Miyakogusa Predicted Gene

Lj5g3v0805140.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0805140.1 Non Characterized Hit- tr|J3N661|J3N661_ORYBR
Uncharacterized protein OS=Oryza brachyantha
GN=OB11G1,41.67,8e-19,Ovate,Ovate  protein family, C-terminal;
seg,NULL; A_thal_3678: uncharacterized plant-specific
domai,NODE_3877_length_1362_cov_50.279736.path2.1
         (294 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g105780.1 | ovate transcriptional repressor | HC | chr7:42...   231   6e-61
Medtr1g111640.1 | ovate transcriptional repressor | HC | chr1:50...   157   1e-38
Medtr1g058000.1 | ovate transcriptional repressor | LC | chr1:25...   129   3e-30
Medtr1g072110.1 | ovate transcriptional repressor | HC | chr1:31...    72   9e-13
Medtr7g095150.1 | ovate transcriptional repressor | HC | chr7:38...    69   6e-12
Medtr1g103640.1 | ovate transcriptional repressor | HC | chr1:46...    63   4e-10
Medtr2g102140.1 | ovate transcriptional repressor | HC | chr2:43...    60   2e-09
Medtr4g012060.1 | ovate transcriptional repressor | HC | chr4:32...    56   3e-08
Medtr0907s0020.1 | ovate transcriptional repressor | HC | scaffo...    54   2e-07
Medtr4g052040.1 | ovate transcriptional repressor | HC | chr4:18...    51   2e-06
Medtr7g105790.1 | ovate transcriptional repressor | HC | chr7:42...    50   2e-06

>Medtr7g105780.1 | ovate transcriptional repressor | HC |
           chr7:42928893-42930099 | 20130731
          Length = 287

 Score =  231 bits (589), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 151/303 (49%), Positives = 172/303 (56%), Gaps = 50/303 (16%)

Query: 1   MGKKMKLIPSLLMRITELXXXXXXXXXXXXXXXXXWPWPSCHQQPRTLSFRA-------- 52
           MGKK  L  S L++ TEL                 WPWP CHQ P+TLSFRA        
Sbjct: 1   MGKKKTLNISSLLKNTELKYSSSSSS---------WPWPYCHQ-PKTLSFRADNINKDDT 50

Query: 53  ---VNSAYLDATMDMLETSESFFTVSPEXXXXXXXXXXXDELEHSRTRGSDSVETVIRGL 109
              +NS YLDA       SESF TVSP             E     ++  DS+ETVIRGL
Sbjct: 51  FKTINSVYLDA-------SESFSTVSPNCDSSFSKASNDQE-----SKQVDSIETVIRGL 98

Query: 110 RSADRLFFEPEKTSSILE--TKAA---GTATATLPPFKDSVVLSVDSRDPYVDFRKSMEE 164
            S+DR FFEP++T+SILE   KAA   G  T +LP FKDSVVLS++SRDPYVDFRKSMEE
Sbjct: 99  -SSDRFFFEPDETNSILEVNNKAAAIGGGETQSLP-FKDSVVLSMESRDPYVDFRKSMEE 156

Query: 165 MVEAHGVKDWEHLQELLCWYLRVNDKTNHGYIVGAFVDLLVAIAFAXXXXXXXXXXXXXX 224
           +VEAH VKDWE LQELL WYL+VN+K NHGYIVGAFVDLLV + FA              
Sbjct: 157 IVEAHDVKDWEGLQELLSWYLKVNEKINHGYIVGAFVDLLVGLTFASTSSSFSTSSSSSS 216

Query: 225 XXXXXXXXXXXXXXXXXXXXXXXXXCRTRCVSCLE--EVDAPSPSSSLLLEQVREEINLE 282
                                      TRCVSC E  E +  +PSSSLLLEQVREEI+ E
Sbjct: 217 RSPSSPLSFYSSSLSSSY--------STRCVSCSEAREEEVDTPSSSLLLEQVREEIDCE 268

Query: 283 DEV 285
           DEV
Sbjct: 269 DEV 271


>Medtr1g111640.1 | ovate transcriptional repressor | HC |
           chr1:50463921-50463114 | 20130731
          Length = 254

 Score =  157 bits (396), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 98/224 (43%), Positives = 130/224 (58%), Gaps = 44/224 (19%)

Query: 1   MGKKMKLIPSLLMRITELXXXXXXXXXXXXXXXXXWPW---PSCHQQPRTLSFR------ 51
           MGKK   +PSL  +  E+                  PW   PSC   P+TLSFR      
Sbjct: 1   MGKKNLKLPSLF-KTKEISQRKQH------------PWQFLPSC-GHPKTLSFRVGAAST 46

Query: 52  ---------AVNSAYLDATMDM-LETSESFFTVSPEXXXXXXXXXXXDELEHSRTRGSDS 101
                     VNS + D T ++ +ET +S+FT S E              ++      +S
Sbjct: 47  SAADDHIFKTVNSVFFDQTDNINIETPKSWFTTSSESASFSTESE-----DYYCYNDGES 101

Query: 102 VETVIRGLRSADRLFFEPEKTSSILETKAAGTATATLPPFKDSVVLSVDSRDPYVDFRKS 161
           +ET++RG++S +RLFFE E TSSILE      A A   PFK+SVVL+++S DPY DF++S
Sbjct: 102 LETLVRGVKS-ERLFFEAEDTSSILEK-----AKANGFPFKESVVLAMESEDPYEDFKRS 155

Query: 162 MEEMVEAHGVKDWEHLQELLCWYLRVNDKTNHGYIVGAFVDLLV 205
           MEE+VE+HGVKDW+ L+ELL WYL+VN K NHG+IVGAFVDLL+
Sbjct: 156 MEEIVESHGVKDWDGLEELLSWYLKVNGKNNHGFIVGAFVDLLI 199


>Medtr1g058000.1 | ovate transcriptional repressor | LC |
           chr1:25531592-25530909 | 20130731
          Length = 227

 Score =  129 bits (325), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 76/183 (41%), Positives = 108/183 (59%), Gaps = 35/183 (19%)

Query: 43  QQPRTLSFRA---------VNSAYLDAT-MDMLETSESFFTVSPEXXXXXXXXXXXDELE 92
            QP+TLSFRA         +N  ++ +T  D+LETS+S  T                  E
Sbjct: 24  NQPKTLSFRANINDTLFKSINPTFVGSTNKDILETSDSILT--------------EFSYE 69

Query: 93  HSRTRGSDSVETVIRGLRSADRLFFEPEKTSSILETKAAGTATAT----------LPPFK 142
           + R    +S+ET+I GL   DRLFF+P +TSSIL+TK     ++           L PFK
Sbjct: 70  YFRGNSGNSIETMICGL-CLDRLFFDPNETSSILKTKEIINISSNEIISSNNNNLLLPFK 128

Query: 143 DSVVLSVDSRDPYVDFRKSMEEMVEAHGVKDWEHLQELLCWYLRVNDKTNHGYIVGAFVD 202
           +++ +S+DSR+P  DF++S+ EMVEA+G+ DWE L++LL WY  VN+K NHG+I+ AF D
Sbjct: 129 NTLEVSMDSRNPCEDFKESIVEMVEAYGINDWETLEKLLSWYFEVNEKRNHGFIIDAFFD 188

Query: 203 LLV 205
           L V
Sbjct: 189 LFV 191


>Medtr1g072110.1 | ovate transcriptional repressor | HC |
           chr1:31980235-31981441 | 20130731
          Length = 237

 Score = 71.6 bits (174), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 37/72 (51%), Positives = 46/72 (63%), Gaps = 5/72 (6%)

Query: 141 FKDSVVLSVDSRDPYVDFRKSMEEMVEAH----GVK-DWEHLQELLCWYLRVNDKTNHGY 195
           F  SV +   S DPY+DFR+SM+EMVEA      VK +W  L ELL  YL +N K  H +
Sbjct: 163 FNGSVAVPTYSPDPYMDFRRSMQEMVEARPELMDVKSNWNILHELLLCYLALNPKNTHKF 222

Query: 196 IVGAFVDLLVAI 207
           I+GAF DLLV +
Sbjct: 223 ILGAFADLLVTL 234


>Medtr7g095150.1 | ovate transcriptional repressor | HC |
           chr7:38042905-38042233 | 20130731
          Length = 209

 Score = 68.9 bits (167), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 35/73 (47%), Positives = 45/73 (61%), Gaps = 6/73 (8%)

Query: 141 FKDSVVLSVDSRDPYVDFRKSMEEMVEAHG--VKD----WEHLQELLCWYLRVNDKTNHG 194
           F  SV +   S DPY+DFR+SM+EMVEA    +KD    WE L ELL  YL +N    H 
Sbjct: 128 FNGSVAVPTYSPDPYMDFRRSMQEMVEAQPELMKDVKSNWETLHELLLSYLAINPNNTHK 187

Query: 195 YIVGAFVDLLVAI 207
           +I+ AF DL+V +
Sbjct: 188 FILDAFSDLIVTL 200


>Medtr1g103640.1 | ovate transcriptional repressor | HC |
           chr1:46913217-46914470 | 20130731
          Length = 238

 Score = 62.8 bits (151), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 41/106 (38%), Positives = 58/106 (54%), Gaps = 9/106 (8%)

Query: 111 SADRLFFE-PEKTSSILETKAAGT--ATATLPPFKDSVV-LSVDSRDPYVDFRKSMEEMV 166
           ++ R FF  P  ++SI E+ +  T     +L P   SV  +   S +PYVDF +SM+EM+
Sbjct: 74  ASQRFFFSSPGSSNSITESPSNDTLPCNNSLIPRGGSVKRVPKYSVNPYVDFLRSMQEMI 133

Query: 167 EAHG-----VKDWEHLQELLCWYLRVNDKTNHGYIVGAFVDLLVAI 207
           ++         DW++L ELL  YL +N    H YIV AF  LLV I
Sbjct: 134 QSQQQVVDVTNDWDYLHELLLCYLALNPTHTHKYIVQAFTHLLVDI 179


>Medtr2g102140.1 | ovate transcriptional repressor | HC |
           chr2:43952185-43954176 | 20130731
          Length = 311

 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 33/79 (41%), Positives = 49/79 (62%), Gaps = 10/79 (12%)

Query: 137 TLPPFKDSVVLSVDSRDPYVDFRKSMEEMVEAHGVK--------DWEHLQELLCWYLRVN 188
           TLP  ++ V L   S  PY DFR+SM+E+VE+   K        DW+ ++E+L  YL VN
Sbjct: 197 TLP--ENCVALLSYSPSPYDDFRRSMQELVESKYGKIENNQRKIDWDFMEEILFCYLNVN 254

Query: 189 DKTNHGYIVGAFVDLLVAI 207
           +K +H +I+ AFVDL+  +
Sbjct: 255 EKKSHKFILSAFVDLITVM 273


>Medtr4g012060.1 | ovate transcriptional repressor | HC |
           chr4:3236550-3235415 | 20130731
          Length = 291

 Score = 56.2 bits (134), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 27/66 (40%), Positives = 43/66 (65%), Gaps = 4/66 (6%)

Query: 143 DSVVLSVDSRDPYVDFRKSMEEMVEA----HGVKDWEHLQELLCWYLRVNDKTNHGYIVG 198
           + VV+   S  PY DFR+SM+E VEA    +   DW+ ++ELL  Y+ +N+K ++ +I+ 
Sbjct: 184 NCVVVLASSPSPYDDFRRSMQETVEARLRNNESVDWDFMEELLFCYMNLNEKKSYKFILS 243

Query: 199 AFVDLL 204
           AF DL+
Sbjct: 244 AFCDLI 249


>Medtr0907s0020.1 | ovate transcriptional repressor | HC |
           scaffold0907:3445-2806 | 20130731
          Length = 182

 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 27/80 (33%), Positives = 47/80 (58%), Gaps = 4/80 (5%)

Query: 132 GTATATLPPF----KDSVVLSVDSRDPYVDFRKSMEEMVEAHGVKDWEHLQELLCWYLRV 187
           G+  ++L  F     + V +  DS DPY+DFR SM +M+  + +   + L+ELL  +L++
Sbjct: 87  GSEKSSLKGFGRAGNEGVAVEKDSDDPYLDFRHSMLQMILENEIYSKDDLRELLNCFLQL 146

Query: 188 NDKTNHGYIVGAFVDLLVAI 207
           N K +HG I+ AF ++   +
Sbjct: 147 NSKEHHGIIIRAFTEIWNGV 166


>Medtr4g052040.1 | ovate transcriptional repressor | HC |
           chr4:18829097-18830158 | 20130731
          Length = 177

 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 24/64 (37%), Positives = 37/64 (57%)

Query: 140 PFKDSVVLSVDSRDPYVDFRKSMEEMVEAHGVKDWEHLQELLCWYLRVNDKTNHGYIVGA 199
           P  ++V +  DS DPY DF+ SM +M+  + +   + LQ+LL  +L +N    HG IV  
Sbjct: 96  PLMNTVAVEKDSEDPYHDFKHSMLQMIFENEIDSEDDLQDLLRCFLHLNSSCYHGVIVKV 155

Query: 200 FVDL 203
           F D+
Sbjct: 156 FNDI 159


>Medtr7g105790.1 | ovate transcriptional repressor | HC |
           chr7:42946436-42945242 | 20130731
          Length = 199

 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 24/64 (37%), Positives = 40/64 (62%)

Query: 145 VVLSVDSRDPYVDFRKSMEEMVEAHGVKDWEHLQELLCWYLRVNDKTNHGYIVGAFVDLL 204
           V +  DS DPY+DFR SM +M+  + +   + L+ELL  +L++N   +HG IV AF ++ 
Sbjct: 112 VAVEKDSEDPYLDFRHSMLQMILENEIYSKDDLRELLNCFLQLNAPYHHGVIVRAFTEIW 171

Query: 205 VAIA 208
             ++
Sbjct: 172 NGVS 175