Miyakogusa Predicted Gene

Lj5g3v0279130.2
Show Alignment: 
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0279130.2 Non Characterized Hit- tr|B9R8Q0|B9R8Q0_RICCO
Brca1 interacting protein helicase 1 brip1, putative
O,57.27,0,seg,NULL; Helicase_C_2,ATP-dependent helicase, C-terminal;
DEAD_2,DEAD2; P-loop containing nucleosid,CUFF.52700.2
         (1083 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g026490.1 | fanconi anemia group J-like protein | HC | chr...  1680   0.0  
Medtr2g102150.3 | regulator of telomere elongation helicase-like...   295   2e-79
Medtr2g102150.2 | regulator of telomere elongation helicase-like...   295   2e-79
Medtr2g102150.1 | regulator of telomere elongation helicase-like...   295   2e-79
Medtr0147s0060.1 | rad3-related DNA helicase family protein | HC...   162   1e-39
Medtr2g084735.1 | DNA repair helicase (rad3) | HC | chr2:3593377...   147   8e-35
Medtr2g084735.2 | DNA repair helicase (rad3) | HC | chr2:3593566...   147   8e-35

>Medtr1g026490.1 | fanconi anemia group J-like protein | HC |
            chr1:8631572-8617169 | 20130731
          Length = 1224

 Score = 1680 bits (4350), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 825/1091 (75%), Positives = 913/1091 (83%), Gaps = 27/1091 (2%)

Query: 1    MAVLAARKHYCTNKNILGKENLDEECKLLLKDQAMGCPEFKNAHKVKGHPSLQKGGSNEV 60
            MA+LA+RKHYCTNKNI G+EN+DEECK LLKD+ +GCPEFK+  KVK HPSLQKGG NEV
Sbjct: 149  MALLASRKHYCTNKNIRGRENIDEECKQLLKDKVIGCPEFKSVQKVKAHPSLQKGGCNEV 208

Query: 61   HDIEDLVKVGQVVKGCSYYAARSMSDDAQLVFCPYSYIINPIIRGAMDVDIRGAIVILDE 120
            HDIEDLVKVGQ VKGCSYYAARSMS+DAQLVFCPY+YIINP+IRGAM+VDI+GAIVI DE
Sbjct: 209  HDIEDLVKVGQSVKGCSYYAARSMSNDAQLVFCPYNYIINPVIRGAMEVDIQGAIVIFDE 268

Query: 121  AHNIEDITRDAGSVDIEEDVLDKLQVELQQLCSSNTAIYQPLYEMTQGLTSWIEQKKNKL 180
            AHNIEDI+RDAGSVDIEED LDKLQ+EL+QLC S+ AIY PLYEMTQGLTSW+E KK  L
Sbjct: 269  AHNIEDISRDAGSVDIEEDTLDKLQMELEQLCHSDIAIYLPLYEMTQGLTSWMEHKKTTL 328

Query: 181  EKRDFQHYVSCWTGDKALRELEEANISKQCFPILLECATKAIKVATDLETDQPRLSGMSV 240
            EKRDFQHYVSCWTGDKAL+ELEEANISKQCFPILLECATKAIKV TDLE D+P LSGMSV
Sbjct: 329  EKRDFQHYVSCWTGDKALQELEEANISKQCFPILLECATKAIKVYTDLEEDEPHLSGMSV 388

Query: 241  ITLEGLFSSLTYFFSRNGSHMLDYQLSLQRCVRKDDRRGFGNWMHTFSLWCLNPAVVFRD 300
            ITLEGLFSSL+YFFS+NGSHMLDYQL+LQR VRK DRR  GNW HT SLWCLNPA VFR+
Sbjct: 389  ITLEGLFSSLSYFFSKNGSHMLDYQLALQRTVRKHDRRASGNWTHTLSLWCLNPAAVFRE 448

Query: 301  VADLSLSVILTSGTLSPMPSFSSELGVQFETSLEAPHVIDVDSQVWPAIISTGPGNYPLN 360
            VADLSLSVILTSGTLSPM SFSSELGV+FET+LEAPHVID DSQVWPAIISTGPGNYPLN
Sbjct: 449  VADLSLSVILTSGTLSPMMSFSSELGVKFETNLEAPHVIDTDSQVWPAIISTGPGNYPLN 508

Query: 361  ASYKTADAYEFQDAVGRSLEEIFKIVPGGCLVFFPSYKLMEKLCNRWSETGQWSRLHTEK 420
            ASYKTAD Y FQDAVGRSLEEIFKIV GGCLVFFPSYKLMEKLC RWSETGQWSRL  EK
Sbjct: 509  ASYKTADVYAFQDAVGRSLEEIFKIVSGGCLVFFPSYKLMEKLCTRWSETGQWSRLKAEK 568

Query: 421  SLFVEPRGGSQDDFELVLKGYYDSIHHGKRPALGRKRRIKKIDLNHFYTVDSPQDSKKGG 480
             LFVE +GGSQDDFEL LKGYYDSIHH K+PA GRKRRIKK DLNHF+ VDS QD+KKGG
Sbjct: 569  PLFVESKGGSQDDFELTLKGYYDSIHHDKKPASGRKRRIKKTDLNHFHAVDSIQDTKKGG 628

Query: 481  AALLGVCRGKVSEGIDFSDENARVVIIVGIPFPNINDVQVALKKKYNDTFKSSKNLLSGS 540
            AALLGVCRGKVSEGIDFSD+NAR VIIVGIPFPN+ D+QVALKKKYNDTFKSSK LL G+
Sbjct: 629  AALLGVCRGKVSEGIDFSDDNARAVIIVGIPFPNMYDIQVALKKKYNDTFKSSKQLLGGN 688

Query: 541  QWYCHQAFRALNQAAGRCIRHSLDYGAIILLDERFREERNRALISKWLRRPLRVYDSFNL 600
            +WYCHQAFRALNQAAGRCIRH LDYGAIILLDERFREERN+A ISKWLR+PLRVYDSF L
Sbjct: 689  EWYCHQAFRALNQAAGRCIRHRLDYGAIILLDERFREERNKAFISKWLRKPLRVYDSFEL 748

Query: 601  SLEGLKSFFEDAKERFSMNTVHISQNL-VFDSDGVQNKEQNTRL--KKNQKLNKSVNGRE 657
            SLE LKSFFE+AKER+ ++TVH + NL + D DGVQNK+ N     KKNQKLNKS NG E
Sbjct: 749  SLEKLKSFFENAKERYGLDTVHATTNLNLNDDDGVQNKDGNMWFPKKKNQKLNKSRNGAE 808

Query: 658  KDTSMIEDNISIPT--LSSHDLAESQLFAQRTSNTYNFEDHINPQCCNLTERLTEKLPVS 715
            K+TS+IED ISIPT  LSSH+L ESQ  A R SNTY+F+DHIN QCCNLTER TE   V+
Sbjct: 809  KETSVIEDKISIPTPSLSSHNLGESQPSAPRNSNTYSFKDHINLQCCNLTERFTEASSVT 868

Query: 716  ITHEETSVVKETPCIDVGHDAGSPDYS-DAYSNCTIIET-SAQFPPDHLSSHQMXXXXXX 773
             TH+ET  VKE+P   +   AGS  YS D  S+CTIIE  S+ FP    +  ++      
Sbjct: 869  FTHDETPTVKESPSSHIASGAGSAYYSKDDNSDCTIIEDHSSSFPVSSTTGSKISN---- 924

Query: 774  XXXXXXXXXITVTPEKNIATTNIPEMDSSLNLSVNSHNQKRRK----PFINLIEEENYGA 829
                      TVTPEK++   NIPE  SSLN SVNSHNQKRRK    P+I+LIEEEN+ A
Sbjct: 925  ----------TVTPEKSVTANNIPE--SSLNSSVNSHNQKRRKPTVVPYIDLIEEENHEA 972

Query: 830  PCATSLTWYSKSSVAVTEATHGTKPGLERNLKSHSPQIPTSNLPGTCSLTAPLLDKRLQI 889
               ++  WY+KSSV V EATH T+  L R     SPQ+PTSNLPG+CSLT PLLDKRL +
Sbjct: 973  SSVSTPKWYTKSSVEVREATHETECSLGRISNLQSPQLPTSNLPGSCSLTIPLLDKRLLL 1032

Query: 890  FCSLCKNPLGRPENDLFLTCSLISSSKVYLRSLLKQKLKTYTTDTSDSLPVILTDSSCVD 949
            FCSLCKNPLGR EN L LTCSLISSS V+LR LLK++L TYT D   S+PVI+TDSS VD
Sbjct: 1033 FCSLCKNPLGRHENHLSLTCSLISSSIVHLRFLLKKRLATYTADAEKSVPVIVTDSSFVD 1092

Query: 950  QRILNRIPKSAPEQGIWCLEDGCVFSTVFCPFCSNRNNLLGVQVMATNSSNVQLLEQILF 1009
            QR+ NR+PKS  E+GIWC EDGCVFST+FCPFCSN NNLLGVQ+MATNSSN +LL++ILF
Sbjct: 1093 QRVCNRVPKSTQEEGIWCPEDGCVFSTIFCPFCSNTNNLLGVQIMATNSSNAKLLDKILF 1152

Query: 1010 YFDSLVVKNHEETGKGASEEEDLLPVIDSGTDEVAVLNSIDRYSYLPQPAKSEVWKIRKS 1069
            +FDSL VK  EE GK ASEE D  P+ DSG D VA LNS ++YSY+PQP KSEVWK RKS
Sbjct: 1153 FFDSLEVKYQEEAGKSASEEVDFSPITDSGMDGVAALNSFEKYSYVPQPGKSEVWKSRKS 1212

Query: 1070 KPRLRSSPYAE 1080
            KP+LR SPYAE
Sbjct: 1213 KPKLRGSPYAE 1223


>Medtr2g102150.3 | regulator of telomere elongation helicase-like
           protein | HC | chr2:43966024-43954610 | 20130731
          Length = 1004

 Score =  295 bits (755), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 201/646 (31%), Positives = 300/646 (46%), Gaps = 75/646 (11%)

Query: 1   MAVLAARKHYCTNKNI--LGKENLDEECKLLLKDQAMG---CPEFKNA-HKVKGHPSLQK 54
           M VL +R+ +C +  +  L        C+   + +A     C  F      +K +P+L  
Sbjct: 123 MTVLGSREQFCIHDEVKLLRGRTQTNACRFACRRRAKQKRRCNHFNQVLDYLKQNPNL-- 180

Query: 55  GGSNEVHDIEDLVKVGQVVKGCSYYAARSMSDDAQLVFCPYSYIINPIIRGAMDVDIRGA 114
               E  DIEDLV +G+    C Y+ A+ +     ++F PY+Y+I+   R A+ +    +
Sbjct: 181 --GEEPVDIEDLVNIGKTSGPCPYHLAKELHKAVDIIFAPYNYLIDRGKRKALQISWSNS 238

Query: 115 IVILDEAHNIEDITRDAGSVDIEEDVLDKLQVELQQLC-------------SSNTAIYQP 161
           I+I DEAHN+E I  DA S D+   +L     E Q                S N   +  
Sbjct: 239 ILIFDEAHNLESICADAASFDLPSWLLTACISEAQSCVDLLIERRNKSNDKSQNPDDFAI 298

Query: 162 LYEMTQGLTSWIEQKKNKLEKRDFQHYVSCWTGDKALRELEEANISKQCFPILLECATKA 221
           L  +   L   I +   + ++  F        G      L + NI+ +  P L    T A
Sbjct: 299 LKALLLKLEKRIAEVHIESKELGFTK-----PGPYIFELLADLNITHKTAPKLKSIVTDA 353

Query: 222 IKVATDLETDQPRLSGMSVITLEGLFSSLTYFFSRNG--SHMLDYQLSLQRCVRKDDRRG 279
              +T LE D    S  ++  LE +   L   F R+G  SH   Y++ ++          
Sbjct: 354 ---STLLEEDSQEKSTSNICRLETMKDILDIIF-RDGRTSHAKYYRVHVKEAEAWAANGS 409

Query: 280 FGNWMHTFSLWCLNPAVVFRDVA-DLSLSVILTSGTLSPMPSFSSELGVQFETSLEAPHV 338
            G    T S WC NP +   + A D   S+ILTSGTLSP+ SF+ EL + F   LE PHV
Sbjct: 410 LGKVSRTLSWWCFNPGIALEEFAKDGVRSIILTSGTLSPLDSFAEELKLDFPIRLENPHV 469

Query: 339 IDVDSQVWPAIISTGPGNYPLNASYKTADAYEFQDAVGRSLEEIFKIVPGGCLVFFPSYK 398
           I  + Q+W  ++  GP     N+SY+T D  E++  +G ++  + +IVP G LVFFPSY 
Sbjct: 470 IGPN-QIWAGVVPVGPLGRTFNSSYRTRDTMEYKQELGNAIVNLTRIVPDGLLVFFPSYY 528

Query: 399 LMEKLCNRWSETGQ-----WSRLHTEKSLFVEPRGGSQDDFELVLKGYYDSIHHGKRPAL 453
           L+E+    W          W R+   K   +EPR  S   F   +K Y   ++       
Sbjct: 529 LLEQSIGCWKSLSNDGSSIWERICKNKKPVIEPRESSM--FTSSIKDYLTKLN------- 579

Query: 454 GRKRRIKKIDLNHFYTVDSPQDSKKGGAALLGVCRGKVSEGIDFSDENARVVIIVGIPFP 513
                                D+   GA    VCRGKVSEG+DF+D   R V++ G+P+ 
Sbjct: 580 ---------------------DTTASGAVFFAVCRGKVSEGLDFADHAGRAVVVTGLPYA 618

Query: 514 NINDVQVALKKKYNDTFKSSKN----LLSGSQWYCHQAFRALNQAAGRCIRHSLDYGAII 569
            + D +V LK++Y D    ++     +L+G +WY  QA RA+NQA GR IRH  DYGAII
Sbjct: 619 TVTDPKVRLKREYLDQQSGAQGGSFKVLTGDEWYNQQASRAVNQAVGRVIRHRHDYGAII 678

Query: 570 LLDERFREERNRALISKWLRRPLRVYDSFNLSLEGLKSFFEDAKER 615
             DERF +   ++ +SKW++  ++ Y  F   +  L  FF D + R
Sbjct: 679 FCDERFTQPHRQSQVSKWIQPHIKCYSRFGEVVFTLTRFFRDGRTR 724


>Medtr2g102150.2 | regulator of telomere elongation helicase-like
           protein | HC | chr2:43966024-43954610 | 20130731
          Length = 1004

 Score =  295 bits (755), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 201/646 (31%), Positives = 300/646 (46%), Gaps = 75/646 (11%)

Query: 1   MAVLAARKHYCTNKNI--LGKENLDEECKLLLKDQAMG---CPEFKNA-HKVKGHPSLQK 54
           M VL +R+ +C +  +  L        C+   + +A     C  F      +K +P+L  
Sbjct: 123 MTVLGSREQFCIHDEVKLLRGRTQTNACRFACRRRAKQKRRCNHFNQVLDYLKQNPNL-- 180

Query: 55  GGSNEVHDIEDLVKVGQVVKGCSYYAARSMSDDAQLVFCPYSYIINPIIRGAMDVDIRGA 114
               E  DIEDLV +G+    C Y+ A+ +     ++F PY+Y+I+   R A+ +    +
Sbjct: 181 --GEEPVDIEDLVNIGKTSGPCPYHLAKELHKAVDIIFAPYNYLIDRGKRKALQISWSNS 238

Query: 115 IVILDEAHNIEDITRDAGSVDIEEDVLDKLQVELQQLC-------------SSNTAIYQP 161
           I+I DEAHN+E I  DA S D+   +L     E Q                S N   +  
Sbjct: 239 ILIFDEAHNLESICADAASFDLPSWLLTACISEAQSCVDLLIERRNKSNDKSQNPDDFAI 298

Query: 162 LYEMTQGLTSWIEQKKNKLEKRDFQHYVSCWTGDKALRELEEANISKQCFPILLECATKA 221
           L  +   L   I +   + ++  F        G      L + NI+ +  P L    T A
Sbjct: 299 LKALLLKLEKRIAEVHIESKELGFTK-----PGPYIFELLADLNITHKTAPKLKSIVTDA 353

Query: 222 IKVATDLETDQPRLSGMSVITLEGLFSSLTYFFSRNG--SHMLDYQLSLQRCVRKDDRRG 279
              +T LE D    S  ++  LE +   L   F R+G  SH   Y++ ++          
Sbjct: 354 ---STLLEEDSQEKSTSNICRLETMKDILDIIF-RDGRTSHAKYYRVHVKEAEAWAANGS 409

Query: 280 FGNWMHTFSLWCLNPAVVFRDVA-DLSLSVILTSGTLSPMPSFSSELGVQFETSLEAPHV 338
            G    T S WC NP +   + A D   S+ILTSGTLSP+ SF+ EL + F   LE PHV
Sbjct: 410 LGKVSRTLSWWCFNPGIALEEFAKDGVRSIILTSGTLSPLDSFAEELKLDFPIRLENPHV 469

Query: 339 IDVDSQVWPAIISTGPGNYPLNASYKTADAYEFQDAVGRSLEEIFKIVPGGCLVFFPSYK 398
           I  + Q+W  ++  GP     N+SY+T D  E++  +G ++  + +IVP G LVFFPSY 
Sbjct: 470 IGPN-QIWAGVVPVGPLGRTFNSSYRTRDTMEYKQELGNAIVNLTRIVPDGLLVFFPSYY 528

Query: 399 LMEKLCNRWSETGQ-----WSRLHTEKSLFVEPRGGSQDDFELVLKGYYDSIHHGKRPAL 453
           L+E+    W          W R+   K   +EPR  S   F   +K Y   ++       
Sbjct: 529 LLEQSIGCWKSLSNDGSSIWERICKNKKPVIEPRESSM--FTSSIKDYLTKLN------- 579

Query: 454 GRKRRIKKIDLNHFYTVDSPQDSKKGGAALLGVCRGKVSEGIDFSDENARVVIIVGIPFP 513
                                D+   GA    VCRGKVSEG+DF+D   R V++ G+P+ 
Sbjct: 580 ---------------------DTTASGAVFFAVCRGKVSEGLDFADHAGRAVVVTGLPYA 618

Query: 514 NINDVQVALKKKYNDTFKSSKN----LLSGSQWYCHQAFRALNQAAGRCIRHSLDYGAII 569
            + D +V LK++Y D    ++     +L+G +WY  QA RA+NQA GR IRH  DYGAII
Sbjct: 619 TVTDPKVRLKREYLDQQSGAQGGSFKVLTGDEWYNQQASRAVNQAVGRVIRHRHDYGAII 678

Query: 570 LLDERFREERNRALISKWLRRPLRVYDSFNLSLEGLKSFFEDAKER 615
             DERF +   ++ +SKW++  ++ Y  F   +  L  FF D + R
Sbjct: 679 FCDERFTQPHRQSQVSKWIQPHIKCYSRFGEVVFTLTRFFRDGRTR 724


>Medtr2g102150.1 | regulator of telomere elongation helicase-like
           protein | HC | chr2:43966024-43954610 | 20130731
          Length = 1004

 Score =  295 bits (755), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 201/646 (31%), Positives = 300/646 (46%), Gaps = 75/646 (11%)

Query: 1   MAVLAARKHYCTNKNI--LGKENLDEECKLLLKDQAMG---CPEFKNA-HKVKGHPSLQK 54
           M VL +R+ +C +  +  L        C+   + +A     C  F      +K +P+L  
Sbjct: 123 MTVLGSREQFCIHDEVKLLRGRTQTNACRFACRRRAKQKRRCNHFNQVLDYLKQNPNL-- 180

Query: 55  GGSNEVHDIEDLVKVGQVVKGCSYYAARSMSDDAQLVFCPYSYIINPIIRGAMDVDIRGA 114
               E  DIEDLV +G+    C Y+ A+ +     ++F PY+Y+I+   R A+ +    +
Sbjct: 181 --GEEPVDIEDLVNIGKTSGPCPYHLAKELHKAVDIIFAPYNYLIDRGKRKALQISWSNS 238

Query: 115 IVILDEAHNIEDITRDAGSVDIEEDVLDKLQVELQQLC-------------SSNTAIYQP 161
           I+I DEAHN+E I  DA S D+   +L     E Q                S N   +  
Sbjct: 239 ILIFDEAHNLESICADAASFDLPSWLLTACISEAQSCVDLLIERRNKSNDKSQNPDDFAI 298

Query: 162 LYEMTQGLTSWIEQKKNKLEKRDFQHYVSCWTGDKALRELEEANISKQCFPILLECATKA 221
           L  +   L   I +   + ++  F        G      L + NI+ +  P L    T A
Sbjct: 299 LKALLLKLEKRIAEVHIESKELGFTK-----PGPYIFELLADLNITHKTAPKLKSIVTDA 353

Query: 222 IKVATDLETDQPRLSGMSVITLEGLFSSLTYFFSRNG--SHMLDYQLSLQRCVRKDDRRG 279
              +T LE D    S  ++  LE +   L   F R+G  SH   Y++ ++          
Sbjct: 354 ---STLLEEDSQEKSTSNICRLETMKDILDIIF-RDGRTSHAKYYRVHVKEAEAWAANGS 409

Query: 280 FGNWMHTFSLWCLNPAVVFRDVA-DLSLSVILTSGTLSPMPSFSSELGVQFETSLEAPHV 338
            G    T S WC NP +   + A D   S+ILTSGTLSP+ SF+ EL + F   LE PHV
Sbjct: 410 LGKVSRTLSWWCFNPGIALEEFAKDGVRSIILTSGTLSPLDSFAEELKLDFPIRLENPHV 469

Query: 339 IDVDSQVWPAIISTGPGNYPLNASYKTADAYEFQDAVGRSLEEIFKIVPGGCLVFFPSYK 398
           I  + Q+W  ++  GP     N+SY+T D  E++  +G ++  + +IVP G LVFFPSY 
Sbjct: 470 IGPN-QIWAGVVPVGPLGRTFNSSYRTRDTMEYKQELGNAIVNLTRIVPDGLLVFFPSYY 528

Query: 399 LMEKLCNRWSETGQ-----WSRLHTEKSLFVEPRGGSQDDFELVLKGYYDSIHHGKRPAL 453
           L+E+    W          W R+   K   +EPR  S   F   +K Y   ++       
Sbjct: 529 LLEQSIGCWKSLSNDGSSIWERICKNKKPVIEPRESSM--FTSSIKDYLTKLN------- 579

Query: 454 GRKRRIKKIDLNHFYTVDSPQDSKKGGAALLGVCRGKVSEGIDFSDENARVVIIVGIPFP 513
                                D+   GA    VCRGKVSEG+DF+D   R V++ G+P+ 
Sbjct: 580 ---------------------DTTASGAVFFAVCRGKVSEGLDFADHAGRAVVVTGLPYA 618

Query: 514 NINDVQVALKKKYNDTFKSSKN----LLSGSQWYCHQAFRALNQAAGRCIRHSLDYGAII 569
            + D +V LK++Y D    ++     +L+G +WY  QA RA+NQA GR IRH  DYGAII
Sbjct: 619 TVTDPKVRLKREYLDQQSGAQGGSFKVLTGDEWYNQQASRAVNQAVGRVIRHRHDYGAII 678

Query: 570 LLDERFREERNRALISKWLRRPLRVYDSFNLSLEGLKSFFEDAKER 615
             DERF +   ++ +SKW++  ++ Y  F   +  L  FF D + R
Sbjct: 679 FCDERFTQPHRQSQVSKWIQPHIKCYSRFGEVVFTLTRFFRDGRTR 724


>Medtr0147s0060.1 | rad3-related DNA helicase family protein | HC |
           scaffold0147:21230-15819 | 20130731
          Length = 907

 Score =  162 bits (411), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 167/663 (25%), Positives = 282/663 (42%), Gaps = 126/663 (19%)

Query: 4   LAARKHYCTNKNILGKEN---LDEECKLLLKDQAMGCPEFKN------AHKVK---GHPS 51
           L +RK+ C N+ +L   N   ++E C  L K +     + KN      A + K   G P 
Sbjct: 230 LGSRKNLCINQEVLALGNSSRINERCLELQKKKKNDATKVKNLKAGTGARRTKASSGCPM 289

Query: 52  LQKGG-----SNEVH-----DIEDLVKVGQVVKGCSYYAARSMSDDAQLVFCPYSYIINP 101
           L+K        NEV      DIEDL  +G+ +  C YY +RSM     LV  PY  +++ 
Sbjct: 290 LRKRRLQHEFRNEVSQQGPLDIEDLANLGRTMGTCPYYGSRSMVRRVDLVVLPYQSLLSK 349

Query: 102 IIRGAMDVDIRGAIVILDEAH-------NIEDITRDAGSVDIEEDVLDKLQVELQQLCS- 153
             R A+ ++++  IVI+DEAH       N+ D       ++     +++  V  + L   
Sbjct: 350 SSREALGLNLKSNIVIIDEAHNLADSLINMYDSKLTLSQLENVHRHIERYFVRFRNLLGP 409

Query: 154 SNTAIYQPLYEMTQGLTSWIEQKKNKLEKRDFQHYVSCWTGDKALRELEEANISKQCFPI 213
           +N    Q L  + Q     +      + ++D     SC   ++A  E   ++ +      
Sbjct: 410 ANRRYIQTLMVLIQAFLRVL------VNEKDGNLMDSCRDTEQASEERRASDFTMAINDF 463

Query: 214 LLECATKAIKVATDLETDQP-----RLSGMS--VITLEGLFS-SLTYFFSRNGSHMLDYQ 265
           + E     I +   L   +      ++SG    + TLE + + ++T     +GS    +Q
Sbjct: 464 VFELNIDNINLVKLLTYIKESNIMHKVSGYGEKMATLEKVSALNITGEHGEDGSCQSAFQ 523

Query: 266 ---LSLQRCVRKDD---------------RRGFGNWMHTFSLWCLNPAVVFRDVADLSLS 307
                L   V KD                ++G G   +      L+   +F ++ D + +
Sbjct: 524 SLAAMLLSLVNKDSDGRMIISRSSSTSSRKQGQGYIKYVM----LSAEKIFSEIVDEAHA 579

Query: 308 VILTSGTLSPMPSFSSEL-------GVQFETSLEAPHVIDVDSQVWPAIISTGPGNYPLN 360
           V+L  GTL P+      L        + F       H++  +S + P  +S GP     +
Sbjct: 580 VVLVGGTLQPIEETRERLFPWLPPNKLHF---FSCGHIVPPES-ILPIAVSCGPTGRSFD 635

Query: 361 ASYKTADAYEFQDAVGRSLEEIFKIVPGGCLVFFPSYKLMEKLCNRWSETGQWSRLHTEK 420
            SY +  + +    +G  L  +  +VP G +VFFPS+    ++   W  +G   R+   K
Sbjct: 636 FSYSSRSSADMMQELGLLLCNLVTVVPQGIVVFFPSFDYESRVYENWESSGILERITKRK 695

Query: 421 SLFVEPRGGSQDDFELVLKGYYDSIHHGKRPALGRKRRIKKIDLNHFYTVDSP-QDSKKG 479
            +F EPR     D E VLK Y D+I+    P+                +V+S    +   
Sbjct: 696 RVFREPRNNM--DVESVLKEYKDTIY---TPS----------------SVNSEVNQASHT 734

Query: 480 GAALLGVCRGKVSEGIDFSDENARVVIIVGIPFPNINDVQVALKKKYNDTFKSSKNLLS- 538
           GA LL V   K+SEGI+ SD   R +I+VG+P+ + +D+++  + K+ D F++SK L + 
Sbjct: 735 GAVLLAVVGAKLSEGINLSDGMGRCIIMVGLPYASPSDIELLERIKHIDGFRNSKFLENP 794

Query: 539 --------------------------GSQWYCHQAFRALNQAAGRCIRHSLDYGAIILLD 572
                                     G ++Y +   +A+NQ+ GR IRH  DY AI+L+D
Sbjct: 795 GFSASYDVYGGDIQGGFDILRSCSHRGKEYYENLCMKAVNQSIGRAIRHINDYAAILLVD 854

Query: 573 ERF 575
            R+
Sbjct: 855 TRY 857


>Medtr2g084735.1 | DNA repair helicase (rad3) | HC |
           chr2:35933773-35944460 | 20130731
          Length = 845

 Score =  147 bits (370), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 154/652 (23%), Positives = 268/652 (41%), Gaps = 120/652 (18%)

Query: 4   LAARKHYCTNKNILGKEN---LDEECKLL----LKDQAMGCP-----EFKNAHKVKGHPS 51
           L++RK+ C N  +L  EN   +D  C+ L    ++  A   P     EF   ++  G  +
Sbjct: 195 LSSRKNLCVNNKVLAAENRDSVDAGCRKLTASWVRALAAENPDVPSCEFFEQYERAGSAA 254

Query: 52  LQKGGSNEVHDIEDLVKVGQVVKGCSYYAARSMSDDAQLVFCPYSYIINPIIRGAMDVDI 111
           +   G   V+ ++DL   G+    C Y+ AR M   A +V   Y Y+++P +   +  ++
Sbjct: 255 VLPPG---VYTLQDLRTFGKEKGWCPYFLARHMVQFANVVVYSYQYLLDPKVAAIISKEM 311

Query: 112 -RGAIVILDEAHNIEDITRDAGSVDIEEDVLD-------KLQVELQQLCSSNTAIYQPLY 163
            + ++V+ DEAHNI+++  +A SV +    +D       +++ E+ +  +++    +  Y
Sbjct: 312 QKESVVVFDEAHNIDNVCIEALSVSVRRQTVDGARRNINRMRQEIDKFKATDAGRLRAEY 371

Query: 164 -EMTQGLTSWIEQKKNKLEKRDFQHYVSCWTGDKALRELEEANISKQCFPILLECATKAI 222
             + +GL       +  L   D       W  + AL +    +I K+  P  +  A   I
Sbjct: 372 NRLVEGLAL-----RGDLPAAD------GWLANPALPD----DILKEAVPGNIRKAEHFI 416

Query: 223 KV-------------ATDLETDQPRLSGMSVITLEGL-FSSLTYFFSRNGSHML------ 262
           +V               ++E + P     S++   G+   +L + + R  S M+      
Sbjct: 417 QVLRRLVQYLEGRLETENVEKENPVSFVFSILNHAGIDQKTLKFCYDRLHSLMMTLEITD 476

Query: 263 -DYQLSLQRC-----VRKDDRRGFGNWMHTF------------SLWCLNPAVVFRDVADL 304
            D  L +Q       +     RGF   +  F             L C + ++  + V + 
Sbjct: 477 TDEFLHVQTICDFATLVGTYARGFSIIIEPFDERMPHIPDPVLQLCCHDASLAIKPVFER 536

Query: 305 SLSVILTSGTLSPMPSFSSELGVQFETSLEAPHVIDVDSQVWPAIISTGPGNYPLNASYK 364
             SV++TSGTLSP+  +   L      S      +  D  + P +++ G    P++  + 
Sbjct: 537 FQSVVITSGTLSPIDLYPRLLNFNPVVSRSFTMSLTRDC-ICPMVLTRGSDQLPVSTKFD 595

Query: 365 TADAYEFQDAVGRSLEEIFKIVPGGCLVFFPSYKLMEKLCNRWSETGQWSRLHTEKSLFV 424
                      GR L E+  +VP G + FF SY  M+ + N W+E G    +   K +F+
Sbjct: 596 MRSDLGVVRNYGRLLLEMASVVPDGIVCFFVSYSYMDGIVNSWNENGILKEIMQHKLVFI 655

Query: 425 EPRGGSQDDFE--LVLKGYYDSIHHGKRPALGRKRRIKKIDLNHFYTVDSPQDSKKGGAA 482
           E    +QD  E  L L  Y  +   G+                              GA 
Sbjct: 656 E----TQDVVETTLALDNYRKACDCGR------------------------------GAI 681

Query: 483 LLGVCRGKVSEGIDFSDENARVVIIVGIPFP-NINDVQVALKKKYNDTFKSSKNLLSGSQ 541
              V RGKV+EGIDF     R+VI+ G+PF   ++ + +A  +   +TF+     +    
Sbjct: 682 FFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRETFQ-----IKEGD 736

Query: 542 WYCHQAFRALNQAAGRCIRHSLDYGAIILLDERFREERNRALISKWLRRPLR 593
           +    A R   Q  GR IR   DYG +I  D+R+     R+ +  W+   LR
Sbjct: 737 FLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLR 788


>Medtr2g084735.2 | DNA repair helicase (rad3) | HC |
           chr2:35935669-35944962 | 20130731
          Length = 759

 Score =  147 bits (370), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 154/652 (23%), Positives = 268/652 (41%), Gaps = 120/652 (18%)

Query: 4   LAARKHYCTNKNILGKEN---LDEECKLL----LKDQAMGCP-----EFKNAHKVKGHPS 51
           L++RK+ C N  +L  EN   +D  C+ L    ++  A   P     EF   ++  G  +
Sbjct: 109 LSSRKNLCVNNKVLAAENRDSVDAGCRKLTASWVRALAAENPDVPSCEFFEQYERAGSAA 168

Query: 52  LQKGGSNEVHDIEDLVKVGQVVKGCSYYAARSMSDDAQLVFCPYSYIINPIIRGAMDVDI 111
           +   G   V+ ++DL   G+    C Y+ AR M   A +V   Y Y+++P +   +  ++
Sbjct: 169 VLPPG---VYTLQDLRTFGKEKGWCPYFLARHMVQFANVVVYSYQYLLDPKVAAIISKEM 225

Query: 112 -RGAIVILDEAHNIEDITRDAGSVDIEEDVLD-------KLQVELQQLCSSNTAIYQPLY 163
            + ++V+ DEAHNI+++  +A SV +    +D       +++ E+ +  +++    +  Y
Sbjct: 226 QKESVVVFDEAHNIDNVCIEALSVSVRRQTVDGARRNINRMRQEIDKFKATDAGRLRAEY 285

Query: 164 -EMTQGLTSWIEQKKNKLEKRDFQHYVSCWTGDKALRELEEANISKQCFPILLECATKAI 222
             + +GL       +  L   D       W  + AL +    +I K+  P  +  A   I
Sbjct: 286 NRLVEGLAL-----RGDLPAAD------GWLANPALPD----DILKEAVPGNIRKAEHFI 330

Query: 223 KV-------------ATDLETDQPRLSGMSVITLEGL-FSSLTYFFSRNGSHML------ 262
           +V               ++E + P     S++   G+   +L + + R  S M+      
Sbjct: 331 QVLRRLVQYLEGRLETENVEKENPVSFVFSILNHAGIDQKTLKFCYDRLHSLMMTLEITD 390

Query: 263 -DYQLSLQRC-----VRKDDRRGFGNWMHTF------------SLWCLNPAVVFRDVADL 304
            D  L +Q       +     RGF   +  F             L C + ++  + V + 
Sbjct: 391 TDEFLHVQTICDFATLVGTYARGFSIIIEPFDERMPHIPDPVLQLCCHDASLAIKPVFER 450

Query: 305 SLSVILTSGTLSPMPSFSSELGVQFETSLEAPHVIDVDSQVWPAIISTGPGNYPLNASYK 364
             SV++TSGTLSP+  +   L      S      +  D  + P +++ G    P++  + 
Sbjct: 451 FQSVVITSGTLSPIDLYPRLLNFNPVVSRSFTMSLTRDC-ICPMVLTRGSDQLPVSTKFD 509

Query: 365 TADAYEFQDAVGRSLEEIFKIVPGGCLVFFPSYKLMEKLCNRWSETGQWSRLHTEKSLFV 424
                      GR L E+  +VP G + FF SY  M+ + N W+E G    +   K +F+
Sbjct: 510 MRSDLGVVRNYGRLLLEMASVVPDGIVCFFVSYSYMDGIVNSWNENGILKEIMQHKLVFI 569

Query: 425 EPRGGSQDDFE--LVLKGYYDSIHHGKRPALGRKRRIKKIDLNHFYTVDSPQDSKKGGAA 482
           E    +QD  E  L L  Y  +   G+                              GA 
Sbjct: 570 E----TQDVVETTLALDNYRKACDCGR------------------------------GAI 595

Query: 483 LLGVCRGKVSEGIDFSDENARVVIIVGIPFP-NINDVQVALKKKYNDTFKSSKNLLSGSQ 541
              V RGKV+EGIDF     R+VI+ G+PF   ++ + +A  +   +TF+     +    
Sbjct: 596 FFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRETFQ-----IKEGD 650

Query: 542 WYCHQAFRALNQAAGRCIRHSLDYGAIILLDERFREERNRALISKWLRRPLR 593
           +    A R   Q  GR IR   DYG +I  D+R+     R+ +  W+   LR
Sbjct: 651 FLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLR 702