Miyakogusa Predicted Gene
- Lj5g3v0279130.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj5g3v0279130.2 Non Characterized Hit- tr|B9R8Q0|B9R8Q0_RICCO
Brca1 interacting protein helicase 1 brip1, putative
O,57.27,0,seg,NULL; Helicase_C_2,ATP-dependent helicase, C-terminal;
DEAD_2,DEAD2; P-loop containing nucleosid,CUFF.52700.2
(1083 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr1g026490.1 | fanconi anemia group J-like protein | HC | chr... 1680 0.0
Medtr2g102150.3 | regulator of telomere elongation helicase-like... 295 2e-79
Medtr2g102150.2 | regulator of telomere elongation helicase-like... 295 2e-79
Medtr2g102150.1 | regulator of telomere elongation helicase-like... 295 2e-79
Medtr0147s0060.1 | rad3-related DNA helicase family protein | HC... 162 1e-39
Medtr2g084735.1 | DNA repair helicase (rad3) | HC | chr2:3593377... 147 8e-35
Medtr2g084735.2 | DNA repair helicase (rad3) | HC | chr2:3593566... 147 8e-35
>Medtr1g026490.1 | fanconi anemia group J-like protein | HC |
chr1:8631572-8617169 | 20130731
Length = 1224
Score = 1680 bits (4350), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 825/1091 (75%), Positives = 913/1091 (83%), Gaps = 27/1091 (2%)
Query: 1 MAVLAARKHYCTNKNILGKENLDEECKLLLKDQAMGCPEFKNAHKVKGHPSLQKGGSNEV 60
MA+LA+RKHYCTNKNI G+EN+DEECK LLKD+ +GCPEFK+ KVK HPSLQKGG NEV
Sbjct: 149 MALLASRKHYCTNKNIRGRENIDEECKQLLKDKVIGCPEFKSVQKVKAHPSLQKGGCNEV 208
Query: 61 HDIEDLVKVGQVVKGCSYYAARSMSDDAQLVFCPYSYIINPIIRGAMDVDIRGAIVILDE 120
HDIEDLVKVGQ VKGCSYYAARSMS+DAQLVFCPY+YIINP+IRGAM+VDI+GAIVI DE
Sbjct: 209 HDIEDLVKVGQSVKGCSYYAARSMSNDAQLVFCPYNYIINPVIRGAMEVDIQGAIVIFDE 268
Query: 121 AHNIEDITRDAGSVDIEEDVLDKLQVELQQLCSSNTAIYQPLYEMTQGLTSWIEQKKNKL 180
AHNIEDI+RDAGSVDIEED LDKLQ+EL+QLC S+ AIY PLYEMTQGLTSW+E KK L
Sbjct: 269 AHNIEDISRDAGSVDIEEDTLDKLQMELEQLCHSDIAIYLPLYEMTQGLTSWMEHKKTTL 328
Query: 181 EKRDFQHYVSCWTGDKALRELEEANISKQCFPILLECATKAIKVATDLETDQPRLSGMSV 240
EKRDFQHYVSCWTGDKAL+ELEEANISKQCFPILLECATKAIKV TDLE D+P LSGMSV
Sbjct: 329 EKRDFQHYVSCWTGDKALQELEEANISKQCFPILLECATKAIKVYTDLEEDEPHLSGMSV 388
Query: 241 ITLEGLFSSLTYFFSRNGSHMLDYQLSLQRCVRKDDRRGFGNWMHTFSLWCLNPAVVFRD 300
ITLEGLFSSL+YFFS+NGSHMLDYQL+LQR VRK DRR GNW HT SLWCLNPA VFR+
Sbjct: 389 ITLEGLFSSLSYFFSKNGSHMLDYQLALQRTVRKHDRRASGNWTHTLSLWCLNPAAVFRE 448
Query: 301 VADLSLSVILTSGTLSPMPSFSSELGVQFETSLEAPHVIDVDSQVWPAIISTGPGNYPLN 360
VADLSLSVILTSGTLSPM SFSSELGV+FET+LEAPHVID DSQVWPAIISTGPGNYPLN
Sbjct: 449 VADLSLSVILTSGTLSPMMSFSSELGVKFETNLEAPHVIDTDSQVWPAIISTGPGNYPLN 508
Query: 361 ASYKTADAYEFQDAVGRSLEEIFKIVPGGCLVFFPSYKLMEKLCNRWSETGQWSRLHTEK 420
ASYKTAD Y FQDAVGRSLEEIFKIV GGCLVFFPSYKLMEKLC RWSETGQWSRL EK
Sbjct: 509 ASYKTADVYAFQDAVGRSLEEIFKIVSGGCLVFFPSYKLMEKLCTRWSETGQWSRLKAEK 568
Query: 421 SLFVEPRGGSQDDFELVLKGYYDSIHHGKRPALGRKRRIKKIDLNHFYTVDSPQDSKKGG 480
LFVE +GGSQDDFEL LKGYYDSIHH K+PA GRKRRIKK DLNHF+ VDS QD+KKGG
Sbjct: 569 PLFVESKGGSQDDFELTLKGYYDSIHHDKKPASGRKRRIKKTDLNHFHAVDSIQDTKKGG 628
Query: 481 AALLGVCRGKVSEGIDFSDENARVVIIVGIPFPNINDVQVALKKKYNDTFKSSKNLLSGS 540
AALLGVCRGKVSEGIDFSD+NAR VIIVGIPFPN+ D+QVALKKKYNDTFKSSK LL G+
Sbjct: 629 AALLGVCRGKVSEGIDFSDDNARAVIIVGIPFPNMYDIQVALKKKYNDTFKSSKQLLGGN 688
Query: 541 QWYCHQAFRALNQAAGRCIRHSLDYGAIILLDERFREERNRALISKWLRRPLRVYDSFNL 600
+WYCHQAFRALNQAAGRCIRH LDYGAIILLDERFREERN+A ISKWLR+PLRVYDSF L
Sbjct: 689 EWYCHQAFRALNQAAGRCIRHRLDYGAIILLDERFREERNKAFISKWLRKPLRVYDSFEL 748
Query: 601 SLEGLKSFFEDAKERFSMNTVHISQNL-VFDSDGVQNKEQNTRL--KKNQKLNKSVNGRE 657
SLE LKSFFE+AKER+ ++TVH + NL + D DGVQNK+ N KKNQKLNKS NG E
Sbjct: 749 SLEKLKSFFENAKERYGLDTVHATTNLNLNDDDGVQNKDGNMWFPKKKNQKLNKSRNGAE 808
Query: 658 KDTSMIEDNISIPT--LSSHDLAESQLFAQRTSNTYNFEDHINPQCCNLTERLTEKLPVS 715
K+TS+IED ISIPT LSSH+L ESQ A R SNTY+F+DHIN QCCNLTER TE V+
Sbjct: 809 KETSVIEDKISIPTPSLSSHNLGESQPSAPRNSNTYSFKDHINLQCCNLTERFTEASSVT 868
Query: 716 ITHEETSVVKETPCIDVGHDAGSPDYS-DAYSNCTIIET-SAQFPPDHLSSHQMXXXXXX 773
TH+ET VKE+P + AGS YS D S+CTIIE S+ FP + ++
Sbjct: 869 FTHDETPTVKESPSSHIASGAGSAYYSKDDNSDCTIIEDHSSSFPVSSTTGSKISN---- 924
Query: 774 XXXXXXXXXITVTPEKNIATTNIPEMDSSLNLSVNSHNQKRRK----PFINLIEEENYGA 829
TVTPEK++ NIPE SSLN SVNSHNQKRRK P+I+LIEEEN+ A
Sbjct: 925 ----------TVTPEKSVTANNIPE--SSLNSSVNSHNQKRRKPTVVPYIDLIEEENHEA 972
Query: 830 PCATSLTWYSKSSVAVTEATHGTKPGLERNLKSHSPQIPTSNLPGTCSLTAPLLDKRLQI 889
++ WY+KSSV V EATH T+ L R SPQ+PTSNLPG+CSLT PLLDKRL +
Sbjct: 973 SSVSTPKWYTKSSVEVREATHETECSLGRISNLQSPQLPTSNLPGSCSLTIPLLDKRLLL 1032
Query: 890 FCSLCKNPLGRPENDLFLTCSLISSSKVYLRSLLKQKLKTYTTDTSDSLPVILTDSSCVD 949
FCSLCKNPLGR EN L LTCSLISSS V+LR LLK++L TYT D S+PVI+TDSS VD
Sbjct: 1033 FCSLCKNPLGRHENHLSLTCSLISSSIVHLRFLLKKRLATYTADAEKSVPVIVTDSSFVD 1092
Query: 950 QRILNRIPKSAPEQGIWCLEDGCVFSTVFCPFCSNRNNLLGVQVMATNSSNVQLLEQILF 1009
QR+ NR+PKS E+GIWC EDGCVFST+FCPFCSN NNLLGVQ+MATNSSN +LL++ILF
Sbjct: 1093 QRVCNRVPKSTQEEGIWCPEDGCVFSTIFCPFCSNTNNLLGVQIMATNSSNAKLLDKILF 1152
Query: 1010 YFDSLVVKNHEETGKGASEEEDLLPVIDSGTDEVAVLNSIDRYSYLPQPAKSEVWKIRKS 1069
+FDSL VK EE GK ASEE D P+ DSG D VA LNS ++YSY+PQP KSEVWK RKS
Sbjct: 1153 FFDSLEVKYQEEAGKSASEEVDFSPITDSGMDGVAALNSFEKYSYVPQPGKSEVWKSRKS 1212
Query: 1070 KPRLRSSPYAE 1080
KP+LR SPYAE
Sbjct: 1213 KPKLRGSPYAE 1223
>Medtr2g102150.3 | regulator of telomere elongation helicase-like
protein | HC | chr2:43966024-43954610 | 20130731
Length = 1004
Score = 295 bits (755), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 201/646 (31%), Positives = 300/646 (46%), Gaps = 75/646 (11%)
Query: 1 MAVLAARKHYCTNKNI--LGKENLDEECKLLLKDQAMG---CPEFKNA-HKVKGHPSLQK 54
M VL +R+ +C + + L C+ + +A C F +K +P+L
Sbjct: 123 MTVLGSREQFCIHDEVKLLRGRTQTNACRFACRRRAKQKRRCNHFNQVLDYLKQNPNL-- 180
Query: 55 GGSNEVHDIEDLVKVGQVVKGCSYYAARSMSDDAQLVFCPYSYIINPIIRGAMDVDIRGA 114
E DIEDLV +G+ C Y+ A+ + ++F PY+Y+I+ R A+ + +
Sbjct: 181 --GEEPVDIEDLVNIGKTSGPCPYHLAKELHKAVDIIFAPYNYLIDRGKRKALQISWSNS 238
Query: 115 IVILDEAHNIEDITRDAGSVDIEEDVLDKLQVELQQLC-------------SSNTAIYQP 161
I+I DEAHN+E I DA S D+ +L E Q S N +
Sbjct: 239 ILIFDEAHNLESICADAASFDLPSWLLTACISEAQSCVDLLIERRNKSNDKSQNPDDFAI 298
Query: 162 LYEMTQGLTSWIEQKKNKLEKRDFQHYVSCWTGDKALRELEEANISKQCFPILLECATKA 221
L + L I + + ++ F G L + NI+ + P L T A
Sbjct: 299 LKALLLKLEKRIAEVHIESKELGFTK-----PGPYIFELLADLNITHKTAPKLKSIVTDA 353
Query: 222 IKVATDLETDQPRLSGMSVITLEGLFSSLTYFFSRNG--SHMLDYQLSLQRCVRKDDRRG 279
+T LE D S ++ LE + L F R+G SH Y++ ++
Sbjct: 354 ---STLLEEDSQEKSTSNICRLETMKDILDIIF-RDGRTSHAKYYRVHVKEAEAWAANGS 409
Query: 280 FGNWMHTFSLWCLNPAVVFRDVA-DLSLSVILTSGTLSPMPSFSSELGVQFETSLEAPHV 338
G T S WC NP + + A D S+ILTSGTLSP+ SF+ EL + F LE PHV
Sbjct: 410 LGKVSRTLSWWCFNPGIALEEFAKDGVRSIILTSGTLSPLDSFAEELKLDFPIRLENPHV 469
Query: 339 IDVDSQVWPAIISTGPGNYPLNASYKTADAYEFQDAVGRSLEEIFKIVPGGCLVFFPSYK 398
I + Q+W ++ GP N+SY+T D E++ +G ++ + +IVP G LVFFPSY
Sbjct: 470 IGPN-QIWAGVVPVGPLGRTFNSSYRTRDTMEYKQELGNAIVNLTRIVPDGLLVFFPSYY 528
Query: 399 LMEKLCNRWSETGQ-----WSRLHTEKSLFVEPRGGSQDDFELVLKGYYDSIHHGKRPAL 453
L+E+ W W R+ K +EPR S F +K Y ++
Sbjct: 529 LLEQSIGCWKSLSNDGSSIWERICKNKKPVIEPRESSM--FTSSIKDYLTKLN------- 579
Query: 454 GRKRRIKKIDLNHFYTVDSPQDSKKGGAALLGVCRGKVSEGIDFSDENARVVIIVGIPFP 513
D+ GA VCRGKVSEG+DF+D R V++ G+P+
Sbjct: 580 ---------------------DTTASGAVFFAVCRGKVSEGLDFADHAGRAVVVTGLPYA 618
Query: 514 NINDVQVALKKKYNDTFKSSKN----LLSGSQWYCHQAFRALNQAAGRCIRHSLDYGAII 569
+ D +V LK++Y D ++ +L+G +WY QA RA+NQA GR IRH DYGAII
Sbjct: 619 TVTDPKVRLKREYLDQQSGAQGGSFKVLTGDEWYNQQASRAVNQAVGRVIRHRHDYGAII 678
Query: 570 LLDERFREERNRALISKWLRRPLRVYDSFNLSLEGLKSFFEDAKER 615
DERF + ++ +SKW++ ++ Y F + L FF D + R
Sbjct: 679 FCDERFTQPHRQSQVSKWIQPHIKCYSRFGEVVFTLTRFFRDGRTR 724
>Medtr2g102150.2 | regulator of telomere elongation helicase-like
protein | HC | chr2:43966024-43954610 | 20130731
Length = 1004
Score = 295 bits (755), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 201/646 (31%), Positives = 300/646 (46%), Gaps = 75/646 (11%)
Query: 1 MAVLAARKHYCTNKNI--LGKENLDEECKLLLKDQAMG---CPEFKNA-HKVKGHPSLQK 54
M VL +R+ +C + + L C+ + +A C F +K +P+L
Sbjct: 123 MTVLGSREQFCIHDEVKLLRGRTQTNACRFACRRRAKQKRRCNHFNQVLDYLKQNPNL-- 180
Query: 55 GGSNEVHDIEDLVKVGQVVKGCSYYAARSMSDDAQLVFCPYSYIINPIIRGAMDVDIRGA 114
E DIEDLV +G+ C Y+ A+ + ++F PY+Y+I+ R A+ + +
Sbjct: 181 --GEEPVDIEDLVNIGKTSGPCPYHLAKELHKAVDIIFAPYNYLIDRGKRKALQISWSNS 238
Query: 115 IVILDEAHNIEDITRDAGSVDIEEDVLDKLQVELQQLC-------------SSNTAIYQP 161
I+I DEAHN+E I DA S D+ +L E Q S N +
Sbjct: 239 ILIFDEAHNLESICADAASFDLPSWLLTACISEAQSCVDLLIERRNKSNDKSQNPDDFAI 298
Query: 162 LYEMTQGLTSWIEQKKNKLEKRDFQHYVSCWTGDKALRELEEANISKQCFPILLECATKA 221
L + L I + + ++ F G L + NI+ + P L T A
Sbjct: 299 LKALLLKLEKRIAEVHIESKELGFTK-----PGPYIFELLADLNITHKTAPKLKSIVTDA 353
Query: 222 IKVATDLETDQPRLSGMSVITLEGLFSSLTYFFSRNG--SHMLDYQLSLQRCVRKDDRRG 279
+T LE D S ++ LE + L F R+G SH Y++ ++
Sbjct: 354 ---STLLEEDSQEKSTSNICRLETMKDILDIIF-RDGRTSHAKYYRVHVKEAEAWAANGS 409
Query: 280 FGNWMHTFSLWCLNPAVVFRDVA-DLSLSVILTSGTLSPMPSFSSELGVQFETSLEAPHV 338
G T S WC NP + + A D S+ILTSGTLSP+ SF+ EL + F LE PHV
Sbjct: 410 LGKVSRTLSWWCFNPGIALEEFAKDGVRSIILTSGTLSPLDSFAEELKLDFPIRLENPHV 469
Query: 339 IDVDSQVWPAIISTGPGNYPLNASYKTADAYEFQDAVGRSLEEIFKIVPGGCLVFFPSYK 398
I + Q+W ++ GP N+SY+T D E++ +G ++ + +IVP G LVFFPSY
Sbjct: 470 IGPN-QIWAGVVPVGPLGRTFNSSYRTRDTMEYKQELGNAIVNLTRIVPDGLLVFFPSYY 528
Query: 399 LMEKLCNRWSETGQ-----WSRLHTEKSLFVEPRGGSQDDFELVLKGYYDSIHHGKRPAL 453
L+E+ W W R+ K +EPR S F +K Y ++
Sbjct: 529 LLEQSIGCWKSLSNDGSSIWERICKNKKPVIEPRESSM--FTSSIKDYLTKLN------- 579
Query: 454 GRKRRIKKIDLNHFYTVDSPQDSKKGGAALLGVCRGKVSEGIDFSDENARVVIIVGIPFP 513
D+ GA VCRGKVSEG+DF+D R V++ G+P+
Sbjct: 580 ---------------------DTTASGAVFFAVCRGKVSEGLDFADHAGRAVVVTGLPYA 618
Query: 514 NINDVQVALKKKYNDTFKSSKN----LLSGSQWYCHQAFRALNQAAGRCIRHSLDYGAII 569
+ D +V LK++Y D ++ +L+G +WY QA RA+NQA GR IRH DYGAII
Sbjct: 619 TVTDPKVRLKREYLDQQSGAQGGSFKVLTGDEWYNQQASRAVNQAVGRVIRHRHDYGAII 678
Query: 570 LLDERFREERNRALISKWLRRPLRVYDSFNLSLEGLKSFFEDAKER 615
DERF + ++ +SKW++ ++ Y F + L FF D + R
Sbjct: 679 FCDERFTQPHRQSQVSKWIQPHIKCYSRFGEVVFTLTRFFRDGRTR 724
>Medtr2g102150.1 | regulator of telomere elongation helicase-like
protein | HC | chr2:43966024-43954610 | 20130731
Length = 1004
Score = 295 bits (755), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 201/646 (31%), Positives = 300/646 (46%), Gaps = 75/646 (11%)
Query: 1 MAVLAARKHYCTNKNI--LGKENLDEECKLLLKDQAMG---CPEFKNA-HKVKGHPSLQK 54
M VL +R+ +C + + L C+ + +A C F +K +P+L
Sbjct: 123 MTVLGSREQFCIHDEVKLLRGRTQTNACRFACRRRAKQKRRCNHFNQVLDYLKQNPNL-- 180
Query: 55 GGSNEVHDIEDLVKVGQVVKGCSYYAARSMSDDAQLVFCPYSYIINPIIRGAMDVDIRGA 114
E DIEDLV +G+ C Y+ A+ + ++F PY+Y+I+ R A+ + +
Sbjct: 181 --GEEPVDIEDLVNIGKTSGPCPYHLAKELHKAVDIIFAPYNYLIDRGKRKALQISWSNS 238
Query: 115 IVILDEAHNIEDITRDAGSVDIEEDVLDKLQVELQQLC-------------SSNTAIYQP 161
I+I DEAHN+E I DA S D+ +L E Q S N +
Sbjct: 239 ILIFDEAHNLESICADAASFDLPSWLLTACISEAQSCVDLLIERRNKSNDKSQNPDDFAI 298
Query: 162 LYEMTQGLTSWIEQKKNKLEKRDFQHYVSCWTGDKALRELEEANISKQCFPILLECATKA 221
L + L I + + ++ F G L + NI+ + P L T A
Sbjct: 299 LKALLLKLEKRIAEVHIESKELGFTK-----PGPYIFELLADLNITHKTAPKLKSIVTDA 353
Query: 222 IKVATDLETDQPRLSGMSVITLEGLFSSLTYFFSRNG--SHMLDYQLSLQRCVRKDDRRG 279
+T LE D S ++ LE + L F R+G SH Y++ ++
Sbjct: 354 ---STLLEEDSQEKSTSNICRLETMKDILDIIF-RDGRTSHAKYYRVHVKEAEAWAANGS 409
Query: 280 FGNWMHTFSLWCLNPAVVFRDVA-DLSLSVILTSGTLSPMPSFSSELGVQFETSLEAPHV 338
G T S WC NP + + A D S+ILTSGTLSP+ SF+ EL + F LE PHV
Sbjct: 410 LGKVSRTLSWWCFNPGIALEEFAKDGVRSIILTSGTLSPLDSFAEELKLDFPIRLENPHV 469
Query: 339 IDVDSQVWPAIISTGPGNYPLNASYKTADAYEFQDAVGRSLEEIFKIVPGGCLVFFPSYK 398
I + Q+W ++ GP N+SY+T D E++ +G ++ + +IVP G LVFFPSY
Sbjct: 470 IGPN-QIWAGVVPVGPLGRTFNSSYRTRDTMEYKQELGNAIVNLTRIVPDGLLVFFPSYY 528
Query: 399 LMEKLCNRWSETGQ-----WSRLHTEKSLFVEPRGGSQDDFELVLKGYYDSIHHGKRPAL 453
L+E+ W W R+ K +EPR S F +K Y ++
Sbjct: 529 LLEQSIGCWKSLSNDGSSIWERICKNKKPVIEPRESSM--FTSSIKDYLTKLN------- 579
Query: 454 GRKRRIKKIDLNHFYTVDSPQDSKKGGAALLGVCRGKVSEGIDFSDENARVVIIVGIPFP 513
D+ GA VCRGKVSEG+DF+D R V++ G+P+
Sbjct: 580 ---------------------DTTASGAVFFAVCRGKVSEGLDFADHAGRAVVVTGLPYA 618
Query: 514 NINDVQVALKKKYNDTFKSSKN----LLSGSQWYCHQAFRALNQAAGRCIRHSLDYGAII 569
+ D +V LK++Y D ++ +L+G +WY QA RA+NQA GR IRH DYGAII
Sbjct: 619 TVTDPKVRLKREYLDQQSGAQGGSFKVLTGDEWYNQQASRAVNQAVGRVIRHRHDYGAII 678
Query: 570 LLDERFREERNRALISKWLRRPLRVYDSFNLSLEGLKSFFEDAKER 615
DERF + ++ +SKW++ ++ Y F + L FF D + R
Sbjct: 679 FCDERFTQPHRQSQVSKWIQPHIKCYSRFGEVVFTLTRFFRDGRTR 724
>Medtr0147s0060.1 | rad3-related DNA helicase family protein | HC |
scaffold0147:21230-15819 | 20130731
Length = 907
Score = 162 bits (411), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 167/663 (25%), Positives = 282/663 (42%), Gaps = 126/663 (19%)
Query: 4 LAARKHYCTNKNILGKEN---LDEECKLLLKDQAMGCPEFKN------AHKVK---GHPS 51
L +RK+ C N+ +L N ++E C L K + + KN A + K G P
Sbjct: 230 LGSRKNLCINQEVLALGNSSRINERCLELQKKKKNDATKVKNLKAGTGARRTKASSGCPM 289
Query: 52 LQKGG-----SNEVH-----DIEDLVKVGQVVKGCSYYAARSMSDDAQLVFCPYSYIINP 101
L+K NEV DIEDL +G+ + C YY +RSM LV PY +++
Sbjct: 290 LRKRRLQHEFRNEVSQQGPLDIEDLANLGRTMGTCPYYGSRSMVRRVDLVVLPYQSLLSK 349
Query: 102 IIRGAMDVDIRGAIVILDEAH-------NIEDITRDAGSVDIEEDVLDKLQVELQQLCS- 153
R A+ ++++ IVI+DEAH N+ D ++ +++ V + L
Sbjct: 350 SSREALGLNLKSNIVIIDEAHNLADSLINMYDSKLTLSQLENVHRHIERYFVRFRNLLGP 409
Query: 154 SNTAIYQPLYEMTQGLTSWIEQKKNKLEKRDFQHYVSCWTGDKALRELEEANISKQCFPI 213
+N Q L + Q + + ++D SC ++A E ++ +
Sbjct: 410 ANRRYIQTLMVLIQAFLRVL------VNEKDGNLMDSCRDTEQASEERRASDFTMAINDF 463
Query: 214 LLECATKAIKVATDLETDQP-----RLSGMS--VITLEGLFS-SLTYFFSRNGSHMLDYQ 265
+ E I + L + ++SG + TLE + + ++T +GS +Q
Sbjct: 464 VFELNIDNINLVKLLTYIKESNIMHKVSGYGEKMATLEKVSALNITGEHGEDGSCQSAFQ 523
Query: 266 ---LSLQRCVRKDD---------------RRGFGNWMHTFSLWCLNPAVVFRDVADLSLS 307
L V KD ++G G + L+ +F ++ D + +
Sbjct: 524 SLAAMLLSLVNKDSDGRMIISRSSSTSSRKQGQGYIKYVM----LSAEKIFSEIVDEAHA 579
Query: 308 VILTSGTLSPMPSFSSEL-------GVQFETSLEAPHVIDVDSQVWPAIISTGPGNYPLN 360
V+L GTL P+ L + F H++ +S + P +S GP +
Sbjct: 580 VVLVGGTLQPIEETRERLFPWLPPNKLHF---FSCGHIVPPES-ILPIAVSCGPTGRSFD 635
Query: 361 ASYKTADAYEFQDAVGRSLEEIFKIVPGGCLVFFPSYKLMEKLCNRWSETGQWSRLHTEK 420
SY + + + +G L + +VP G +VFFPS+ ++ W +G R+ K
Sbjct: 636 FSYSSRSSADMMQELGLLLCNLVTVVPQGIVVFFPSFDYESRVYENWESSGILERITKRK 695
Query: 421 SLFVEPRGGSQDDFELVLKGYYDSIHHGKRPALGRKRRIKKIDLNHFYTVDSP-QDSKKG 479
+F EPR D E VLK Y D+I+ P+ +V+S +
Sbjct: 696 RVFREPRNNM--DVESVLKEYKDTIY---TPS----------------SVNSEVNQASHT 734
Query: 480 GAALLGVCRGKVSEGIDFSDENARVVIIVGIPFPNINDVQVALKKKYNDTFKSSKNLLS- 538
GA LL V K+SEGI+ SD R +I+VG+P+ + +D+++ + K+ D F++SK L +
Sbjct: 735 GAVLLAVVGAKLSEGINLSDGMGRCIIMVGLPYASPSDIELLERIKHIDGFRNSKFLENP 794
Query: 539 --------------------------GSQWYCHQAFRALNQAAGRCIRHSLDYGAIILLD 572
G ++Y + +A+NQ+ GR IRH DY AI+L+D
Sbjct: 795 GFSASYDVYGGDIQGGFDILRSCSHRGKEYYENLCMKAVNQSIGRAIRHINDYAAILLVD 854
Query: 573 ERF 575
R+
Sbjct: 855 TRY 857
>Medtr2g084735.1 | DNA repair helicase (rad3) | HC |
chr2:35933773-35944460 | 20130731
Length = 845
Score = 147 bits (370), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 154/652 (23%), Positives = 268/652 (41%), Gaps = 120/652 (18%)
Query: 4 LAARKHYCTNKNILGKEN---LDEECKLL----LKDQAMGCP-----EFKNAHKVKGHPS 51
L++RK+ C N +L EN +D C+ L ++ A P EF ++ G +
Sbjct: 195 LSSRKNLCVNNKVLAAENRDSVDAGCRKLTASWVRALAAENPDVPSCEFFEQYERAGSAA 254
Query: 52 LQKGGSNEVHDIEDLVKVGQVVKGCSYYAARSMSDDAQLVFCPYSYIINPIIRGAMDVDI 111
+ G V+ ++DL G+ C Y+ AR M A +V Y Y+++P + + ++
Sbjct: 255 VLPPG---VYTLQDLRTFGKEKGWCPYFLARHMVQFANVVVYSYQYLLDPKVAAIISKEM 311
Query: 112 -RGAIVILDEAHNIEDITRDAGSVDIEEDVLD-------KLQVELQQLCSSNTAIYQPLY 163
+ ++V+ DEAHNI+++ +A SV + +D +++ E+ + +++ + Y
Sbjct: 312 QKESVVVFDEAHNIDNVCIEALSVSVRRQTVDGARRNINRMRQEIDKFKATDAGRLRAEY 371
Query: 164 -EMTQGLTSWIEQKKNKLEKRDFQHYVSCWTGDKALRELEEANISKQCFPILLECATKAI 222
+ +GL + L D W + AL + +I K+ P + A I
Sbjct: 372 NRLVEGLAL-----RGDLPAAD------GWLANPALPD----DILKEAVPGNIRKAEHFI 416
Query: 223 KV-------------ATDLETDQPRLSGMSVITLEGL-FSSLTYFFSRNGSHML------ 262
+V ++E + P S++ G+ +L + + R S M+
Sbjct: 417 QVLRRLVQYLEGRLETENVEKENPVSFVFSILNHAGIDQKTLKFCYDRLHSLMMTLEITD 476
Query: 263 -DYQLSLQRC-----VRKDDRRGFGNWMHTF------------SLWCLNPAVVFRDVADL 304
D L +Q + RGF + F L C + ++ + V +
Sbjct: 477 TDEFLHVQTICDFATLVGTYARGFSIIIEPFDERMPHIPDPVLQLCCHDASLAIKPVFER 536
Query: 305 SLSVILTSGTLSPMPSFSSELGVQFETSLEAPHVIDVDSQVWPAIISTGPGNYPLNASYK 364
SV++TSGTLSP+ + L S + D + P +++ G P++ +
Sbjct: 537 FQSVVITSGTLSPIDLYPRLLNFNPVVSRSFTMSLTRDC-ICPMVLTRGSDQLPVSTKFD 595
Query: 365 TADAYEFQDAVGRSLEEIFKIVPGGCLVFFPSYKLMEKLCNRWSETGQWSRLHTEKSLFV 424
GR L E+ +VP G + FF SY M+ + N W+E G + K +F+
Sbjct: 596 MRSDLGVVRNYGRLLLEMASVVPDGIVCFFVSYSYMDGIVNSWNENGILKEIMQHKLVFI 655
Query: 425 EPRGGSQDDFE--LVLKGYYDSIHHGKRPALGRKRRIKKIDLNHFYTVDSPQDSKKGGAA 482
E +QD E L L Y + G+ GA
Sbjct: 656 E----TQDVVETTLALDNYRKACDCGR------------------------------GAI 681
Query: 483 LLGVCRGKVSEGIDFSDENARVVIIVGIPFP-NINDVQVALKKKYNDTFKSSKNLLSGSQ 541
V RGKV+EGIDF R+VI+ G+PF ++ + +A + +TF+ +
Sbjct: 682 FFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRETFQ-----IKEGD 736
Query: 542 WYCHQAFRALNQAAGRCIRHSLDYGAIILLDERFREERNRALISKWLRRPLR 593
+ A R Q GR IR DYG +I D+R+ R+ + W+ LR
Sbjct: 737 FLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLR 788
>Medtr2g084735.2 | DNA repair helicase (rad3) | HC |
chr2:35935669-35944962 | 20130731
Length = 759
Score = 147 bits (370), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 154/652 (23%), Positives = 268/652 (41%), Gaps = 120/652 (18%)
Query: 4 LAARKHYCTNKNILGKEN---LDEECKLL----LKDQAMGCP-----EFKNAHKVKGHPS 51
L++RK+ C N +L EN +D C+ L ++ A P EF ++ G +
Sbjct: 109 LSSRKNLCVNNKVLAAENRDSVDAGCRKLTASWVRALAAENPDVPSCEFFEQYERAGSAA 168
Query: 52 LQKGGSNEVHDIEDLVKVGQVVKGCSYYAARSMSDDAQLVFCPYSYIINPIIRGAMDVDI 111
+ G V+ ++DL G+ C Y+ AR M A +V Y Y+++P + + ++
Sbjct: 169 VLPPG---VYTLQDLRTFGKEKGWCPYFLARHMVQFANVVVYSYQYLLDPKVAAIISKEM 225
Query: 112 -RGAIVILDEAHNIEDITRDAGSVDIEEDVLD-------KLQVELQQLCSSNTAIYQPLY 163
+ ++V+ DEAHNI+++ +A SV + +D +++ E+ + +++ + Y
Sbjct: 226 QKESVVVFDEAHNIDNVCIEALSVSVRRQTVDGARRNINRMRQEIDKFKATDAGRLRAEY 285
Query: 164 -EMTQGLTSWIEQKKNKLEKRDFQHYVSCWTGDKALRELEEANISKQCFPILLECATKAI 222
+ +GL + L D W + AL + +I K+ P + A I
Sbjct: 286 NRLVEGLAL-----RGDLPAAD------GWLANPALPD----DILKEAVPGNIRKAEHFI 330
Query: 223 KV-------------ATDLETDQPRLSGMSVITLEGL-FSSLTYFFSRNGSHML------ 262
+V ++E + P S++ G+ +L + + R S M+
Sbjct: 331 QVLRRLVQYLEGRLETENVEKENPVSFVFSILNHAGIDQKTLKFCYDRLHSLMMTLEITD 390
Query: 263 -DYQLSLQRC-----VRKDDRRGFGNWMHTF------------SLWCLNPAVVFRDVADL 304
D L +Q + RGF + F L C + ++ + V +
Sbjct: 391 TDEFLHVQTICDFATLVGTYARGFSIIIEPFDERMPHIPDPVLQLCCHDASLAIKPVFER 450
Query: 305 SLSVILTSGTLSPMPSFSSELGVQFETSLEAPHVIDVDSQVWPAIISTGPGNYPLNASYK 364
SV++TSGTLSP+ + L S + D + P +++ G P++ +
Sbjct: 451 FQSVVITSGTLSPIDLYPRLLNFNPVVSRSFTMSLTRDC-ICPMVLTRGSDQLPVSTKFD 509
Query: 365 TADAYEFQDAVGRSLEEIFKIVPGGCLVFFPSYKLMEKLCNRWSETGQWSRLHTEKSLFV 424
GR L E+ +VP G + FF SY M+ + N W+E G + K +F+
Sbjct: 510 MRSDLGVVRNYGRLLLEMASVVPDGIVCFFVSYSYMDGIVNSWNENGILKEIMQHKLVFI 569
Query: 425 EPRGGSQDDFE--LVLKGYYDSIHHGKRPALGRKRRIKKIDLNHFYTVDSPQDSKKGGAA 482
E +QD E L L Y + G+ GA
Sbjct: 570 E----TQDVVETTLALDNYRKACDCGR------------------------------GAI 595
Query: 483 LLGVCRGKVSEGIDFSDENARVVIIVGIPFP-NINDVQVALKKKYNDTFKSSKNLLSGSQ 541
V RGKV+EGIDF R+VI+ G+PF ++ + +A + +TF+ +
Sbjct: 596 FFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRETFQ-----IKEGD 650
Query: 542 WYCHQAFRALNQAAGRCIRHSLDYGAIILLDERFREERNRALISKWLRRPLR 593
+ A R Q GR IR DYG +I D+R+ R+ + W+ LR
Sbjct: 651 FLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLR 702