Miyakogusa Predicted Gene

Lj5g3v0091590.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0091590.1 Non Characterized Hit- tr|D8RPH8|D8RPH8_SELML
Putative uncharacterized protein OS=Selaginella
moelle,32.67,0.000000000003,seg,NULL,gene.g58321.t1.1
         (192 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g036520.1 | transmembrane protein, putative | HC | chr8:13...   253   8e-68

>Medtr8g036520.1 | transmembrane protein, putative | HC |
           chr8:13501286-13499805 | 20130731
          Length = 258

 Score =  253 bits (646), Expect = 8e-68,   Method: Compositional matrix adjust.
 Identities = 131/191 (68%), Positives = 141/191 (73%), Gaps = 3/191 (1%)

Query: 2   NPFVPVAKPRFFXXXXXXXXXXXXXXXXXXQKPNQTENPYPSQNPHFKHQEIEGPTVERD 61
           NPF    KPRFF                  +K     +PYPS+NP+FKHQEIEGPTVERD
Sbjct: 71  NPFAQFTKPRFFSTNDPSSPSSSSDSEKEKEK---DSSPYPSENPNFKHQEIEGPTVERD 127

Query: 62  LSPLANETREVLETTMKNVYGLSRXXXXXXXXXXXXXXWITYVTRSSPITEVSVQSFVAF 121
           LSPLANETREVLE  MKN+YGLSR              WITYVTRSSPITEVSVQSF+AF
Sbjct: 128 LSPLANETREVLERMMKNIYGLSRVVALMGLVQLGVGGWITYVTRSSPITEVSVQSFLAF 187

Query: 122 ALPFSLAFMLRQCLKPMHFLKKMEEQGRLQILTLTMQVAKQLNAFFVRVRGVSFLCIVGM 181
           A PF LAFMLRQ LKPMHF KKMEEQGRLQILTLT+QVAKQLN  FVRVRGVSFLC++G+
Sbjct: 188 AFPFCLAFMLRQSLKPMHFFKKMEEQGRLQILTLTLQVAKQLNVLFVRVRGVSFLCMIGL 247

Query: 182 SAGLVFAVFSR 192
           SAGLVFAV SR
Sbjct: 248 SAGLVFAVVSR 258