Miyakogusa Predicted Gene

Lj4g3v2990180.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2990180.1 Non Characterized Hit- tr|D0N933|D0N933_PHYIT
Putative uncharacterized protein OS=Phytophthora infes,30.1,0.0004,
,CUFF.51962.1
         (202 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g098950.1 | transducin/WD-like repeat-protein | HC | chr8:...   372   e-103
Medtr8g098950.2 | transducin/WD-like repeat-protein | HC | chr8:...   160   1e-39

>Medtr8g098950.1 | transducin/WD-like repeat-protein | HC |
            chr8:41470868-41460058 | 20130731
          Length = 1442

 Score =  372 bits (955), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 178/201 (88%), Positives = 191/201 (95%)

Query: 2    TTLKEVVRVYPMVAVNESWTRLAVGDVIGEVSNASIRVYDMQSVTMIKVLDASGPPGLPS 61
            TT KEVVRVYPMVAVNESWTRLAVGDVIGEV+NASIRVYDMQSVTMIKVLDASGPPGLPS
Sbjct: 1242 TTFKEVVRVYPMVAVNESWTRLAVGDVIGEVNNASIRVYDMQSVTMIKVLDASGPPGLPS 1301

Query: 62   LLTAATSGTVLATAISALSFSPDGEGLVAFSEHGLMIRWWSLGSIWWEKLSRNFVPVQCT 121
            LLTA  SG VL TAISALSFSPDGEGLVAFSEHGLMIRWWSLGS W+EKLSRNFVPVQCT
Sbjct: 1302 LLTATASGAVLTTAISALSFSPDGEGLVAFSEHGLMIRWWSLGSFWYEKLSRNFVPVQCT 1361

Query: 122  KLIFVPPWEGFSPNSSRSSIMANILETDKQLNFEDDSRDSNHGDSLKQLLHNLDLSYRLE 181
            KLIFVPPWEGFSPNSSRSSIMA+IL+T+KQLN +++++DSNH DSLKQLLHNLDLSYRLE
Sbjct: 1362 KLIFVPPWEGFSPNSSRSSIMASILDTEKQLNLQNNAKDSNHVDSLKQLLHNLDLSYRLE 1421

Query: 182  WVSDRKVFLTRHSHELGTFQL 202
            WV++RKV LTRH +ELGTFQL
Sbjct: 1422 WVAERKVLLTRHGNELGTFQL 1442


>Medtr8g098950.2 | transducin/WD-like repeat-protein | HC |
            chr8:41470960-41462163 | 20130731
          Length = 1391

 Score =  160 bits (404), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 81/90 (90%), Positives = 82/90 (91%)

Query: 2    TTLKEVVRVYPMVAVNESWTRLAVGDVIGEVSNASIRVYDMQSVTMIKVLDASGPPGLPS 61
            TT KEVVRVYPMVAVNESWTRLAVGDVIGEV+NASIRVYDMQSVTMIKVLDASGPPGLPS
Sbjct: 1275 TTFKEVVRVYPMVAVNESWTRLAVGDVIGEVNNASIRVYDMQSVTMIKVLDASGPPGLPS 1334

Query: 62   LLTAATSGTVLATAISALSFSPDGEGLVAF 91
            LLTA  SG VL TAISALSFSPDGE L  F
Sbjct: 1335 LLTATASGAVLTTAISALSFSPDGEVLKNF 1364