Miyakogusa Predicted Gene

Lj4g3v3002500.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v3002500.1 Non Characterized Hit- tr|I3S1Y2|I3S1Y2_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,98.33,0,ATP_synth_E_arch,ATPase, V1/A1 complex, subunit E;
coiled-coil,NULL; seg,NULL; VACUOLAR ATP SYNTHASE,CUFF.51996.1
         (240 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g099190.1 | archaeal/vacuolar-type H+-ATPase subunit E | H...   344   3e-95
Medtr5g009720.1 | archaeal/vacuolar-type H+-ATPase subunit E | H...   339   2e-93
Medtr8g099190.4 | archaeal/vacuolar-type H+-ATPase subunit E | H...   335   2e-92
Medtr8g099190.2 | archaeal/vacuolar-type H+-ATPase subunit E | H...   307   6e-84
Medtr4g073800.1 | archaeal/vacuolar-type H+-ATPase subunit E | H...   272   2e-73
Medtr8g099190.3 | archaeal/vacuolar-type H+-ATPase subunit E | H...   263   1e-70

>Medtr8g099190.1 | archaeal/vacuolar-type H+-ATPase subunit E | HC |
           chr8:41719984-41715699 | 20130731
          Length = 240

 Score =  344 bits (883), Expect = 3e-95,   Method: Compositional matrix adjust.
 Identities = 175/240 (72%), Positives = 193/240 (80%)

Query: 1   MNDGDVSKQIQQMVRFIRQEAEEKANEISVSAEEEFNIEKLQLVEAXXXXXXXXXXXXXX 60
           MNDGDVSKQI QMVRFIRQEAEEKA+EIS+SAEEEFNIEKLQLVEA              
Sbjct: 1   MNDGDVSKQIHQMVRFIRQEAEEKASEISLSAEEEFNIEKLQLVEAEKKKIRQEYERKER 60

Query: 61  XXXXXXXXXXSMQLNASRIKVLQAQDDLVNTMKEAASKELLNVSHHRNILDALSHHHHVY 120
                     SMQLNASRI VLQAQDD+VN+MKE  +KELLNVS H  + D L   +H Y
Sbjct: 61  QVEIRKKIEYSMQLNASRINVLQAQDDIVNSMKEVTAKELLNVSRHHLVEDILHVGNHEY 120

Query: 121 KHLLKDLIIQSLLRLKEPSVLLRCREHDLHLVEHVLDSAAEEYAEKANVPQPEIIVDKHV 180
           ++LLK LI+QSLLRL+EPSVLLRC++HD+HLVEHVLD+AA+EYAEKA V  PEIIVD  V
Sbjct: 121 RNLLKGLIVQSLLRLREPSVLLRCQKHDVHLVEHVLDAAAQEYAEKAGVYPPEIIVDHSV 180

Query: 181 YLPPAPSHHNTHDPYCSGGVVLASRDGKIVIENTLDARLDVLFRKKLPAIRKQLFGQVAA 240
           YLPPAP HHNTH+PYCSGGVVLASRDGKIV ENTLDARLDV+FRKKLP IRKQLFGQ AA
Sbjct: 181 YLPPAPKHHNTHEPYCSGGVVLASRDGKIVCENTLDARLDVVFRKKLPEIRKQLFGQAAA 240


>Medtr5g009720.1 | archaeal/vacuolar-type H+-ATPase subunit E | HC |
           chr5:2418104-2422596 | 20130731
          Length = 230

 Score =  339 bits (869), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 178/239 (74%), Positives = 190/239 (79%), Gaps = 10/239 (4%)

Query: 1   MNDGDVSKQIQQMVRFIRQEAEEKANEISVSAEEEFNIEKLQLVEAXXXXXXXXXXXXXX 60
           MND DVSKQIQQMVRFIRQEAEEKANEISVSAEEEFNIEKLQLVEA              
Sbjct: 1   MNDADVSKQIQQMVRFIRQEAEEKANEISVSAEEEFNIEKLQLVEADKKKIRQEYERKEK 60

Query: 61  XXXXXXXXXXSMQLNASRIKVLQAQDDLVNTMKEAASKELLNVSHHRNILDALSHHHHVY 120
                     SMQLNASR+KVLQAQDD+VN MKE+A+KELLNVS            HHVY
Sbjct: 61  QVDVRKKIEYSMQLNASRLKVLQAQDDVVNKMKESAAKELLNVSRD----------HHVY 110

Query: 121 KHLLKDLIIQSLLRLKEPSVLLRCREHDLHLVEHVLDSAAEEYAEKANVPQPEIIVDKHV 180
           K+LLKDL+IQSLLRLKEPSVLLRCR+ DL+LVE VLDSAA+EYAEKANV  PEI+VDK V
Sbjct: 111 KNLLKDLVIQSLLRLKEPSVLLRCRKEDLNLVEDVLDSAAKEYAEKANVHVPEIVVDKDV 170

Query: 181 YLPPAPSHHNTHDPYCSGGVVLASRDGKIVIENTLDARLDVLFRKKLPAIRKQLFGQVA 239
           YLPPAPSHHN HD +CSGGVVLAS DGKIV ENTLDARLDV+FR KLP IRKQLFGQVA
Sbjct: 171 YLPPAPSHHNPHDLHCSGGVVLASHDGKIVFENTLDARLDVVFRNKLPHIRKQLFGQVA 229


>Medtr8g099190.4 | archaeal/vacuolar-type H+-ATPase subunit E | HC |
           chr8:41719984-41715699 | 20130731
          Length = 252

 Score =  335 bits (859), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 175/252 (69%), Positives = 193/252 (76%), Gaps = 12/252 (4%)

Query: 1   MNDGDVSKQIQQMVRFIRQEAEEKANEISVSAEEEFNIEKLQLVEAXXXXXXXXXXXXXX 60
           MNDGDVSKQI QMVRFIRQEAEEKA+EIS+SAEEEFNIEKLQLVEA              
Sbjct: 1   MNDGDVSKQIHQMVRFIRQEAEEKASEISLSAEEEFNIEKLQLVEAEKKKIRQEYERKER 60

Query: 61  XXXXXXXXXXSMQLNASRIKVLQAQDDLVNTMKEAASKELLNVSHHRNILDALSHHHHVY 120
                     SMQLNASRI VLQAQDD+VN+MKE  +KELLNVS H  + D L   +H Y
Sbjct: 61  QVEIRKKIEYSMQLNASRINVLQAQDDIVNSMKEVTAKELLNVSRHHLVEDILHVGNHEY 120

Query: 121 KHLLKDLIIQSLLRLKEPSVLLRCREHDLHLVEHVLDSAAEEYAEKANVPQPEIIVDKHV 180
           ++LLK LI+QSLLRL+EPSVLLRC++HD+HLVEHVLD+AA+EYAEKA V  PEIIVD  V
Sbjct: 121 RNLLKGLIVQSLLRLREPSVLLRCQKHDVHLVEHVLDAAAQEYAEKAGVYPPEIIVDHSV 180

Query: 181 YLPPAPSHHNTHDPYC------------SGGVVLASRDGKIVIENTLDARLDVLFRKKLP 228
           YLPPAP HHNTH+PYC            SGGVVLASRDGKIV ENTLDARLDV+FRKKLP
Sbjct: 181 YLPPAPKHHNTHEPYCFSIPDYICGKFSSGGVVLASRDGKIVCENTLDARLDVVFRKKLP 240

Query: 229 AIRKQLFGQVAA 240
            IRKQLFGQ AA
Sbjct: 241 EIRKQLFGQAAA 252


>Medtr8g099190.2 | archaeal/vacuolar-type H+-ATPase subunit E | HC |
           chr8:41719984-41715699 | 20130731
          Length = 225

 Score =  307 bits (786), Expect = 6e-84,   Method: Compositional matrix adjust.
 Identities = 162/240 (67%), Positives = 178/240 (74%), Gaps = 15/240 (6%)

Query: 1   MNDGDVSKQIQQMVRFIRQEAEEKANEISVSAEEEFNIEKLQLVEAXXXXXXXXXXXXXX 60
           MNDGDVSKQI QMVRFIRQEAEEKA+EIS+SAEEEFNIEKLQLVEA              
Sbjct: 1   MNDGDVSKQIHQMVRFIRQEAEEKASEISLSAEEEFNIEKLQLVEAEKKKIRQEYERKER 60

Query: 61  XXXXXXXXXXSMQLNASRIKVLQAQDDLVNTMKEAASKELLNVSHHRNILDALSHHHHVY 120
                     SMQLNASRI VLQAQDD+VN+MKE  +KELLNVS H  + D L   +H Y
Sbjct: 61  QVEIRKKIEYSMQLNASRINVLQAQDDIVNSMKEVTAKELLNVSRHHLVEDILHVGNHEY 120

Query: 121 KHLLKDLIIQSLLRLKEPSVLLRCREHDLHLVEHVLDSAAEEYAEKANVPQPEIIVDKHV 180
           ++LLK LI+Q               +HD+HLVEHVLD+AA+EYAEKA V  PEIIVD  V
Sbjct: 121 RNLLKGLIVQ---------------KHDVHLVEHVLDAAAQEYAEKAGVYPPEIIVDHSV 165

Query: 181 YLPPAPSHHNTHDPYCSGGVVLASRDGKIVIENTLDARLDVLFRKKLPAIRKQLFGQVAA 240
           YLPPAP HHNTH+PYCSGGVVLASRDGKIV ENTLDARLDV+FRKKLP IRKQLFGQ AA
Sbjct: 166 YLPPAPKHHNTHEPYCSGGVVLASRDGKIVCENTLDARLDVVFRKKLPEIRKQLFGQAAA 225


>Medtr4g073800.1 | archaeal/vacuolar-type H+-ATPase subunit E | HC |
           chr4:28027609-28024453 | 20130731
          Length = 258

 Score =  272 bits (696), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 141/230 (61%), Positives = 167/230 (72%), Gaps = 12/230 (5%)

Query: 1   MNDGDVSKQIQQMVRFIRQEAEEKANEISVSAEEEFNIEKLQLVEAXXXXXXXXXXXXXX 60
           M D DVSKQIQQM+RFIRQEAEEKANEISV+AEEEFNIEKLQL+EA              
Sbjct: 1   MKDADVSKQIQQMIRFIRQEAEEKANEISVAAEEEFNIEKLQLLEAEKRKIRQEYERKAK 60

Query: 61  XXXXXXXXXXSMQLNASRIKVLQAQDDLVNTMKEAASKELLNVSHHRNILDALSHHHHVY 120
                     SMQLNASRIKVLQAQD++VN+MK+ A K LL++S+             VY
Sbjct: 61  QIDVRRKIEYSMQLNASRIKVLQAQDEVVNSMKDDAKKALLHISND----------EQVY 110

Query: 121 KHLLKDLIIQSLLRLKEPSVLLRCREHDLHLVEHVLDSAAEEYAEKANVPQPEIIVDKHV 180
           K L+K++I+Q LLRL+EPSVLLRCRE D  LVE +L+   +EY+EKANV  P+I +D  V
Sbjct: 111 KKLIKEIIVQGLLRLREPSVLLRCREGDSKLVESLLEDVKKEYSEKANVQPPKIALDDRV 170

Query: 181 YLPPAPSHHN--THDPYCSGGVVLASRDGKIVIENTLDARLDVLFRKKLP 228
           YLPP P   N  TH+P+CSGGVVLAS DGKIV+ENTLDARLDV+FR+KLP
Sbjct: 171 YLPPQPKDGNVDTHEPFCSGGVVLASEDGKIVLENTLDARLDVIFRQKLP 220


>Medtr8g099190.3 | archaeal/vacuolar-type H+-ATPase subunit E | HC |
           chr8:41719984-41717613 | 20130731
          Length = 217

 Score =  263 bits (672), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 135/196 (68%), Positives = 152/196 (77%)

Query: 1   MNDGDVSKQIQQMVRFIRQEAEEKANEISVSAEEEFNIEKLQLVEAXXXXXXXXXXXXXX 60
           MNDGDVSKQI QMVRFIRQEAEEKA+EIS+SAEEEFNIEKLQLVEA              
Sbjct: 1   MNDGDVSKQIHQMVRFIRQEAEEKASEISLSAEEEFNIEKLQLVEAEKKKIRQEYERKER 60

Query: 61  XXXXXXXXXXSMQLNASRIKVLQAQDDLVNTMKEAASKELLNVSHHRNILDALSHHHHVY 120
                     SMQLNASRI VLQAQDD+VN+MKE  +KELLNVS H  + D L   +H Y
Sbjct: 61  QVEIRKKIEYSMQLNASRINVLQAQDDIVNSMKEVTAKELLNVSRHHLVEDILHVGNHEY 120

Query: 121 KHLLKDLIIQSLLRLKEPSVLLRCREHDLHLVEHVLDSAAEEYAEKANVPQPEIIVDKHV 180
           ++LLK LI+QSLLRL+EPSVLLRC++HD+HLVEHVLD+AA+EYAEKA V  PEIIVD  V
Sbjct: 121 RNLLKGLIVQSLLRLREPSVLLRCQKHDVHLVEHVLDAAAQEYAEKAGVYPPEIIVDHSV 180

Query: 181 YLPPAPSHHNTHDPYC 196
           YLPPAP HHNTH+PYC
Sbjct: 181 YLPPAPKHHNTHEPYC 196