Miyakogusa Predicted Gene

Lj4g3v3059270.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v3059270.1 Non Characterized Hit- tr|K4BX37|K4BX37_SOLLC
Uncharacterized protein OS=Solanum lycopersicum GN=Sol,73.91,3e-37,no
description,NULL; POLY(A) POLYMERASE-RELATED,NULL; POLY(A)
POLYMERASE,NULL; PAP_central,Poly(A) p,CUFF.52208.1
         (92 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g106560.2 | poly(A) polymerase-like protein | HC | chr8:44...   156   4e-39
Medtr8g106560.1 | poly(A) polymerase-like protein | HC | chr8:44...   156   4e-39
Medtr8g106560.3 | poly(A) polymerase-like protein | HC | chr8:44...   156   4e-39
Medtr0283s0030.1 | poly(A) polymerase | HC | scaffold0283:12811-...   154   1e-38
Medtr6g082000.1 | poly(A) polymerase-like protein | HC | chr6:30...   149   5e-37
Medtr3g110375.7 | poly(A) polymerase-like protein | HC | chr3:51...   134   2e-32
Medtr3g110375.3 | poly(A) polymerase-like protein | HC | chr3:51...   134   2e-32
Medtr3g110375.4 | poly(A) polymerase-like protein | HC | chr3:51...   134   2e-32
Medtr3g110375.9 | poly(A) polymerase-like protein | HC | chr3:51...   134   2e-32
Medtr3g110375.5 | poly(A) polymerase-like protein | HC | chr3:51...   134   2e-32
Medtr3g110375.6 | poly(A) polymerase-like protein | HC | chr3:51...   134   2e-32
Medtr3g110375.2 | poly(A) polymerase-like protein | HC | chr3:51...   134   2e-32
Medtr3g110375.8 | poly(A) polymerase-like protein | HC | chr3:51...   134   2e-32
Medtr8g014560.4 | poly(A) polymerase | HC | chr8:4593559-4588712...   129   5e-31
Medtr8g014560.1 | poly(A) polymerase | HC | chr8:4593559-4588712...   129   5e-31
Medtr8g014560.5 | poly(A) polymerase | HC | chr8:4593559-4588712...   129   5e-31
Medtr8g014560.6 | poly(A) polymerase | HC | chr8:4593559-4588712...   129   5e-31
Medtr8g014560.2 | poly(A) polymerase | HC | chr8:4593559-4588003...   129   5e-31
Medtr8g014560.3 | poly(A) polymerase | HC | chr8:4593559-4588008...   129   5e-31
Medtr8g014560.7 | poly(A) polymerase | HC | chr8:4592600-4588712...   129   5e-31
Medtr3g110375.1 | poly(A) polymerase-like protein | HC | chr3:51...   115   8e-27

>Medtr8g106560.2 | poly(A) polymerase-like protein | HC |
           chr8:44967321-44960896 | 20130731
          Length = 754

 Score =  156 bits (394), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 69/92 (75%), Positives = 83/92 (90%)

Query: 1   MPEVTELHPVPNASVPLMKFKVNGVSIDLIYARLSLLVIPEDLDISQDSVLQNADEQTVR 60
           MPEVTELHPVP+A VP+M FK NGVS+DL+YA+LSL VIPEDLD+SQ+++LQ  DEQTVR
Sbjct: 138 MPEVTELHPVPDAHVPVMGFKFNGVSLDLLYAQLSLWVIPEDLDLSQEAILQYTDEQTVR 197

Query: 61  SLNSCRMTDKILHLVPNIQNFQMALRCIRLWA 92
           SLN CR+TD+ILHLVPNIQNF+  LRC++LWA
Sbjct: 198 SLNGCRVTDQILHLVPNIQNFRTTLRCVKLWA 229


>Medtr8g106560.1 | poly(A) polymerase-like protein | HC |
           chr8:44967313-44960863 | 20130731
          Length = 754

 Score =  156 bits (394), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 69/92 (75%), Positives = 83/92 (90%)

Query: 1   MPEVTELHPVPNASVPLMKFKVNGVSIDLIYARLSLLVIPEDLDISQDSVLQNADEQTVR 60
           MPEVTELHPVP+A VP+M FK NGVS+DL+YA+LSL VIPEDLD+SQ+++LQ  DEQTVR
Sbjct: 138 MPEVTELHPVPDAHVPVMGFKFNGVSLDLLYAQLSLWVIPEDLDLSQEAILQYTDEQTVR 197

Query: 61  SLNSCRMTDKILHLVPNIQNFQMALRCIRLWA 92
           SLN CR+TD+ILHLVPNIQNF+  LRC++LWA
Sbjct: 198 SLNGCRVTDQILHLVPNIQNFRTTLRCVKLWA 229


>Medtr8g106560.3 | poly(A) polymerase-like protein | HC |
           chr8:44967321-44960896 | 20130731
          Length = 754

 Score =  156 bits (394), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 69/92 (75%), Positives = 83/92 (90%)

Query: 1   MPEVTELHPVPNASVPLMKFKVNGVSIDLIYARLSLLVIPEDLDISQDSVLQNADEQTVR 60
           MPEVTELHPVP+A VP+M FK NGVS+DL+YA+LSL VIPEDLD+SQ+++LQ  DEQTVR
Sbjct: 138 MPEVTELHPVPDAHVPVMGFKFNGVSLDLLYAQLSLWVIPEDLDLSQEAILQYTDEQTVR 197

Query: 61  SLNSCRMTDKILHLVPNIQNFQMALRCIRLWA 92
           SLN CR+TD+ILHLVPNIQNF+  LRC++LWA
Sbjct: 198 SLNGCRVTDQILHLVPNIQNFRTTLRCVKLWA 229


>Medtr0283s0030.1 | poly(A) polymerase | HC |
           scaffold0283:12811-10616 | 20130731
          Length = 357

 Score =  154 bits (390), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 69/92 (75%), Positives = 83/92 (90%)

Query: 1   MPEVTELHPVPNASVPLMKFKVNGVSIDLIYARLSLLVIPEDLDISQDSVLQNADEQTVR 60
           MPEVTELHPVP+A VP+M FK NGVS+DL+YA+LSL VIPEDLD+SQ+++LQ  DEQTVR
Sbjct: 138 MPEVTELHPVPDAHVPVMGFKFNGVSLDLLYAQLSLWVIPEDLDLSQEAILQYTDEQTVR 197

Query: 61  SLNSCRMTDKILHLVPNIQNFQMALRCIRLWA 92
           SLN CR+TD+ILHLVPNIQNF+  LRC++LWA
Sbjct: 198 SLNGCRVTDQILHLVPNIQNFRTTLRCVKLWA 229


>Medtr6g082000.1 | poly(A) polymerase-like protein | HC |
           chr6:30599628-30606293 | 20130731
          Length = 752

 Score =  149 bits (376), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 68/92 (73%), Positives = 80/92 (86%)

Query: 1   MPEVTELHPVPNASVPLMKFKVNGVSIDLIYARLSLLVIPEDLDISQDSVLQNADEQTVR 60
           M EVTELHPVP+A VP+MKFK NGVS+DL+YARL+L VIPEDLDISQ+S+LQN DEQTV 
Sbjct: 137 MEEVTELHPVPDAHVPVMKFKFNGVSVDLLYARLALWVIPEDLDISQESILQNVDEQTVL 196

Query: 61  SLNSCRMTDKILHLVPNIQNFQMALRCIRLWA 92
           SLN CR+TD++L LVPNIQNF+  LR +R WA
Sbjct: 197 SLNGCRVTDQVLRLVPNIQNFRTTLRFMRFWA 228


>Medtr3g110375.7 | poly(A) polymerase-like protein | HC |
           chr3:51561683-51555466 | 20130731
          Length = 722

 Score =  134 bits (337), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 60/92 (65%), Positives = 76/92 (82%)

Query: 1   MPEVTELHPVPNASVPLMKFKVNGVSIDLIYARLSLLVIPEDLDISQDSVLQNADEQTVR 60
           M EVTEL PVP+A VP+MKFK  G+SIDL+YA +S+LV+PEDLDIS  SVL + DEQTVR
Sbjct: 145 MEEVTELQPVPDAHVPVMKFKFQGISIDLLYASISILVVPEDLDISDGSVLYDVDEQTVR 204

Query: 61  SLNSCRMTDKILHLVPNIQNFQMALRCIRLWA 92
           SLN CR+ D+IL LVPN+++F+  LRC++ WA
Sbjct: 205 SLNGCRVADQILKLVPNVEHFRTTLRCLKFWA 236


>Medtr3g110375.3 | poly(A) polymerase-like protein | HC |
           chr3:51561695-51555466 | 20130731
          Length = 719

 Score =  134 bits (337), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 60/92 (65%), Positives = 76/92 (82%)

Query: 1   MPEVTELHPVPNASVPLMKFKVNGVSIDLIYARLSLLVIPEDLDISQDSVLQNADEQTVR 60
           M EVTEL PVP+A VP+MKFK  G+SIDL+YA +S+LV+PEDLDIS  SVL + DEQTVR
Sbjct: 145 MEEVTELQPVPDAHVPVMKFKFQGISIDLLYASISILVVPEDLDISDGSVLYDVDEQTVR 204

Query: 61  SLNSCRMTDKILHLVPNIQNFQMALRCIRLWA 92
           SLN CR+ D+IL LVPN+++F+  LRC++ WA
Sbjct: 205 SLNGCRVADQILKLVPNVEHFRTTLRCLKFWA 236


>Medtr3g110375.4 | poly(A) polymerase-like protein | HC |
           chr3:51561695-51555466 | 20130731
          Length = 719

 Score =  134 bits (337), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 60/92 (65%), Positives = 76/92 (82%)

Query: 1   MPEVTELHPVPNASVPLMKFKVNGVSIDLIYARLSLLVIPEDLDISQDSVLQNADEQTVR 60
           M EVTEL PVP+A VP+MKFK  G+SIDL+YA +S+LV+PEDLDIS  SVL + DEQTVR
Sbjct: 145 MEEVTELQPVPDAHVPVMKFKFQGISIDLLYASISILVVPEDLDISDGSVLYDVDEQTVR 204

Query: 61  SLNSCRMTDKILHLVPNIQNFQMALRCIRLWA 92
           SLN CR+ D+IL LVPN+++F+  LRC++ WA
Sbjct: 205 SLNGCRVADQILKLVPNVEHFRTTLRCLKFWA 236


>Medtr3g110375.9 | poly(A) polymerase-like protein | HC |
           chr3:51561676-51555466 | 20130731
          Length = 671

 Score =  134 bits (336), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 60/92 (65%), Positives = 76/92 (82%)

Query: 1   MPEVTELHPVPNASVPLMKFKVNGVSIDLIYARLSLLVIPEDLDISQDSVLQNADEQTVR 60
           M EVTEL PVP+A VP+MKFK  G+SIDL+YA +S+LV+PEDLDIS  SVL + DEQTVR
Sbjct: 145 MEEVTELQPVPDAHVPVMKFKFQGISIDLLYASISILVVPEDLDISDGSVLYDVDEQTVR 204

Query: 61  SLNSCRMTDKILHLVPNIQNFQMALRCIRLWA 92
           SLN CR+ D+IL LVPN+++F+  LRC++ WA
Sbjct: 205 SLNGCRVADQILKLVPNVEHFRTTLRCLKFWA 236


>Medtr3g110375.5 | poly(A) polymerase-like protein | HC |
           chr3:51561695-51555466 | 20130731
          Length = 671

 Score =  134 bits (336), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 60/92 (65%), Positives = 76/92 (82%)

Query: 1   MPEVTELHPVPNASVPLMKFKVNGVSIDLIYARLSLLVIPEDLDISQDSVLQNADEQTVR 60
           M EVTEL PVP+A VP+MKFK  G+SIDL+YA +S+LV+PEDLDIS  SVL + DEQTVR
Sbjct: 145 MEEVTELQPVPDAHVPVMKFKFQGISIDLLYASISILVVPEDLDISDGSVLYDVDEQTVR 204

Query: 61  SLNSCRMTDKILHLVPNIQNFQMALRCIRLWA 92
           SLN CR+ D+IL LVPN+++F+  LRC++ WA
Sbjct: 205 SLNGCRVADQILKLVPNVEHFRTTLRCLKFWA 236


>Medtr3g110375.6 | poly(A) polymerase-like protein | HC |
           chr3:51561695-51555466 | 20130731
          Length = 671

 Score =  134 bits (336), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 60/92 (65%), Positives = 76/92 (82%)

Query: 1   MPEVTELHPVPNASVPLMKFKVNGVSIDLIYARLSLLVIPEDLDISQDSVLQNADEQTVR 60
           M EVTEL PVP+A VP+MKFK  G+SIDL+YA +S+LV+PEDLDIS  SVL + DEQTVR
Sbjct: 145 MEEVTELQPVPDAHVPVMKFKFQGISIDLLYASISILVVPEDLDISDGSVLYDVDEQTVR 204

Query: 61  SLNSCRMTDKILHLVPNIQNFQMALRCIRLWA 92
           SLN CR+ D+IL LVPN+++F+  LRC++ WA
Sbjct: 205 SLNGCRVADQILKLVPNVEHFRTTLRCLKFWA 236


>Medtr3g110375.2 | poly(A) polymerase-like protein | HC |
           chr3:51561695-51555466 | 20130731
          Length = 671

 Score =  134 bits (336), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 60/92 (65%), Positives = 76/92 (82%)

Query: 1   MPEVTELHPVPNASVPLMKFKVNGVSIDLIYARLSLLVIPEDLDISQDSVLQNADEQTVR 60
           M EVTEL PVP+A VP+MKFK  G+SIDL+YA +S+LV+PEDLDIS  SVL + DEQTVR
Sbjct: 145 MEEVTELQPVPDAHVPVMKFKFQGISIDLLYASISILVVPEDLDISDGSVLYDVDEQTVR 204

Query: 61  SLNSCRMTDKILHLVPNIQNFQMALRCIRLWA 92
           SLN CR+ D+IL LVPN+++F+  LRC++ WA
Sbjct: 205 SLNGCRVADQILKLVPNVEHFRTTLRCLKFWA 236


>Medtr3g110375.8 | poly(A) polymerase-like protein | HC |
           chr3:51561676-51555466 | 20130731
          Length = 671

 Score =  134 bits (336), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 60/92 (65%), Positives = 76/92 (82%)

Query: 1   MPEVTELHPVPNASVPLMKFKVNGVSIDLIYARLSLLVIPEDLDISQDSVLQNADEQTVR 60
           M EVTEL PVP+A VP+MKFK  G+SIDL+YA +S+LV+PEDLDIS  SVL + DEQTVR
Sbjct: 145 MEEVTELQPVPDAHVPVMKFKFQGISIDLLYASISILVVPEDLDISDGSVLYDVDEQTVR 204

Query: 61  SLNSCRMTDKILHLVPNIQNFQMALRCIRLWA 92
           SLN CR+ D+IL LVPN+++F+  LRC++ WA
Sbjct: 205 SLNGCRVADQILKLVPNVEHFRTTLRCLKFWA 236


>Medtr8g014560.4 | poly(A) polymerase | HC | chr8:4593559-4588712 |
           20130731
          Length = 625

 Score =  129 bits (325), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 59/92 (64%), Positives = 74/92 (80%)

Query: 1   MPEVTELHPVPNASVPLMKFKVNGVSIDLIYARLSLLVIPEDLDISQDSVLQNADEQTVR 60
           M EVTEL PVP+A VP+MKFK +G+SIDL+YA +S L++PE+LDIS  SVL N DE TVR
Sbjct: 53  MDEVTELQPVPDAHVPVMKFKFDGISIDLLYASISCLIVPEELDISDVSVLHNIDEPTVR 112

Query: 61  SLNSCRMTDKILHLVPNIQNFQMALRCIRLWA 92
           SLN CR+ D+IL LVPNI+ F+  LRC++ WA
Sbjct: 113 SLNGCRVADQILKLVPNIEYFRTTLRCLKFWA 144


>Medtr8g014560.1 | poly(A) polymerase | HC | chr8:4593559-4588712 |
           20130731
          Length = 633

 Score =  129 bits (324), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 59/92 (64%), Positives = 74/92 (80%)

Query: 1   MPEVTELHPVPNASVPLMKFKVNGVSIDLIYARLSLLVIPEDLDISQDSVLQNADEQTVR 60
           M EVTEL PVP+A VP+MKFK +G+SIDL+YA +S L++PE+LDIS  SVL N DE TVR
Sbjct: 53  MDEVTELQPVPDAHVPVMKFKFDGISIDLLYASISCLIVPEELDISDVSVLHNIDEPTVR 112

Query: 61  SLNSCRMTDKILHLVPNIQNFQMALRCIRLWA 92
           SLN CR+ D+IL LVPNI+ F+  LRC++ WA
Sbjct: 113 SLNGCRVADQILKLVPNIEYFRTTLRCLKFWA 144


>Medtr8g014560.5 | poly(A) polymerase | HC | chr8:4593559-4588712 |
           20130731
          Length = 638

 Score =  129 bits (324), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 59/92 (64%), Positives = 74/92 (80%)

Query: 1   MPEVTELHPVPNASVPLMKFKVNGVSIDLIYARLSLLVIPEDLDISQDSVLQNADEQTVR 60
           M EVTEL PVP+A VP+MKFK +G+SIDL+YA +S L++PE+LDIS  SVL N DE TVR
Sbjct: 53  MDEVTELQPVPDAHVPVMKFKFDGISIDLLYASISCLIVPEELDISDVSVLHNIDEPTVR 112

Query: 61  SLNSCRMTDKILHLVPNIQNFQMALRCIRLWA 92
           SLN CR+ D+IL LVPNI+ F+  LRC++ WA
Sbjct: 113 SLNGCRVADQILKLVPNIEYFRTTLRCLKFWA 144


>Medtr8g014560.6 | poly(A) polymerase | HC | chr8:4593559-4588712 |
           20130731
          Length = 638

 Score =  129 bits (324), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 59/92 (64%), Positives = 74/92 (80%)

Query: 1   MPEVTELHPVPNASVPLMKFKVNGVSIDLIYARLSLLVIPEDLDISQDSVLQNADEQTVR 60
           M EVTEL PVP+A VP+MKFK +G+SIDL+YA +S L++PE+LDIS  SVL N DE TVR
Sbjct: 53  MDEVTELQPVPDAHVPVMKFKFDGISIDLLYASISCLIVPEELDISDVSVLHNIDEPTVR 112

Query: 61  SLNSCRMTDKILHLVPNIQNFQMALRCIRLWA 92
           SLN CR+ D+IL LVPNI+ F+  LRC++ WA
Sbjct: 113 SLNGCRVADQILKLVPNIEYFRTTLRCLKFWA 144


>Medtr8g014560.2 | poly(A) polymerase | HC | chr8:4593559-4588003 |
           20130731
          Length = 633

 Score =  129 bits (324), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 59/92 (64%), Positives = 74/92 (80%)

Query: 1   MPEVTELHPVPNASVPLMKFKVNGVSIDLIYARLSLLVIPEDLDISQDSVLQNADEQTVR 60
           M EVTEL PVP+A VP+MKFK +G+SIDL+YA +S L++PE+LDIS  SVL N DE TVR
Sbjct: 53  MDEVTELQPVPDAHVPVMKFKFDGISIDLLYASISCLIVPEELDISDVSVLHNIDEPTVR 112

Query: 61  SLNSCRMTDKILHLVPNIQNFQMALRCIRLWA 92
           SLN CR+ D+IL LVPNI+ F+  LRC++ WA
Sbjct: 113 SLNGCRVADQILKLVPNIEYFRTTLRCLKFWA 144


>Medtr8g014560.3 | poly(A) polymerase | HC | chr8:4593559-4588008 |
           20130731
          Length = 638

 Score =  129 bits (324), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 59/92 (64%), Positives = 74/92 (80%)

Query: 1   MPEVTELHPVPNASVPLMKFKVNGVSIDLIYARLSLLVIPEDLDISQDSVLQNADEQTVR 60
           M EVTEL PVP+A VP+MKFK +G+SIDL+YA +S L++PE+LDIS  SVL N DE TVR
Sbjct: 53  MDEVTELQPVPDAHVPVMKFKFDGISIDLLYASISCLIVPEELDISDVSVLHNIDEPTVR 112

Query: 61  SLNSCRMTDKILHLVPNIQNFQMALRCIRLWA 92
           SLN CR+ D+IL LVPNI+ F+  LRC++ WA
Sbjct: 113 SLNGCRVADQILKLVPNIEYFRTTLRCLKFWA 144


>Medtr8g014560.7 | poly(A) polymerase | HC | chr8:4592600-4588712 |
           20130731
          Length = 633

 Score =  129 bits (324), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 59/92 (64%), Positives = 74/92 (80%)

Query: 1   MPEVTELHPVPNASVPLMKFKVNGVSIDLIYARLSLLVIPEDLDISQDSVLQNADEQTVR 60
           M EVTEL PVP+A VP+MKFK +G+SIDL+YA +S L++PE+LDIS  SVL N DE TVR
Sbjct: 53  MDEVTELQPVPDAHVPVMKFKFDGISIDLLYASISCLIVPEELDISDVSVLHNIDEPTVR 112

Query: 61  SLNSCRMTDKILHLVPNIQNFQMALRCIRLWA 92
           SLN CR+ D+IL LVPNI+ F+  LRC++ WA
Sbjct: 113 SLNGCRVADQILKLVPNIEYFRTTLRCLKFWA 144


>Medtr3g110375.1 | poly(A) polymerase-like protein | HC |
           chr3:51561537-51555466 | 20130731
          Length = 701

 Score =  115 bits (289), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 54/79 (68%), Positives = 66/79 (83%)

Query: 1   MPEVTELHPVPNASVPLMKFKVNGVSIDLIYARLSLLVIPEDLDISQDSVLQNADEQTVR 60
           M EVTEL PVP+A VP+MKFK  G+SIDL+YA +S+LV+PEDLDIS  SVL + DEQTVR
Sbjct: 145 MEEVTELQPVPDAHVPVMKFKFQGISIDLLYASISILVVPEDLDISDGSVLYDVDEQTVR 204

Query: 61  SLNSCRMTDKILHLVPNIQ 79
           SLN CR+ D+IL LVPN++
Sbjct: 205 SLNGCRVADQILKLVPNVE 223