNNNGL 60
           MGHL+ FQM ++   LL    + ++  V GQISTPCTTSMI++FTPCAN+ITGSTN NGL
Sbjct: 1   MGHLSIFQMKVISTFLL----ITSVKLVFGQISTPCTTSMISSFTPCANFITGSTNYNGL 56

Query: 61  V-PSATCCDAFKSLMGTNMQCACLLVTANVPLPL-PINRALALFLPQACNVNGMPSQCKX 118
           + PS++CCD+ +S+M T+M CACLL+TANVP  L PINR L+ FLPQ+CN+NG+ +QCK 
Sbjct: 57  ITPSSSCCDSLQSMMSTSMDCACLLITANVPFQLPPINRVLSFFLPQSCNLNGLHAQCKA 116

Query: 119 XXXXXXXXXXXMLVPKDPTIXXXXXXXXXXQVSKTAAIAEVRK--LEHVXXXXXXXXXXT 176
                      +     P++          Q  +T  +A+  K  ++H            
Sbjct: 117 SGSPLPAPGPAIFGSNVPSLPPINASPLSSQ-DETIEVADSPKYVIQH-SAIAPAPTKLA 174

Query: 177 PMKHNRPRKVQ 187
           PMKH+RPRK+Q
Sbjct: 175 PMKHSRPRKLQ 185


>Medtr7g095250.1 | Lipid transfer protein | HC |
           chr7:38117812-38119644 | 20130731
          Length = 180

 Score = 99.0 bits (245), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 49/77 (63%), Positives = 60/77 (77%), Gaps = 2/77 (2%)

Query: 42  TNFTPCANYITGSTNNNGLVPSATCCDAFKSLMGTNMQCACLLVTANVPL-PLPINRALA 100
           + FTPCAN ITGSTNN GLVPS TCCD+ +SLM TNM CACL++++N  +  LPIN+ LA
Sbjct: 4   STFTPCANIITGSTNN-GLVPSTTCCDSLRSLMSTNMDCACLMMSSNAQIFQLPINQVLA 62

Query: 101 LFLPQACNVNGMPSQCK 117
           + L QACN+NG   QCK
Sbjct: 63  ISLSQACNINGASVQCK 79


>Medtr1g103420.1 | Lipid transfer protein | HC |
           chr1:46817645-46816110 | 20130731
          Length = 217

 Score = 98.2 bits (243), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 55/105 (52%), Positives = 70/105 (66%), Gaps = 5/105 (4%)

Query: 17  LSATLVINLV---TVTGQISTPCTTSMITN-FTPCANYITGSTNNNGLVPSATCCDAFKS 72
           L+  LVIN+V       QI+TPC  S I+  FTPC  ++TGS+ N G  P+  CC A KS
Sbjct: 10  LAIILVINIVMAGPANAQINTPCNPSTISTLFTPCMGFLTGSSAN-GTSPTTECCGALKS 68

Query: 73  LMGTNMQCACLLVTANVPLPLPINRALALFLPQACNVNGMPSQCK 117
           L  + M C CLLVTA+VP  +PINR LA+ LP+ACN+ G+P QCK
Sbjct: 69  LTSSGMNCLCLLVTASVPFKIPINRTLAISLPRACNMPGVPVQCK 113


>Medtr5g006940.1 | Lipid transfer protein | HC |
           chr5:1143135-1141543 | 20130731
          Length = 212

 Score = 89.7 bits (221), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 50/108 (46%), Positives = 70/108 (64%), Gaps = 7/108 (6%)

Query: 16  LLSATLVINLVTV-----TGQISTPCTTSMITN-FTPCANYITGSTNNNGLVPSATCCDA 69
           L   T+V+ +VT        QI+TPC  SMI++  +PC +++T S+ N G  P+A CC+A
Sbjct: 7   LYRLTVVLAVVTAMAAPAYAQITTPCNMSMISSTISPCLSFLTNSSGN-GTSPTADCCNA 65

Query: 70  FKSLMGTNMQCACLLVTANVPLPLPINRALALFLPQACNVNGMPSQCK 117
            K+L   +  C CL+ T NVP  LPINR LA+ LP+ACN+ G+P QCK
Sbjct: 66  IKTLTSGSKDCMCLIATGNVPFALPINRTLAISLPRACNLPGVPLQCK 113


>Medtr1g103450.1 | Lipid transfer protein | HC |
           chr1:46824422-46825180 | 20130731
          Length = 154

 Score = 53.9 bits (128), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 37/105 (35%), Positives = 58/105 (55%), Gaps = 8/105 (7%)

Query: 14  MMLLSATLVINLVTVTGQISTPCTTSMITNFTPCANYITGSTNNNGLVPSATCCDAFKSL 73
           M L+  TL +    VT Q +  CT ++++   PC  Y+ G    N   P+A CC    ++
Sbjct: 8   MGLVFVTLTLLCAGVTAQSN--CTDALMS-LMPCLGYVRG----NSPTPTAGCCTQLANV 60

Query: 74  MGTNMQCACLLVTANVPLPLPINRALALFLPQACNVNGMP-SQCK 117
           + +  +C CL++ +++   L IN+ LAL LP ACNV   P SQC+
Sbjct: 61  VKSQPECLCLIIGSDLGSSLGINKTLALALPAACNVETPPVSQCE 105


>Medtr7g095230.1 | Lipid transfer protein | HC |
           chr7:38109826-38108564 | 20130731
          Length = 184

 Score = 51.6 bits (122), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 39/102 (38%), Positives = 56/102 (54%), Gaps = 10/102 (9%)

Query: 13  IMMLLSATLV-INLVTVT-GQISTPCTTSMITNFTPCANYITGSTNNNGLVPSATCCDAF 70
           I MLLS   V + L  VT  Q  + C   +I+  +PC +YITG T+     PS+ CC   
Sbjct: 6   IEMLLSMLFVMVALRGVTVAQTDSNCANVLIS-LSPCLDYITGQTST----PSSGCCSQL 60

Query: 71  KSLMGTNMQCACLLV---TANVPLPLPINRALALFLPQACNV 109
            S++G+  QC C +V    +++   L IN+  AL LP ACN+
Sbjct: 61  ASVVGSQPQCLCEVVDGGASSIAASLNINQTRALALPMACNI 102


>Medtr1g103490.1 | Lipid transfer protein | HC |
           chr1:46837798-46839766 | 20130731
          Length = 156

 Score = 51.6 bits (122), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 31/82 (37%), Positives = 47/82 (57%), Gaps = 6/82 (7%)

Query: 38  TSMITNFTPCANYITGSTNNNGLVPSATCCDAFKSLMGTNMQCAC-LLVTANVPLPLPIN 96
           T+++ N +PC +YITG ++     P++ CC    S++ +  QC C +L      L + +N
Sbjct: 29  TNVLVNLSPCLDYITGKSS----TPTSGCCTQLASVVKSQPQCLCQVLDGGGSSLGIKVN 84

Query: 97  RALALFLPQACNVNGMP-SQCK 117
           +  AL LP ACNV   P SQCK
Sbjct: 85  QTQALALPSACNVQTPPTSQCK 106


>Medtr5g006950.1 | Lipid transfer protein | HC |
           chr5:1146399-1147714 | 20130731
          Length = 168

 Score = 47.4 bits (111), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 34/99 (34%), Positives = 50/99 (50%), Gaps = 6/99 (6%)

Query: 21  LVINLVTVTGQISTPCTTSMITNFTPCANYITGSTNNNGLVPSATCCDAFKSLMGTNMQC 80
           LV+  +   G  +    T+++ + +PC NYITG    N   PS+ CC    S++ +   C
Sbjct: 12  LVVIAMMCAGATAQSSCTNVLVSLSPCLNYITG----NSSTPSSGCCSNLASVVSSQPLC 67

Query: 81  ACLLVTANV-PLPLPINRALALFLPQACNVNGMP-SQCK 117
            C ++      L + IN+  AL LP AC V   P SQCK
Sbjct: 68  LCQVLGGGASSLGISINQTQALALPGACKVQTPPTSQCK 106