Miyakogusa Predicted Gene

Lj4g3v3096070.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v3096070.1 Non Characterized Hit- tr|I3SN88|I3SN88_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,99,0,ADX,Adrenodoxin, iron-sulphur binding site;
ADRENODOXIN,Adrenodoxin; no description,Beta-grasp domai,CUFF.52252.1
         (201 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g131820.1 | 2Fe-2S iron-sulfur cluster-binding domain prot...   319   9e-88
Medtr4g131820.2 | 2Fe-2S iron-sulfur cluster-binding domain prot...   292   1e-79
Medtr1g112970.1 | 2Fe-2S iron-sulfur cluster-binding domain prot...   218   3e-57
Medtr4g131820.3 | 2Fe-2S iron-sulfur cluster-binding domain prot...   196   1e-50
Medtr4g124760.1 | ferredoxin, putative | LC | chr4:51713983-5171...    55   5e-08

>Medtr4g131820.1 | 2Fe-2S iron-sulfur cluster-binding domain protein
           | HC | chr4:55005693-55010362 | 20130731
          Length = 204

 Score =  319 bits (818), Expect = 9e-88,   Method: Compositional matrix adjust.
 Identities = 157/204 (76%), Positives = 176/204 (86%), Gaps = 6/204 (2%)

Query: 4   MLNLHSK-LARVGVSIANHL--RNYSSSLCRVGLLQCSRNH--CLQPSFQQHSFTKLYEG 58
           MLNL+S+ LAR  +SIA H   RNY +S+CR G  + + NH  CLQPSFQQ S   LY+G
Sbjct: 1   MLNLNSRRLARAAISIAKHFSTRNYYTSMCRAGYSRTTPNHYDCLQPSFQQSSLFNLYKG 60

Query: 59  SIFEKHNFLSTVATNDT-EDKSEQKETISVTFVDKDGEEKLIKVPVGMSMLEAAHENDIE 117
           ++F+KHNFLST  +N+T ED SE+ ETISVTFVDKDGEEKLIKVP+GMSMLEAAHENDIE
Sbjct: 61  AMFKKHNFLSTTTSNNTAEDGSEEIETISVTFVDKDGEEKLIKVPIGMSMLEAAHENDIE 120

Query: 118 LEGACEGSLACSTCHVIIMDVEQYNKLEDPTDEENDMLDLAFGLTETSRLGCQVIAKPEL 177
           LEGACEGSLACSTCHVI+MDVE YNKLEDPTDEENDMLDLAFGL ETSRLGCQVIA  EL
Sbjct: 121 LEGACEGSLACSTCHVIVMDVEYYNKLEDPTDEENDMLDLAFGLCETSRLGCQVIATREL 180

Query: 178 DGIRLAIPAATRNFAVDGFVPKPH 201
           DG+RLA+PAATRNFAVDG+VPKPH
Sbjct: 181 DGVRLALPAATRNFAVDGYVPKPH 204


>Medtr4g131820.2 | 2Fe-2S iron-sulfur cluster-binding domain protein
           | HC | chr4:55005695-55010362 | 20130731
          Length = 176

 Score =  292 bits (748), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 141/176 (80%), Positives = 156/176 (88%), Gaps = 3/176 (1%)

Query: 29  LCRVGLLQCSRNH--CLQPSFQQHSFTKLYEGSIFEKHNFLSTVATNDT-EDKSEQKETI 85
           +CR G  + + NH  CLQPSFQQ S   LY+G++F+KHNFLST  +N+T ED SE+ ETI
Sbjct: 1   MCRAGYSRTTPNHYDCLQPSFQQSSLFNLYKGAMFKKHNFLSTTTSNNTAEDGSEEIETI 60

Query: 86  SVTFVDKDGEEKLIKVPVGMSMLEAAHENDIELEGACEGSLACSTCHVIIMDVEQYNKLE 145
           SVTFVDKDGEEKLIKVP+GMSMLEAAHENDIELEGACEGSLACSTCHVI+MDVE YNKLE
Sbjct: 61  SVTFVDKDGEEKLIKVPIGMSMLEAAHENDIELEGACEGSLACSTCHVIVMDVEYYNKLE 120

Query: 146 DPTDEENDMLDLAFGLTETSRLGCQVIAKPELDGIRLAIPAATRNFAVDGFVPKPH 201
           DPTDEENDMLDLAFGL ETSRLGCQVIA  ELDG+RLA+PAATRNFAVDG+VPKPH
Sbjct: 121 DPTDEENDMLDLAFGLCETSRLGCQVIATRELDGVRLALPAATRNFAVDGYVPKPH 176


>Medtr1g112970.1 | 2Fe-2S iron-sulfur cluster-binding domain protein
           | HC | chr1:51234228-51233266 | 20130731
          Length = 128

 Score =  218 bits (555), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 104/123 (84%), Positives = 111/123 (90%)

Query: 79  SEQKETISVTFVDKDGEEKLIKVPVGMSMLEAAHENDIELEGACEGSLACSTCHVIIMDV 138
           S     ISVTFV+KDGEEKLIKVP+GMSMLEAAH NDIELEGACE SLACSTCHVI+ DV
Sbjct: 6   SSGSHMISVTFVEKDGEEKLIKVPIGMSMLEAAHVNDIELEGACESSLACSTCHVIVKDV 65

Query: 139 EQYNKLEDPTDEENDMLDLAFGLTETSRLGCQVIAKPELDGIRLAIPAATRNFAVDGFVP 198
           E YNKLED TDEENDMLDLAFGL ETSRLGCQVIA P+LDGIRLA+P+ATRNFAVDG+VP
Sbjct: 66  EYYNKLEDATDEENDMLDLAFGLCETSRLGCQVIATPKLDGIRLALPSATRNFAVDGYVP 125

Query: 199 KPH 201
           KPH
Sbjct: 126 KPH 128


>Medtr4g131820.3 | 2Fe-2S iron-sulfur cluster-binding domain protein
           | HC | chr4:55005695-55010362 | 20130731
          Length = 143

 Score =  196 bits (498), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 99/139 (71%), Positives = 115/139 (82%), Gaps = 6/139 (4%)

Query: 4   MLNLHSK-LARVGVSIANHL--RNYSSSLCRVGLLQCSRNH--CLQPSFQQHSFTKLYEG 58
           MLNL+S+ LAR  +SIA H   RNY +S+CR G  + + NH  CLQPSFQQ S   LY+G
Sbjct: 1   MLNLNSRRLARAAISIAKHFSTRNYYTSMCRAGYSRTTPNHYDCLQPSFQQSSLFNLYKG 60

Query: 59  SIFEKHNFLSTVATNDT-EDKSEQKETISVTFVDKDGEEKLIKVPVGMSMLEAAHENDIE 117
           ++F+KHNFLST  +N+T ED SE+ ETISVTFVDKDGEEKLIKVP+GMSMLEAAHENDIE
Sbjct: 61  AMFKKHNFLSTTTSNNTAEDGSEEIETISVTFVDKDGEEKLIKVPIGMSMLEAAHENDIE 120

Query: 118 LEGACEGSLACSTCHVIIM 136
           LEGACEGSLACSTCHVI+M
Sbjct: 121 LEGACEGSLACSTCHVIVM 139


>Medtr4g124760.1 | ferredoxin, putative | LC |
           chr4:51713983-51715034 | 20130731
          Length = 56

 Score = 55.1 bits (131), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 28/45 (62%), Positives = 31/45 (68%), Gaps = 3/45 (6%)

Query: 159 FGLTE---TSRLGCQVIAKPELDGIRLAIPAATRNFAVDGFVPKP 200
           FGL E    S L CQVIAK ELD + L I   T+NFAVDG+VPKP
Sbjct: 11  FGLKEHLQRSHLSCQVIAKAELDIVHLTITDTTQNFAVDGYVPKP 55