Miyakogusa Predicted Gene

Lj4g3v3015060.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v3015060.1 Non Characterized Hit- tr|A9NL71|A9NL71_PICSI
Putative uncharacterized protein OS=Picea sitchensis
P,58.33,3e-17,seg,NULL; Tom7,Mitochondrial outer membrane translocase
complex, subunit Tom7,CUFF.52123.1
         (72 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g055500.1 | import receptor subunit TOM7-1 | LC | chr3:218...    88   1e-18
Medtr3g462060.1 | import receptor subunit TOM7-1 | HC | chr3:247...    88   2e-18
Medtr2g067370.1 | import receptor subunit TOM7-1 | HC | chr2:281...    87   4e-18
Medtr3g061970.1 | import receptor subunit TOM7-1 | LC | chr3:247...    71   2e-13

>Medtr3g055500.1 | import receptor subunit TOM7-1 | LC |
          chr3:21833154-21833612 | 20130731
          Length = 133

 Score = 88.2 bits (217), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 38/48 (79%), Positives = 43/48 (89%)

Query: 24 TACECLKEWTTWTMRKAKVVTHYGFIPLIIIIGMNSDPKPQLSQLLSP 71
          +A + LKEWTTW ++K KV+ HYGFIPLIIIIGMNSDPKPQLSQLLSP
Sbjct: 22 SAIDSLKEWTTWGIKKTKVIAHYGFIPLIIIIGMNSDPKPQLSQLLSP 69


>Medtr3g462060.1 | import receptor subunit TOM7-1 | HC |
          chr3:24744848-24746536 | 20130731
          Length = 70

 Score = 88.2 bits (217), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 38/49 (77%), Positives = 43/49 (87%)

Query: 24 TACECLKEWTTWTMRKAKVVTHYGFIPLIIIIGMNSDPKPQLSQLLSPV 72
          +  + +KEWTTW M+K KV+ HYGFIPLIIIIGMNSDPKPQLSQLLSPV
Sbjct: 22 SVIDSVKEWTTWGMKKTKVIAHYGFIPLIIIIGMNSDPKPQLSQLLSPV 70


>Medtr2g067370.1 | import receptor subunit TOM7-1 | HC |
          chr2:28185863-28185043 | 20130731
          Length = 70

 Score = 87.0 bits (214), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 37/49 (75%), Positives = 43/49 (87%)

Query: 24 TACECLKEWTTWTMRKAKVVTHYGFIPLIIIIGMNSDPKPQLSQLLSPV 72
          +  + +KEWTTW M+K KV+ HYGFIPLIIIIGMNSDPKPQ+SQLLSPV
Sbjct: 22 SVIDSVKEWTTWGMKKTKVIAHYGFIPLIIIIGMNSDPKPQISQLLSPV 70


>Medtr3g061970.1 | import receptor subunit TOM7-1 | LC |
          chr3:24708695-24708985 | 20130731
          Length = 96

 Score = 71.2 bits (173), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 32/46 (69%), Positives = 37/46 (80%)

Query: 27 ECLKEWTTWTMRKAKVVTHYGFIPLIIIIGMNSDPKPQLSQLLSPV 72
          + +KEW TW ++K KV+ H GFIPLIIIIGM SD KPQL QLLSPV
Sbjct: 25 DSVKEWKTWGLKKTKVIAHCGFIPLIIIIGMTSDQKPQLYQLLSPV 70