Miyakogusa Predicted Gene
- Lj4g3v2489550.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v2489550.1 tr|G7KG11|G7KG11_MEDTR DEAD-box ATP-dependent RNA
helicase OS=Medicago truncatula GN=MTR_5g077690 PE,82.49,0,DEAD-like
helicases superfamily,Helicase, superfamily 1/2, ATP-binding domain;
helicase superfamily ,CUFF.51059.1
(512 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr5g077690.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 867 0.0
Medtr8g079462.1 | DEAD-box ATP-dependent RNA helicase-like prote... 514 e-146
Medtr6g082080.1 | DEAD-box ATP-dependent RNA helicase-like prote... 171 2e-42
Medtr6g082080.2 | DEAD-box ATP-dependent RNA helicase-like prote... 171 2e-42
Medtr7g056830.1 | DEAD-box ATP-dependent RNA helicase-like prote... 169 7e-42
Medtr3g049990.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 157 2e-38
Medtr5g090120.1 | DEAD-box ATP-dependent RNA helicase-like prote... 156 5e-38
Medtr2g041140.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 149 5e-36
Medtr3g449250.2 | DEAD-box ATP-dependent RNA helicase-like prote... 148 1e-35
Medtr3g449250.1 | DEAD-box ATP-dependent RNA helicase-like prote... 148 1e-35
Medtr7g057250.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 142 7e-34
Medtr2g066050.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 139 9e-33
Medtr6g056080.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 132 6e-31
Medtr6g005320.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 126 5e-29
Medtr6g005320.3 | DEAD-box ATP-dependent RNA helicase | HC | chr... 126 5e-29
Medtr6g005320.2 | DEAD-box ATP-dependent RNA helicase | HC | chr... 126 5e-29
Medtr1g102410.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 125 9e-29
Medtr8g079452.1 | helicase family carboxy-terminal domain protei... 125 1e-28
Medtr4g079320.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 125 1e-28
Medtr4g134170.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 125 1e-28
Medtr2g032630.1 | DEAD-box ATP-dependent RNA helicase-like prote... 122 9e-28
Medtr2g032630.2 | DEAD-box ATP-dependent RNA helicase-like prote... 122 9e-28
Medtr3g083690.1 | DEAD-box ATP-dependent RNA helicase-like prote... 120 4e-27
Medtr3g083690.2 | DEAD-box ATP-dependent RNA helicase-like prote... 120 4e-27
Medtr3g467550.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 117 3e-26
Medtr3g467550.2 | DEAD-box ATP-dependent RNA helicase | HC | chr... 117 3e-26
Medtr2g055850.1 | DEAD-box ATP-dependent RNA helicase-like prote... 117 4e-26
Medtr1g054630.1 | DEAD-box ATP-dependent RNA helicase-like prote... 116 5e-26
Medtr4g105100.1 | DEAD-box ATP-dependent RNA helicase-like prote... 114 2e-25
Medtr2g100230.1 | DEAD-box ATP-dependent RNA helicase-like prote... 114 2e-25
Medtr4g059460.1 | DEAD-box ATP-dependent RNA helicase-like prote... 114 3e-25
Medtr2g043360.1 | DEAD-box ATP-dependent RNA helicase-like prote... 114 3e-25
Medtr4g114120.1 | DEAD-box ATP-dependent RNA helicase-like prote... 114 3e-25
Medtr6g005550.1 | DEAD-box ATP-dependent RNA helicase-like prote... 113 3e-25
Medtr6g005550.2 | DEAD-box ATP-dependent RNA helicase-like prote... 113 3e-25
Medtr4g112340.1 | DEAD-box ATP-dependent RNA helicase-like prote... 113 6e-25
Medtr6g033070.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 112 6e-25
Medtr7g076820.1 | DEAD-box ATP-dependent RNA helicase-like prote... 112 1e-24
Medtr7g076830.1 | DEAD-box ATP-dependent RNA helicase-like prote... 111 1e-24
Medtr7g076800.1 | DEAD-box ATP-dependent RNA helicase-like prote... 111 2e-24
Medtr3g071620.1 | DEAD-box ATP-dependent RNA helicase-like prote... 110 5e-24
Medtr5g069330.1 | DEAD-box ATP-dependent RNA helicase | LC | chr... 107 4e-23
Medtr5g069330.4 | DEAD-box ATP-dependent RNA helicase | LC | chr... 107 4e-23
Medtr5g069330.2 | DEAD-box ATP-dependent RNA helicase | LC | chr... 107 4e-23
Medtr5g069330.3 | DEAD-box ATP-dependent RNA helicase | LC | chr... 106 4e-23
Medtr5g069330.5 | DEAD-box ATP-dependent RNA helicase | LC | chr... 106 4e-23
Medtr2g039960.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 106 7e-23
Medtr7g109720.1 | DEAD-box ATP-dependent RNA helicase-like prote... 105 8e-23
Medtr7g100820.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 105 1e-22
Medtr2g007000.4 | DEAD-box RNA helicase family protein | HC | ch... 105 1e-22
Medtr2g007000.8 | DEAD-box RNA helicase family protein | HC | ch... 105 1e-22
Medtr2g007000.6 | DEAD-box RNA helicase family protein | HC | ch... 105 1e-22
Medtr2g007000.2 | DEAD-box RNA helicase family protein | HC | ch... 105 1e-22
Medtr2g007000.1 | DEAD-box RNA helicase family protein | HC | ch... 105 1e-22
Medtr2g007000.5 | DEAD-box RNA helicase family protein | HC | ch... 105 1e-22
Medtr2g007000.7 | DEAD-box RNA helicase family protein | HC | ch... 105 1e-22
Medtr2g007000.3 | DEAD-box RNA helicase family protein | HC | ch... 105 1e-22
Medtr2g007000.9 | DEAD-box RNA helicase family protein | HC | ch... 105 1e-22
Medtr2g007000.10 | DEAD-box RNA helicase family protein | HC | c... 105 1e-22
Medtr2g099620.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 104 3e-22
Medtr2g099620.2 | DEAD-box ATP-dependent RNA helicase | HC | chr... 103 3e-22
Medtr2g063080.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 103 6e-22
Medtr1g095810.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 102 6e-22
Medtr8g018400.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 102 6e-22
Medtr2g438110.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 102 7e-22
Medtr1g083130.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 102 1e-21
Medtr1g026830.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 100 3e-21
Medtr4g068990.1 | DEAD-box ATP-dependent RNA helicase-like prote... 100 3e-21
Medtr5g092560.1 | DEAD-box ATP-dependent RNA helicase-like prote... 100 5e-21
Medtr4g125970.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 99 1e-20
Medtr4g125970.2 | DEAD-box ATP-dependent RNA helicase | HC | chr... 99 1e-20
Medtr3g107420.2 | DEAD-box ATP-dependent RNA helicase-like prote... 97 3e-20
Medtr3g107420.1 | DEAD-box ATP-dependent RNA helicase-like prote... 97 3e-20
Medtr6g039840.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 97 3e-20
Medtr1g012420.1 | DEAD-box ATP-dependent RNA helicase-like prote... 97 5e-20
Medtr4g112320.1 | DEAD-box ATP-dependent RNA helicase-like prote... 96 1e-19
Medtr5g027840.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 94 2e-19
Medtr4g010565.1 | DEAD-box ATP-dependent RNA helicase-like prote... 92 2e-18
Medtr8g032230.1 | DEAD-box helicase family protein | HC | chr8:1... 90 6e-18
Medtr8g097000.1 | DEAD-box ATP-dependent RNA helicase family pro... 89 7e-18
Medtr8g027770.1 | DEAD-box ATP-dependent RNA helicase family pro... 89 1e-17
Medtr3g467550.3 | DEAD-box ATP-dependent RNA helicase | HC | chr... 88 2e-17
Medtr2g043360.2 | DEAD-box ATP-dependent RNA helicase-like prote... 88 2e-17
Medtr4g131750.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 87 5e-17
Medtr8g027780.1 | DEAD-box ATP-dependent RNA helicase family pro... 86 1e-16
Medtr8g027775.1 | DEAD-box ATP-dependent RNA helicase family pro... 85 1e-16
Medtr1g061970.1 | DEAD-box ATP-dependent RNA helicase-like prote... 82 2e-15
Medtr4g049910.1 | DEAD-box ATP-dependent RNA helicase-like prote... 82 2e-15
Medtr1g046570.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 80 4e-15
Medtr4g459350.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 79 1e-14
Medtr6g039840.2 | DEAD-box ATP-dependent RNA helicase | HC | chr... 76 6e-14
Medtr3g118120.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 73 5e-13
Medtr4g105100.5 | DEAD-box ATP-dependent RNA helicase-like prote... 70 6e-12
Medtr4g105100.3 | DEAD-box ATP-dependent RNA helicase-like prote... 70 6e-12
Medtr4g105100.4 | DEAD-box ATP-dependent RNA helicase-like prote... 70 6e-12
Medtr4g105100.2 | DEAD-box ATP-dependent RNA helicase-like prote... 70 6e-12
Medtr1g009617.1 | DEAD-box ATP-dependent RNA helicase-like prote... 67 6e-11
Medtr0915s0010.1 | DEAD-box ATP-dependent RNA helicase | HC | sc... 64 4e-10
Medtr8g018370.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 61 2e-09
Medtr1g022305.1 | DEAD-box ATP-dependent RNA helicase-like prote... 61 3e-09
Medtr0427s0010.1 | DEAD-box RNA helicase family protein | HC | s... 59 1e-08
Medtr8g062720.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 59 1e-08
Medtr8g042690.1 | DEAD-box ATP-dependent RNA helicase-like prote... 56 1e-07
Medtr4g068990.2 | DEAD-box ATP-dependent RNA helicase-like prote... 56 1e-07
Medtr5g092560.2 | DEAD-box ATP-dependent RNA helicase-like prote... 55 2e-07
Medtr4g077370.1 | DEAD-box helicase family protein | LC | chr4:2... 54 3e-07
>Medtr5g077690.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr5:33157541-33150855 | 20130731
Length = 497
Score = 867 bits (2241), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/497 (83%), Positives = 455/497 (91%)
Query: 1 MAEEKQRSIPVLPWMRDPIDVTLCQQLPLDSIPLLHPKLKSALESMGISSLFPVQLAVWQ 60
M EEKQ+SIP LPWMRDP+DVTL QQLPL S+P LHPKLKSALE MGIS+LFPVQ+AVW
Sbjct: 1 MGEEKQQSIPALPWMRDPVDVTLTQQLPLHSVPSLHPKLKSALEDMGISNLFPVQVAVWH 60
Query: 61 ETVGPGNFDRDLCVNSPTGSGKTLAYALPIVQMLSTRVAKCLRALVVVPTRDLAFQVKRV 120
ETVGPGNF+RD+CVNSPTGSGKTLAYALP+VQMLS RV KCLRALVVVPTRDLA QVK+V
Sbjct: 61 ETVGPGNFERDICVNSPTGSGKTLAYALPLVQMLSGRVTKCLRALVVVPTRDLALQVKQV 120
Query: 121 FDGVASPLGLRVGLAVGQSSVADEISELVHVPAREAGSCYDPQHALFVRFESKVDILVAT 180
FD VASPLGLRVGLAVGQSS+ADEISELV +PAR+ G+CYDP RF+SKVDILVAT
Sbjct: 121 FDAVASPLGLRVGLAVGQSSLADEISELVEMPARDIGTCYDPHCISLPRFQSKVDILVAT 180
Query: 181 PGRLMDHINTTKGFTLEHLHYLVVDETDRLLREAYQSWLPTVLELAQSNDDSFSQPADSF 240
PGRLMDHINTT GFTLEHL+YLVVDETDRLLREAYQSWLPTVLEL QSNDD FS P+ SF
Sbjct: 181 PGRLMDHINTTIGFTLEHLYYLVVDETDRLLREAYQSWLPTVLELIQSNDDGFSLPSASF 240
Query: 241 FPCSVGALRTRRRCGVERGFKDKPYPRLAKMVLSATITQDPGKLVQLNLHLPLFLRAGQM 300
FPCS ALRTRRRCGVERGFKDKPYPRLAKMVLSAT+TQDPG+L+QLNLH PL L+AGQM
Sbjct: 241 FPCSASALRTRRRCGVERGFKDKPYPRLAKMVLSATLTQDPGRLIQLNLHHPLLLKAGQM 300
Query: 301 RYRLPENLESYKLICETKVKPLYLVALLKSLGGEKCIVFTKSVESTHRLCKLLNCFEDLQ 360
RYRLPENLESYKLICE KVKPLYL+ALLKSLG EKC+VFTKSV+STHRLC+LLNCFEDL+
Sbjct: 301 RYRLPENLESYKLICEKKVKPLYLIALLKSLGEEKCLVFTKSVDSTHRLCQLLNCFEDLR 360
Query: 361 IDMKEYSGLQHQCVRSKTLTAFRKGEFQVLVSSDAMTRGMDVEGVRNVINYDMPKYIKTY 420
ID+KEYS LQHQ VRSKTL FRKG FQVL+SSDA+TRGMDVEGVRNVINYD+PK+IKT+
Sbjct: 361 IDIKEYSSLQHQRVRSKTLNEFRKGVFQVLLSSDALTRGMDVEGVRNVINYDVPKFIKTH 420
Query: 421 VHRAGRTARAGQTGRCFTLMSKDEVRRFKKLMQKAEAGSCEEHILPSSLIDALHTTYQSA 480
VHRAGRTARAGQTGRCFTLMS+DEVRRFKKL+ KAE GSC +HI+PSS I+AL+TTY+SA
Sbjct: 421 VHRAGRTARAGQTGRCFTLMSEDEVRRFKKLIGKAEGGSCLDHIVPSSQIEALNTTYESA 480
Query: 481 LEKFKEILSERRKKPKE 497
L K+KEI+S+ RKKPK
Sbjct: 481 LTKYKEIISKTRKKPKN 497
>Medtr8g079462.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr8:34021263-34013553 | 20130731
Length = 313
Score = 514 bits (1324), Expect = e-146, Method: Compositional matrix adjust.
Identities = 246/294 (83%), Positives = 271/294 (92%)
Query: 203 VVDETDRLLREAYQSWLPTVLELAQSNDDSFSQPADSFFPCSVGALRTRRRCGVERGFKD 262
VVDETDRLLREAYQSWLPTVLEL QSNDD FS P+ SFFPCS ALRTRRRCGVERGFKD
Sbjct: 19 VVDETDRLLREAYQSWLPTVLELIQSNDDGFSLPSASFFPCSASALRTRRRCGVERGFKD 78
Query: 263 KPYPRLAKMVLSATITQDPGKLVQLNLHLPLFLRAGQMRYRLPENLESYKLICETKVKPL 322
KPYPRLAKMVLSAT+TQDPG+L+QLNLH PL L+AGQMRYRLPENLESYKLICE KVKPL
Sbjct: 79 KPYPRLAKMVLSATLTQDPGRLIQLNLHHPLLLKAGQMRYRLPENLESYKLICEKKVKPL 138
Query: 323 YLVALLKSLGGEKCIVFTKSVESTHRLCKLLNCFEDLQIDMKEYSGLQHQCVRSKTLTAF 382
YL+ALLKSLG EKC+VFTKSV+STHRLC+LLNCFEDL+ID+KEYS LQHQ VRSKTL F
Sbjct: 139 YLIALLKSLGEEKCLVFTKSVDSTHRLCQLLNCFEDLRIDIKEYSSLQHQRVRSKTLNEF 198
Query: 383 RKGEFQVLVSSDAMTRGMDVEGVRNVINYDMPKYIKTYVHRAGRTARAGQTGRCFTLMSK 442
RKG FQVL+SSDA+TR MDVEGVRNVINYD+PK+IKTYVHRAGRTARA QTGRCFTLMS+
Sbjct: 199 RKGVFQVLLSSDALTREMDVEGVRNVINYDVPKFIKTYVHRAGRTARAVQTGRCFTLMSE 258
Query: 443 DEVRRFKKLMQKAEAGSCEEHILPSSLIDALHTTYQSALEKFKEILSERRKKPK 496
DEVRRFKKL+ KAE GSC +HI+PSS I+AL+TTY+SAL K+KEI+S+ RKKPK
Sbjct: 259 DEVRRFKKLIGKAEGGSCLDHIVPSSQIEALNTTYESALTKYKEIISKTRKKPK 312
>Medtr6g082080.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr6:30641167-30650711 | 20130731
Length = 438
Score = 171 bits (432), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 122/411 (29%), Positives = 193/411 (46%), Gaps = 69/411 (16%)
Query: 39 LKSALESMGISSLFPVQLAVWQETVGPGNFDRDLCVNSPTGSGKTLAYALPIVQ-MLSTR 97
L A E MG + +Q+ E + P +DL + TGSGKT A+ALPI+ +L
Sbjct: 20 LVEACEKMGWKNPLKIQI----EAIPPALEGKDLIGLAETGSGKTGAFALPILHALLEAP 75
Query: 98 VAKCLRALVVVPTRDLAFQVKRVFDGVASPLGLRVGLAVGQSSVADEISELVHVPAREAG 157
A V+ PTR+LA Q+ F+ + S +G++ + VG + + ++ +P
Sbjct: 76 RPNHFFACVMSPTRELAIQISEQFEALGSEIGVKCAVLVGGIDMVQQSVKIAKLP----- 130
Query: 158 SCYDPQHALFVRFESKVDILVATPGRLMDHINTTKGFTLEHLHYLVVDETDRLLREAYQS 217
I+V TPGR++DH+ TKGF+L L YLV+DE DRLL E ++
Sbjct: 131 -----------------HIIVGTPGRVLDHLKNTKGFSLARLKYLVLDEADRLLNEDFEE 173
Query: 218 WLPTVLELAQSNDDSFSQPADSFFPCSVGALRTRRRCGVERGFKDKPYPRLAKMVLSATI 277
L +L G + RR + SAT+
Sbjct: 174 SLNEIL----------------------GMIPRERRT----------------FLFSATM 195
Query: 278 TQDPGKLVQLNLHLPLFLRAGQMRYRLPENLESYKLICETKVKPLYLVALLKSLGGEKCI 337
T+ KL ++ L P+ + +Y + L+ K K YLV +L + G +
Sbjct: 196 TKKVEKLQRVCLRNPVKIETSS-KYSTVDTLKQQYRFLPAKHKDCYLVYILTEMAGSTSM 254
Query: 338 VFTKSVESTHRLCKLLNCFEDLQIDMKEYSGLQHQCVRSKTLTAFRKGEFQVLVSSDAMT 397
VFT++ +ST L +L +L + +G Q R L F+ G+ +L+ +D +
Sbjct: 255 VFTRTCDSTRLLALIL---RNLGLKAIPINGHMSQPKRLGALNKFKSGDCNILLCTDVAS 311
Query: 398 RGMDVEGVRNVINYDMPKYIKTYVHRAGRTARAGQTGRCFTLMSKDEVRRF 448
RG+D+ V VINYD+P K Y+HR GRTARAG++G +L+++ E+ +
Sbjct: 312 RGLDIPAVDMVINYDIPTNSKDYIHRVGRTARAGRSGVAISLVNQYELEWY 362
>Medtr6g082080.2 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr6:30641166-30650890 | 20130731
Length = 438
Score = 171 bits (432), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 122/411 (29%), Positives = 193/411 (46%), Gaps = 69/411 (16%)
Query: 39 LKSALESMGISSLFPVQLAVWQETVGPGNFDRDLCVNSPTGSGKTLAYALPIVQ-MLSTR 97
L A E MG + +Q+ E + P +DL + TGSGKT A+ALPI+ +L
Sbjct: 20 LVEACEKMGWKNPLKIQI----EAIPPALEGKDLIGLAETGSGKTGAFALPILHALLEAP 75
Query: 98 VAKCLRALVVVPTRDLAFQVKRVFDGVASPLGLRVGLAVGQSSVADEISELVHVPAREAG 157
A V+ PTR+LA Q+ F+ + S +G++ + VG + + ++ +P
Sbjct: 76 RPNHFFACVMSPTRELAIQISEQFEALGSEIGVKCAVLVGGIDMVQQSVKIAKLP----- 130
Query: 158 SCYDPQHALFVRFESKVDILVATPGRLMDHINTTKGFTLEHLHYLVVDETDRLLREAYQS 217
I+V TPGR++DH+ TKGF+L L YLV+DE DRLL E ++
Sbjct: 131 -----------------HIIVGTPGRVLDHLKNTKGFSLARLKYLVLDEADRLLNEDFEE 173
Query: 218 WLPTVLELAQSNDDSFSQPADSFFPCSVGALRTRRRCGVERGFKDKPYPRLAKMVLSATI 277
L +L G + RR + SAT+
Sbjct: 174 SLNEIL----------------------GMIPRERRT----------------FLFSATM 195
Query: 278 TQDPGKLVQLNLHLPLFLRAGQMRYRLPENLESYKLICETKVKPLYLVALLKSLGGEKCI 337
T+ KL ++ L P+ + +Y + L+ K K YLV +L + G +
Sbjct: 196 TKKVEKLQRVCLRNPVKIETSS-KYSTVDTLKQQYRFLPAKHKDCYLVYILTEMAGSTSM 254
Query: 338 VFTKSVESTHRLCKLLNCFEDLQIDMKEYSGLQHQCVRSKTLTAFRKGEFQVLVSSDAMT 397
VFT++ +ST L +L +L + +G Q R L F+ G+ +L+ +D +
Sbjct: 255 VFTRTCDSTRLLALIL---RNLGLKAIPINGHMSQPKRLGALNKFKSGDCNILLCTDVAS 311
Query: 398 RGMDVEGVRNVINYDMPKYIKTYVHRAGRTARAGQTGRCFTLMSKDEVRRF 448
RG+D+ V VINYD+P K Y+HR GRTARAG++G +L+++ E+ +
Sbjct: 312 RGLDIPAVDMVINYDIPTNSKDYIHRVGRTARAGRSGVAISLVNQYELEWY 362
>Medtr7g056830.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr7:20527189-20518464 | 20130731
Length = 438
Score = 169 bits (428), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 121/411 (29%), Positives = 192/411 (46%), Gaps = 69/411 (16%)
Query: 39 LKSALESMGISSLFPVQLAVWQETVGPGNFDRDLCVNSPTGSGKTLAYALPIVQ-MLSTR 97
L A E +G + +Q+ E + P +DL + TGSGKT A+ALPI+ +L
Sbjct: 20 LVEACEKVGWKTPLEIQI----EAIPPALEGKDLIGLAKTGSGKTGAFALPILHALLEAP 75
Query: 98 VAKCLRALVVVPTRDLAFQVKRVFDGVASPLGLRVGLAVGQSSVADEISELVHVPAREAG 157
A V+ PTR+LA Q+ F+ + S +G++ + VG + + ++ +P
Sbjct: 76 RPNHFFACVMSPTRELAIQISEQFEALGSEIGVKCAVLVGGIDMVQQSVKIAKLP----- 130
Query: 158 SCYDPQHALFVRFESKVDILVATPGRLMDHINTTKGFTLEHLHYLVVDETDRLLREAYQS 217
I+V TPGR++DH+ TKGF+L L YLV+DE DRLL E ++
Sbjct: 131 -----------------HIIVGTPGRVLDHLKNTKGFSLARLKYLVLDEADRLLNEDFEE 173
Query: 218 WLPTVLELAQSNDDSFSQPADSFFPCSVGALRTRRRCGVERGFKDKPYPRLAKMVLSATI 277
L +L G + RR + SAT+
Sbjct: 174 SLNEIL----------------------GMIPRERRT----------------FLFSATM 195
Query: 278 TQDPGKLVQLNLHLPLFLRAGQMRYRLPENLESYKLICETKVKPLYLVALLKSLGGEKCI 337
T KL ++ L P+ + +Y + L+ K K YLV +L + G +
Sbjct: 196 TNKVEKLQRVCLRNPVKIETSS-KYSTVDTLKQQYRFLPAKHKDCYLVYILSEMAGSTSM 254
Query: 338 VFTKSVESTHRLCKLLNCFEDLQIDMKEYSGLQHQCVRSKTLTAFRKGEFQVLVSSDAMT 397
VFT++ +ST L +L +L + +G Q R L F+ G+ +L+ +D +
Sbjct: 255 VFTRTCDSTRLLALILR---NLGLKAIPINGHMSQPKRLGALNKFKSGDCNILLCTDVAS 311
Query: 398 RGMDVEGVRNVINYDMPKYIKTYVHRAGRTARAGQTGRCFTLMSKDEVRRF 448
RG+D+ V VINYD+P K Y+HR GRTARAG++G +L+++ E+ +
Sbjct: 312 RGLDIPAVDMVINYDIPTNSKDYIHRVGRTARAGRSGVAISLVNQYELEWY 362
>Medtr3g049990.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr3:19680414-19670656 | 20130731
Length = 760
Score = 157 bits (398), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 132/469 (28%), Positives = 213/469 (45%), Gaps = 79/469 (16%)
Query: 31 SIPLLHPKLKSALESMGISSLFPVQLAVWQETVGPGNFDRDLCVNSPTGSGKTLAYALPI 90
S PLL A E +G S P+Q A + RD+C ++ TGSGKT A+ALP
Sbjct: 159 SRPLLR-----ACEVLGYSKPTPIQAAC----IPLALTGRDICGSAITGSGKTAAFALPT 209
Query: 91 VQMLSTRVAK--CLRALVVVPTRDLAFQVKRVFDGVASPLGLRVGLAVGQSSVADEISEL 148
++ L R + +R L++ PTR+LA QV+ + ++ +R L VG S ++
Sbjct: 210 LERLLFRPKRVHAIRVLILTPTRELAAQVQSMIKSLSQFTDIRCCLIVGGLSTKEQ---- 265
Query: 149 VHVPAREAGSCYDPQHALFVRFESKVDILVATPGRLMDHINTTKGFTLEHLHYLVVDETD 208
V S+ DI+VATPGR++DH+ + L+ L L++DE D
Sbjct: 266 ------------------EVALRSRPDIVVATPGRMIDHLRNSMSVDLDDLSVLILDEAD 307
Query: 209 RLLREAYQSWLPTVLELAQSNDDSFSQPADSFFPCSVGALRTRRRCGVERGFKDKPYPRL 268
RLL + + + ++ R C +R
Sbjct: 308 RLLELGFSAEIQELV----------------------------RVCPKKR---------- 329
Query: 269 AKMVLSATITQDPGKLVQLNLHLPLFLRAGQMRYR---LPENLESYKLICETKVKPLYLV 325
M+ SAT+T++ L++L+L PL L A + R L E + + + E + + L
Sbjct: 330 QTMLFSATMTEEVDDLIKLSLSKPLRLSADPLAKRPASLTEEVVRLRRMREVNQEAVLLA 389
Query: 326 ALLKSLGGEKCIVFTKSVESTHRLCKLLNCFEDLQIDMKEYSGLQHQCVRSKTLTAFRKG 385
K+ K I+F+ + ++ HRL +++ L+ E G Q R L FRK
Sbjct: 390 MCSKTFTS-KVIIFSGTKQAAHRL-RIIFGLSGLK--AAELHGNLTQAQRLGALEEFRKQ 445
Query: 386 EFQVLVSSDAMTRGMDVEGVRNVINYDMPKYIKTYVHRAGRTARAGQTGRCFTLMSKDEV 445
+ LV++D RG+D+ GV+ VIN+ P+ + +YVHR GRTARAG+ G T ++ D
Sbjct: 446 QVDFLVATDVAARGLDIIGVQTVINFACPRDLTSYVHRVGRTARAGRAGSAVTFVT-DND 504
Query: 446 RRFKKLMQKAEAGSCEEHILPSSLIDALHTTYQSALEKFKEILSERRKK 494
R K + K + I+ I + ++ E+L E R++
Sbjct: 505 RSLLKAIAKRAGSKLKSRIVAEQSILKWSQVIEQMEDQISEVLQEEREE 553
>Medtr5g090120.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr5:39247084-39252313 | 20130731
Length = 590
Score = 156 bits (394), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 127/442 (28%), Positives = 205/442 (46%), Gaps = 89/442 (20%)
Query: 41 SALESMGISSLFPVQLAVWQETVGPGNFDRDLCVNSPTGSGKTLAYALPIVQMLSTRVAK 100
SALE GI+ LFP+Q AV + P RD+ + TG+GKTLA+ +PI+ + AK
Sbjct: 93 SALEKKGITKLFPIQRAVLE----PAMQGRDMIGRARTGTGKTLAFGIPIMDKIIQFNAK 148
Query: 101 CLR-----ALVVVPTRDLAFQVKRVFDGVASPLGLRVGLAVGQSSVADEISELVHVPARE 155
R ALV+ PTR+LA QV++ F A L G + ++ ++ +L
Sbjct: 149 HGRGKDPLALVLAPTRELAKQVEKEFYEAAP--NLDTICVYGGTPISQQMRQL------- 199
Query: 156 AGSCYDPQHALFVRFESKVDILVATPGRLMDHINTTKGFTLEHLHYLVVDETDRLLREAY 215
+ VDI V TPGR++D +N L+ + ++++DE D++L+ +
Sbjct: 200 ---------------DYGVDIAVGTPGRIIDLLNR-GALNLKEVQFVILDEADQMLQVGF 243
Query: 216 QSWLPTVLELAQSNDDSFSQPADSFFPCSVGALRTRRRCGVERGFKDKPYPRLAKMVLSA 275
Q + +LE R ER ++ SA
Sbjct: 244 QEDVEKILE----------------------------RLPAER----------QTLMFSA 265
Query: 276 TITQDPGKLVQLNLHLPLFLR-AGQMRYRLPENLESYKLICETKVKPLYLVALLKSLG-G 333
T+ +L + L PL + G +L + + Y ++ + VK +V L+K G
Sbjct: 266 TMPTWIKQLTRNYLKNPLTIDLVGDSDQKLADGISLYSILSDAYVKAGIIVPLIKEHAKG 325
Query: 334 EKCIVFTKSVES----THRLCKLLNCFEDLQIDMKEYSGLQHQCVRSKTLTAFRKGEFQV 389
KCIVFT++ +H + K + C E L D+ Q R +TL FR G F V
Sbjct: 326 GKCIVFTQTKRDADRISHGMSKSIPC-EALHGDIS-------QIQRERTLAGFRNGHFNV 377
Query: 390 LVSSDAMTRGMDVEGVRNVINYDMPKYIKTYVHRAGRTARAGQTGRCFTLMSKDEVRRFK 449
LV++D +RG+D+ V VI+Y++P + +VHR+GRT RAG+ G + ++D+ R +
Sbjct: 378 LVATDVASRGLDIPNVDLVIHYELPNNSEIFVHRSGRTGRAGKKGTAILVYTQDQSRTLR 437
Query: 450 KLMQKAEAGSCEEHILPSSLID 471
+ + C+ LP +D
Sbjct: 438 TIERDV---GCKFSELPKIAVD 456
>Medtr2g041140.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr2:18030127-18021965 | 20130731
Length = 747
Score = 149 bits (377), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 128/459 (27%), Positives = 208/459 (45%), Gaps = 75/459 (16%)
Query: 42 ALESMGISSLFPVQLAVWQETVGPGNFDRDLCVNSPTGSGKTLAYALPIVQMLSTRV--A 99
A E++G + P+Q A + RD+C ++ TGSGKT A+ALP ++ L R
Sbjct: 154 ACEALGYAKPTPIQAAC----IPLALTGRDICGSAITGSGKTAAFALPTLERLLFRPKGV 209
Query: 100 KCLRALVVVPTRDLAFQVKRVFDGVAS-PLGLRVGLAVGQSSVADEISELVHVPAREAGS 158
+R L++ PTR+LA QV + + +A +R L VG V +EA
Sbjct: 210 HAIRVLILTPTRELAVQVHSMIEELAKFTDNIRCCLIVGG----------VPTKGQEAA- 258
Query: 159 CYDPQHALFVRFESKVDILVATPGRLMDHINTTKGFTLEHLHYLVVDETDRLLREAYQSW 218
S+ DI+VATPGR++DH+ + L+ L L++DE DRLL + +
Sbjct: 259 -----------LRSRPDIVVATPGRMIDHLRNSMSVDLDDLAVLILDEADRLLELGFSAE 307
Query: 219 LPTVLELAQSNDDSFSQPADSFFPCSVGALRTRRRCGVERGFKDKPYPRLAKMVLSATIT 278
+ ++ R C +R M+ SAT+T
Sbjct: 308 IQELV----------------------------RVCPKKR----------QTMLFSATMT 329
Query: 279 QDPGKLVQLNLHLPLFLRAGQMRYR---LPENLESYKLICETKVKPLYLVALLKSLGGEK 335
++ L++L+L P+ L A R L E + + + E + + L K+ K
Sbjct: 330 EEVDDLIKLSLSKPVRLSADPSAKRPASLTEEVVRIRRMREVNHEAVLLAMCTKTFTS-K 388
Query: 336 CIVFTKSVESTHRLCKLLNCFEDLQIDMKEYSGLQHQCVRSKTLTAFRKGEFQVLVSSDA 395
I+F+ + ++ HRL +++ L+ E G Q R L FRK + LV++D
Sbjct: 389 VIIFSGTKQAAHRL-RIIFGLSGLK--AAELHGNLTQAQRLDALEQFRKQQVDFLVATDV 445
Query: 396 MTRGMDVEGVRNVINYDMPKYIKTYVHRAGRTARAGQTGRCFTLMSKDEVRRFKKLMQKA 455
RG+D+ GV+ VIN+ P+ + +YVHR GRTARAG+ G T ++ D R K + K
Sbjct: 446 AARGLDIIGVQTVINFACPRDLTSYVHRVGRTARAGRAGSAVTFVT-DSDRSLLKAIAKR 504
Query: 456 EAGSCEEHILPSSLIDALHTTYQSALEKFKEILSERRKK 494
+ I+ I + + E+L E+R++
Sbjct: 505 AGSKLKSRIVAEQAILKWSQVIEQMEYQISEVLQEKREE 543
>Medtr3g449250.2 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr3:16688391-16681206 | 20130731
Length = 558
Score = 148 bits (374), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 120/420 (28%), Positives = 192/420 (45%), Gaps = 82/420 (19%)
Query: 41 SALESMGISSLFPVQLAVWQETVGPGNFDRDLCVNSPTGSGKTLAYALPIVQMLSTRVAK 100
+AL GI+ LFP+Q AV + P RD+ + TG+GKTLA+ +PI+ + AK
Sbjct: 102 NALGKKGIAKLFPIQRAVLE----PAMQGRDMIGRARTGTGKTLAFGIPILDKIIKFNAK 157
Query: 101 CLR-----ALVVVPTRDLAFQVKRVFDGVASPLGLRVGLAVGQSSVADEISELVHVPARE 155
+ ALV+ PTR+LA QV++ F A P E
Sbjct: 158 NGKRRDPLALVLAPTRELARQVEKEFKDAA--------------------------PNLE 191
Query: 156 AGSCYD--PQHALFVRFESKVDILVATPGRLMDHINTTKGFTLEHLHYLVVDETDRLLRE 213
S Y P + S VDI+V TPGR++D + L+ ++Y+V+DE D++L+
Sbjct: 192 IISLYGGMPIQQQISKLGSGVDIVVGTPGRVIDLLKRGS-LKLKDVNYVVLDEADQMLQV 250
Query: 214 AYQSWLPTVLELAQSNDDSFSQPADSFFPCSVGALRTRRRCGVERGFKDKPYPRLAKMVL 273
+Q + T+L+ L ++R+ ++
Sbjct: 251 GFQEAVETILQ----------------------KLPSKRQT----------------LMF 272
Query: 274 SATITQDPGKLVQLNLHLPLFLR-AGQMRYRLPENLESYKLICETKVKPLYLVALL-KSL 331
SAT+ L + L+ PL + G +L + + Y + K LV L+ +
Sbjct: 273 SATMPSWIKNLTRNYLNKPLTIDLVGDSDQKLADGISLYSIASNAYSKAGILVPLITEHA 332
Query: 332 GGEKCIVFTKSVESTHRLCKLLNCFEDLQIDMKEYSGLQHQCVRSKTLTAFRKGEFQVLV 391
G KCIVFT++ RL ++ I + G Q R +TLT FR F VLV
Sbjct: 333 KGGKCIVFTQTKRDADRLSHIMAK----SIKCEALHGDISQTQRERTLTGFRNSYFNVLV 388
Query: 392 SSDAMTRGMDVEGVRNVINYDMPKYIKTYVHRAGRTARAGQTGRCFTLMSKDEVRRFKKL 451
++D +RG+D+ V VI+Y++P + +VHR+GRT RAG+ G + ++++ R K +
Sbjct: 389 ATDVASRGLDIPNVDLVIHYELPNNSEIFVHRSGRTGRAGKKGTAILVHTENQSRDVKTI 448
>Medtr3g449250.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr3:16688386-16681429 | 20130731
Length = 579
Score = 148 bits (373), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 120/420 (28%), Positives = 192/420 (45%), Gaps = 82/420 (19%)
Query: 41 SALESMGISSLFPVQLAVWQETVGPGNFDRDLCVNSPTGSGKTLAYALPIVQMLSTRVAK 100
+AL GI+ LFP+Q AV + P RD+ + TG+GKTLA+ +PI+ + AK
Sbjct: 102 NALGKKGIAKLFPIQRAVLE----PAMQGRDMIGRARTGTGKTLAFGIPILDKIIKFNAK 157
Query: 101 CLR-----ALVVVPTRDLAFQVKRVFDGVASPLGLRVGLAVGQSSVADEISELVHVPARE 155
+ ALV+ PTR+LA QV++ F A P E
Sbjct: 158 NGKRRDPLALVLAPTRELARQVEKEFKDAA--------------------------PNLE 191
Query: 156 AGSCYD--PQHALFVRFESKVDILVATPGRLMDHINTTKGFTLEHLHYLVVDETDRLLRE 213
S Y P + S VDI+V TPGR++D + L+ ++Y+V+DE D++L+
Sbjct: 192 IISLYGGMPIQQQISKLGSGVDIVVGTPGRVIDLLKRGS-LKLKDVNYVVLDEADQMLQV 250
Query: 214 AYQSWLPTVLELAQSNDDSFSQPADSFFPCSVGALRTRRRCGVERGFKDKPYPRLAKMVL 273
+Q + T+L+ L ++R+ ++
Sbjct: 251 GFQEAVETILQ----------------------KLPSKRQT----------------LMF 272
Query: 274 SATITQDPGKLVQLNLHLPLFLR-AGQMRYRLPENLESYKLICETKVKPLYLVALL-KSL 331
SAT+ L + L+ PL + G +L + + Y + K LV L+ +
Sbjct: 273 SATMPSWIKNLTRNYLNKPLTIDLVGDSDQKLADGISLYSIASNAYSKAGILVPLITEHA 332
Query: 332 GGEKCIVFTKSVESTHRLCKLLNCFEDLQIDMKEYSGLQHQCVRSKTLTAFRKGEFQVLV 391
G KCIVFT++ RL ++ I + G Q R +TLT FR F VLV
Sbjct: 333 KGGKCIVFTQTKRDADRLSHIMAK----SIKCEALHGDISQTQRERTLTGFRNSYFNVLV 388
Query: 392 SSDAMTRGMDVEGVRNVINYDMPKYIKTYVHRAGRTARAGQTGRCFTLMSKDEVRRFKKL 451
++D +RG+D+ V VI+Y++P + +VHR+GRT RAG+ G + ++++ R K +
Sbjct: 389 ATDVASRGLDIPNVDLVIHYELPNNSEIFVHRSGRTGRAGKKGTAILVHTENQSRDVKTI 448
>Medtr7g057250.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr7:20515753-20505772 | 20130731
Length = 798
Score = 142 bits (358), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 123/459 (26%), Positives = 203/459 (44%), Gaps = 79/459 (17%)
Query: 35 LHPKLKSALESMGISSLFPVQLAVWQETVGPGNFDRDLCVNSPTGSGKTLAYALPIVQML 94
LHP+L A+ +G P+Q A G +D+ + TGSGKTLA+ LPI+Q L
Sbjct: 169 LHPRLMKAIHKLGFKEPTPIQKACVPAAAHQG---KDVIGAAETGSGKTLAFGLPILQRL 225
Query: 95 STRVAKC--------------------LRALVVVPTRDLAFQVKRVFDGVASPLGLRVGL 134
K LR+L++ PTR+LA QV + VA + +RV
Sbjct: 226 LEEREKAESISGVNGEEAAEKYATTGLLRSLIIAPTRELALQVAKHLKAVAKHINVRVTA 285
Query: 135 AVGQSSVADEISELVHVPAREAGSCYDPQHALFVRFESKVDILVATPGRLMDHINTTKGF 194
VG G + Q L +++ +I+VATPGRL + +++ +
Sbjct: 286 IVG-------------------GILPEKQERL---LKARPEIVVATPGRLWELMSSGEKH 323
Query: 195 TLE--HLHYLVVDETDRLLREAYQSWLPTVLE-LAQSNDDSFSQPADSFFPCSVGALRTR 251
+E L + V+DE DR+++ + L ++++ L SN S D+ +V +++ +
Sbjct: 324 LIELHSLSFFVLDEADRMVQSGHFKELQSIIDMLPMSNISSEDNSKDAQNCVTVSSIQKK 383
Query: 252 RR--------CGVERGFKDK-PYPRLAKMVLSA-------TITQDPG---KLVQLNLHLP 292
+R + F+ K + K LS T+++ G ++L P
Sbjct: 384 KRQTLVFSATVALSADFRKKLKRGSIQKKQLSTDGLDSIETLSERAGMRPNAAIIDLTNP 443
Query: 293 LFLRAGQMRYRLPENLESYKLICETKVKPLYLVALLKSLGGEKCIVFTKSVESTHRLCKL 352
L A +E + C K +L +L G + IVF S+ + + +
Sbjct: 444 SILAA---------KIEESFIECTEDDKDAHLYYILTVHGQGRTIVFCTSIAALRHISSI 494
Query: 353 LNCFEDLQIDMKEYSGLQHQCVRSKTLTAFRKGEFQVLVSSDAMTRGMDVEGVRNVINYD 412
L L +++ Q R K + FR+ + +LV++D RG+D+ GVR V++Y
Sbjct: 495 LRI---LGVNVWTLHAQMQQRARLKAMDRFRENDNGILVATDVAARGLDIPGVRTVVHYQ 551
Query: 413 MPKYIKTYVHRAGRTARAGQTGRCFTLMSKDEVRRFKKL 451
+P + YVHR+GRTARA G L+S E +F L
Sbjct: 552 LPHSAEVYVHRSGRTARASAEGCSIALISPKETSKFASL 590
>Medtr2g066050.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr2:27664451-27658107 | 20130731
Length = 513
Score = 139 bits (349), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 111/375 (29%), Positives = 168/375 (44%), Gaps = 74/375 (19%)
Query: 78 TGSGKTLAYALPIVQMLSTRVAKCLRALVVVPTRDLAFQVKRVFDGVASPLGLRVGLAVG 137
TGSGKT A+ALPI+Q L+ ALVV PTR+LAFQ+ F + S L LR+ + VG
Sbjct: 98 TGSGKTAAFALPILQRLAEHTFGVF-ALVVTPTRELAFQLAEQFRALGSSLRLRIAVVVG 156
Query: 138 QSSVADEISELVHVPAREAGSCYDPQHALFVRFESKVDILVATPGR----LMDHINTTKG 193
+ + ELV P +++ATPGR L D+
Sbjct: 157 GMDMLRQTKELVARP----------------------HLVIATPGRIKVLLKDNPEIAPV 194
Query: 194 FTLEHLHYLVVDETDRLLREAYQSWLPTVLELAQSNDDSFSQPADSFFPCSVGALRTRRR 253
F +LV+DE DR+L +Q L + + N + FF
Sbjct: 195 FA--RTKFLVLDEADRVLDVGFQDELKFIFQCLPENRQNL------FF------------ 234
Query: 254 CGVERGFKDKPYPRLAKMVLSATITQDPGKLVQLNLHLPLFLRAGQMRYRLPENLESYKL 313
SAT T + KL + L+ ++ ENL+ +
Sbjct: 235 --------------------SATTTSNLQKLRE-RYQDKLYAFEAYEGFKTVENLKQQVV 273
Query: 314 ICETKVKPLYLVALL---KSLGGEKCIVFTKSVESTHRLCKLLNCFEDLQIDMKEYSGLQ 370
VK +YL+ +L + +G IVF + HRL +L E L + +
Sbjct: 274 FIPKNVKDVYLLHILSKMEDMGIRSAIVFVSTCRDCHRLNLML---EVLDQEAAALYSFR 330
Query: 371 HQCVRSKTLTAFRKGEFQVLVSSDAMTRGMDVEGVRNVINYDMPKYIKTYVHRAGRTARA 430
Q R + L F+ G+ VL+++D RG+D+ V VINYD+P++ + Y+HR GRTARA
Sbjct: 331 SQAQRLEALHDFKSGKVPVLLATDVAGRGLDIPTVDLVINYDVPRFPRDYIHRVGRTARA 390
Query: 431 GQTGRCFTLMSKDEV 445
G+ G +L+++++V
Sbjct: 391 GRGGLALSLVTQNDV 405
>Medtr6g056080.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr6:20125418-20119486 | 20130731
Length = 681
Score = 132 bits (333), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 121/445 (27%), Positives = 190/445 (42%), Gaps = 99/445 (22%)
Query: 39 LKSALESMGISSLFPVQLAVWQETVGPGNFDRDLCVNSPTGSGKTLAYALPIVQMLSTRV 98
L+ L+ I +LFP+Q + T+ G+ DL + TG GKTLA+ LPI++ L+
Sbjct: 113 LRMKLKENKIEALFPIQAMTFN-TILDGS---DLVGRARTGQGKTLAFVLPILESLTNGP 168
Query: 99 AKCLR---------ALVVVPTRDLAFQVKRVFDGVASPLGLRVGLAVGQSSVADEISELV 149
AK +R +V++PTR+LA QV F+ S LGL G
Sbjct: 169 AKSVRKTGYGRVPSVIVLLPTRELANQVYADFELYGSSLGLSACAVYG------------ 216
Query: 150 HVPAREAGSCYDPQHALFVRFESKVDILVATPGRLMDHINTTKGFTLEHLHYLVVDETDR 209
G+ Y Q + VDI++ TPGR+ DHI L HL + V+DE D
Sbjct: 217 -------GAPYGAQE---TKLRRGVDIVIGTPGRIKDHIERGN-IDLSHLKFRVLDEADE 265
Query: 210 LLREAYQSWLPTVLELAQSNDDSFSQPADSFFPCSVGALRTRRRCGVERGFKDKPYPRLA 269
+LR + + +L Q ++
Sbjct: 266 MLRMGFVDDVELILGKVQD------------------------------------VTKVQ 289
Query: 270 KMVLSATITQDPGKLVQLNLHLPLFLRA--------GQMRYRLPENLESYKLICETKVKP 321
++ SAT+ P + Q++ FL++ G + + N+ L C + +
Sbjct: 290 TLLFSATL---PSWVKQISTK---FLKSDKKTADLVGNEKMKASTNVRHIILPCSSTARA 343
Query: 322 LYLVALLK--SLGGEKCIVFTKSVESTHRLCKLLNCFEDLQIDMKEYSGLQHQCVRSKTL 379
+ +++ S GG + I+F + ES L LL L D+ Q R TL
Sbjct: 344 QLIPDIIRCYSSGG-RTIIFAEKKESASELAGLLPGARALHGDI-------QQSQREITL 395
Query: 380 TAFRKGEFQVLVSSDAMTRGMDVEGVRNVINYDMPKYIKTYVHRAGRTARAGQTGRCFTL 439
FR G+F LV+++ RG+D+ V+ +I + P+ ++ Y+HR+GRT RAG TG L
Sbjct: 396 KGFRSGKFMTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAGNTGVAVML 455
Query: 440 MSKDEVRRFKKLMQKAEAGSCEEHI 464
+ RR + EAG EH+
Sbjct: 456 Y---DPRRSNIAKIEREAGIKFEHV 477
>Medtr6g005320.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr6:708901-704351 | 20130731
Length = 666
Score = 126 bits (317), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 114/427 (26%), Positives = 194/427 (45%), Gaps = 63/427 (14%)
Query: 35 LHPKLKSALESMGISSLFPVQLAVWQETVGPGNFDRDLCVNSPTGSGKTLAYALPIVQML 94
L ++ A+E G + P+Q+A ++ G RD+ + TGSGKT A+ LP++ +
Sbjct: 255 LSQEILKAVEKAGYKTPSPIQMA----SIPLGLQQRDVIGVAETGSGKTAAFVLPMLSYI 310
Query: 95 STRV--------AKCLRALVVVPTRDLAFQVKRVFDGVASPLGLRVGLAVGQSSVADEIS 146
TR+ A+ A+V+ PTR+LA Q++ A +G++V VG S+ ++
Sbjct: 311 -TRLPPISEENEAEGPYAVVMAPTRELAQQIEDETVKFAQYMGIKVVSIVGGQSIEEQ-- 367
Query: 147 ELVHVPAREAGSCYDPQHALFVRFESKVDILVATPGRLMDHINTTKGFTLEHLHYLVVDE 206
+ +I++ATPGRL+D + + L +Y+V+DE
Sbjct: 368 --------------------GFKIRQGCEIVIATPGRLIDCLER-RYAVLNQCNYVVLDE 406
Query: 207 TDRLLREAYQSWLPTVLELAQSNDDSFSQPADSFFPCSVGALRTRRRCGVERGFKDKPYP 266
DR++ ++ + VL+ + P+ + P + + +K
Sbjct: 407 ADRMIDMGFEPQVMGVLD---------AMPSSNLKPENE-----------DEELDEKRIY 446
Query: 267 RLAKMVLSATITQDPGKLVQLNLHLPLFLRAGQMRYRLPENLESYKLICETKVKPLYLVA 326
R M SAT+ +L + L P+ + G + + + + ++ + K L
Sbjct: 447 RTTYM-FSATMPPGVERLARKYLRNPVVVTIGTA-GKATDLISQHVIMMKESEKNYNLHR 504
Query: 327 LLKSLGGEKCIVFTKSVESTHRLCKLLNCFEDLQIDMKEYSGLQHQCVRSKTLTAFRKGE 386
LL L + IVF + +S L K L + + G + Q R +L FR
Sbjct: 505 LLDQLNDKTAIVFVNTKKSADFLAKNLEGYR-----VTTLHGGKSQDQREISLEGFRTKR 559
Query: 387 FQVLVSSDAMTRGMDVEGVRNVINYDMPKYIKTYVHRAGRTARAGQTGRCFTLMSKDEVR 446
+ VLV++D RG+D+ V +VINYDMP I+ Y HR GRT RAG+TG T ++ +
Sbjct: 560 YNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTLQDTD 619
Query: 447 RFKKLMQ 453
F +L Q
Sbjct: 620 VFYELKQ 626
>Medtr6g005320.3 | DEAD-box ATP-dependent RNA helicase | HC |
chr6:708901-704351 | 20130731
Length = 666
Score = 126 bits (317), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 114/427 (26%), Positives = 194/427 (45%), Gaps = 63/427 (14%)
Query: 35 LHPKLKSALESMGISSLFPVQLAVWQETVGPGNFDRDLCVNSPTGSGKTLAYALPIVQML 94
L ++ A+E G + P+Q+A ++ G RD+ + TGSGKT A+ LP++ +
Sbjct: 255 LSQEILKAVEKAGYKTPSPIQMA----SIPLGLQQRDVIGVAETGSGKTAAFVLPMLSYI 310
Query: 95 STRV--------AKCLRALVVVPTRDLAFQVKRVFDGVASPLGLRVGLAVGQSSVADEIS 146
TR+ A+ A+V+ PTR+LA Q++ A +G++V VG S+ ++
Sbjct: 311 -TRLPPISEENEAEGPYAVVMAPTRELAQQIEDETVKFAQYMGIKVVSIVGGQSIEEQ-- 367
Query: 147 ELVHVPAREAGSCYDPQHALFVRFESKVDILVATPGRLMDHINTTKGFTLEHLHYLVVDE 206
+ +I++ATPGRL+D + + L +Y+V+DE
Sbjct: 368 --------------------GFKIRQGCEIVIATPGRLIDCLER-RYAVLNQCNYVVLDE 406
Query: 207 TDRLLREAYQSWLPTVLELAQSNDDSFSQPADSFFPCSVGALRTRRRCGVERGFKDKPYP 266
DR++ ++ + VL+ + P+ + P + + +K
Sbjct: 407 ADRMIDMGFEPQVMGVLD---------AMPSSNLKPENE-----------DEELDEKRIY 446
Query: 267 RLAKMVLSATITQDPGKLVQLNLHLPLFLRAGQMRYRLPENLESYKLICETKVKPLYLVA 326
R M SAT+ +L + L P+ + G + + + + ++ + K L
Sbjct: 447 RTTYM-FSATMPPGVERLARKYLRNPVVVTIGTA-GKATDLISQHVIMMKESEKNYNLHR 504
Query: 327 LLKSLGGEKCIVFTKSVESTHRLCKLLNCFEDLQIDMKEYSGLQHQCVRSKTLTAFRKGE 386
LL L + IVF + +S L K L + + G + Q R +L FR
Sbjct: 505 LLDQLNDKTAIVFVNTKKSADFLAKNLEGYR-----VTTLHGGKSQDQREISLEGFRTKR 559
Query: 387 FQVLVSSDAMTRGMDVEGVRNVINYDMPKYIKTYVHRAGRTARAGQTGRCFTLMSKDEVR 446
+ VLV++D RG+D+ V +VINYDMP I+ Y HR GRT RAG+TG T ++ +
Sbjct: 560 YNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTLQDTD 619
Query: 447 RFKKLMQ 453
F +L Q
Sbjct: 620 VFYELKQ 626
>Medtr6g005320.2 | DEAD-box ATP-dependent RNA helicase | HC |
chr6:708891-704351 | 20130731
Length = 666
Score = 126 bits (317), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 114/427 (26%), Positives = 194/427 (45%), Gaps = 63/427 (14%)
Query: 35 LHPKLKSALESMGISSLFPVQLAVWQETVGPGNFDRDLCVNSPTGSGKTLAYALPIVQML 94
L ++ A+E G + P+Q+A ++ G RD+ + TGSGKT A+ LP++ +
Sbjct: 255 LSQEILKAVEKAGYKTPSPIQMA----SIPLGLQQRDVIGVAETGSGKTAAFVLPMLSYI 310
Query: 95 STRV--------AKCLRALVVVPTRDLAFQVKRVFDGVASPLGLRVGLAVGQSSVADEIS 146
TR+ A+ A+V+ PTR+LA Q++ A +G++V VG S+ ++
Sbjct: 311 -TRLPPISEENEAEGPYAVVMAPTRELAQQIEDETVKFAQYMGIKVVSIVGGQSIEEQ-- 367
Query: 147 ELVHVPAREAGSCYDPQHALFVRFESKVDILVATPGRLMDHINTTKGFTLEHLHYLVVDE 206
+ +I++ATPGRL+D + + L +Y+V+DE
Sbjct: 368 --------------------GFKIRQGCEIVIATPGRLIDCLER-RYAVLNQCNYVVLDE 406
Query: 207 TDRLLREAYQSWLPTVLELAQSNDDSFSQPADSFFPCSVGALRTRRRCGVERGFKDKPYP 266
DR++ ++ + VL+ + P+ + P + + +K
Sbjct: 407 ADRMIDMGFEPQVMGVLD---------AMPSSNLKPENE-----------DEELDEKRIY 446
Query: 267 RLAKMVLSATITQDPGKLVQLNLHLPLFLRAGQMRYRLPENLESYKLICETKVKPLYLVA 326
R M SAT+ +L + L P+ + G + + + + ++ + K L
Sbjct: 447 RTTYM-FSATMPPGVERLARKYLRNPVVVTIGTA-GKATDLISQHVIMMKESEKNYNLHR 504
Query: 327 LLKSLGGEKCIVFTKSVESTHRLCKLLNCFEDLQIDMKEYSGLQHQCVRSKTLTAFRKGE 386
LL L + IVF + +S L K L + + G + Q R +L FR
Sbjct: 505 LLDQLNDKTAIVFVNTKKSADFLAKNLEGYR-----VTTLHGGKSQDQREISLEGFRTKR 559
Query: 387 FQVLVSSDAMTRGMDVEGVRNVINYDMPKYIKTYVHRAGRTARAGQTGRCFTLMSKDEVR 446
+ VLV++D RG+D+ V +VINYDMP I+ Y HR GRT RAG+TG T ++ +
Sbjct: 560 YNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTLQDTD 619
Query: 447 RFKKLMQ 453
F +L Q
Sbjct: 620 VFYELKQ 626
>Medtr1g102410.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr1:46249372-46245255 | 20130731
Length = 641
Score = 125 bits (314), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 123/477 (25%), Positives = 196/477 (41%), Gaps = 101/477 (21%)
Query: 39 LKSALESMGISSLFPVQLAVWQETVGPGNFDRDLCVNSPTGSGKTLAYALPIVQMLSTRV 98
L+ L+ GI SLFP+Q A+ + + G DL + TG GKTLA+ LPI++ ++
Sbjct: 54 LREKLKEKGIESLFPIQ-AMTFDIILQGC---DLVGRARTGQGKTLAFVLPILESVTNGK 109
Query: 99 AKCLRA-------------------------LVVVPTRDLAFQVKRVFDGVASPLGLRVG 133
AK A LV++PTR+LA QV F+ +GL
Sbjct: 110 AKETNAKTKETNGNARESRKGGYGGPPKPSVLVLLPTRELACQVNADFEVYGGAMGLTSC 169
Query: 134 LAVGQSSVADEISELVHVPAREAGSCYDPQHALFVRFESKVDILVATPGRLMDHINTTKG 193
G G+ Y Q ++ E VDI++ TPGR+ DHI
Sbjct: 170 CLYG-------------------GAPYKAQE---IKLERGVDIVIGTPGRIKDHI-VRGS 206
Query: 194 FTLEHLHYLVVDETDRLLREAYQSWLPTVLELAQSNDDSFSQPADSFFPCSVGALRTRRR 253
L L + V+DE D +LR + + +L ++ D Q F ++
Sbjct: 207 IDLSQLKFRVLDEADEMLRMGFVEDVELILGKVKNVD----QVQTLLFSATL-------- 254
Query: 254 CGVERGFKDKPYPRLAKMVLSATITQD--PGKLVQLNLHLPLFLRAGQMRYRLPENLESY 311
P K + + +D LV G + + ++ Y
Sbjct: 255 ------------PEWVKNIAKRFLKEDKQTADLV------------GNTKMKASTSVRHY 290
Query: 312 KLICETKVKPLYLVALLKSLGGE-KCIVFTKSVESTHRLCKLLNCFEDLQIDMKEYSGLQ 370
L C + + +++ E + I+FT++ ES +L +LL L D+
Sbjct: 291 ILPCTGAARSQLIPDIIRCYSSEGRTIIFTETKESASQLAELLPGARALHGDI------- 343
Query: 371 HQCVRSKTLTAFRKGEFQVLVSSDAMTRGMDVEGVRNVINYDMPKYIKTYVHRAGRTARA 430
Q R TL+ FR G+F LV+++ RG+D+ V+ +I + P+ ++ Y+HR+GRT RA
Sbjct: 344 QQAQREVTLSGFRYGKFMTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRA 403
Query: 431 GQTGRCFTLMSKDEVRRFKKLMQKAEAGSCEEHILPSSLIDALHTTYQSALEKFKEI 487
G TG L + RR + E+G EHI D + A E ++
Sbjct: 404 GNTGVAVMLY---DPRRSNIPKIERESGVKFEHISAPQANDIAKAVGREAAEMIMQV 457
>Medtr8g079452.1 | helicase family carboxy-terminal domain protein |
HC | chr8:34005644-34004777 | 20130731
Length = 113
Score = 125 bits (314), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 59/73 (80%), Positives = 65/73 (89%)
Query: 376 SKTLTAFRKGEFQVLVSSDAMTRGMDVEGVRNVINYDMPKYIKTYVHRAGRTARAGQTGR 435
SKTL FRKG FQVL+SSDA+TR MDVEGVRNVINYD+PK+IKTYVHRAGRTARA QTGR
Sbjct: 23 SKTLNEFRKGVFQVLLSSDALTRVMDVEGVRNVINYDVPKFIKTYVHRAGRTARAVQTGR 82
Query: 436 CFTLMSKDEVRRF 448
CFTLMS+DE +
Sbjct: 83 CFTLMSEDEANDY 95
>Medtr4g079320.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr4:30630772-30640503 | 20130731
Length = 787
Score = 125 bits (314), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 103/378 (27%), Positives = 169/378 (44%), Gaps = 67/378 (17%)
Query: 71 DLCVNSPTGSGKTLAYALPIVQMLSTRVAKC-LRALVVVPTRDLAFQVKRVFDGVASPLG 129
D+ + TGSGKT A+ +P++ L+ V + +R L++ PTRDLA Q + +
Sbjct: 57 DVVAMARTGSGKTAAFLVPMLHRLNQHVPQGGVRGLILSPTRDLAQQTLKFTKELGHFTD 116
Query: 130 LRVGLAVGQSSVADEISELVHVPAREAGSCYDPQHALFVRFESKVDILVATPGRLMDHIN 189
LRV L VG S+ + EL P DI++ATPGRLM H++
Sbjct: 117 LRVSLLVGGDSMESQFEELAQNP----------------------DIIIATPGRLMHHLS 154
Query: 190 TTKGFTLEHLHYLVVDETDRLLREAYQSWLPTVLELAQSNDDSFSQPADSFFPCSVGALR 249
+L + Y+V DE D L + L +L AQ ++ + + P ++
Sbjct: 155 EVDDMSLRKVEYVVFDEADCLFGMGFAEQLHQIL--AQLGENRQTLLFSATLPSALAEF- 211
Query: 250 TRRRCGVERGFKDKPYPRLAKMVLSATITQDPGKLVQLNLHLPLFLRAGQMRYRLPENLE 309
+ G +D PRL ++ L I+ D L L F + +Y
Sbjct: 212 ------AKAGLRD---PRLVRLDLETKISPD--------LKLVFFTLRQEEKY------- 247
Query: 310 SYKLICETKVKPLYLVALLKSLGG--EKCIVFTKSVESTHRLCKLLNCFEDLQIDMKEYS 367
L+ L++ L G E+ ++F V + H + L + F+ I
Sbjct: 248 ------------AALLYLIRELIGSDEQTLIF---VSTKHHVEFLNSLFQLEGIRPSVCY 292
Query: 368 GLQHQCVRSKTLTAFRKGEFQVLVSSDAMTRGMDVEGVRNVINYDMPKYIKTYVHRAGRT 427
G Q R + + FR + +L+ +D RG+D+ + NVIN+D P K +VHR GR
Sbjct: 293 GDMDQDARKEHVARFRSRKTMLLIVTDIAARGIDIPLLDNVINWDFPPKPKIFVHRVGRV 352
Query: 428 ARAGQTGRCFTLMSKDEV 445
ARAG+TG ++ ++ +++
Sbjct: 353 ARAGRTGTAYSFLTAEDM 370
>Medtr4g134170.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr4:56166694-56169176 | 20130731
Length = 706
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 116/427 (27%), Positives = 195/427 (45%), Gaps = 61/427 (14%)
Query: 35 LHPKLKSALESMGISSLFPVQLAVWQETVGPGNFDRDLCVNSPTGSGKTLAYALPIVQML 94
L +L A+E G + P+Q+A + G RD+ + TGSGKT A+ LP++ +
Sbjct: 293 LSQELLKAVEKAGYKTPSPIQMAA----IPLGLQQRDVIGVAETGSGKTAAFVLPMLSYI 348
Query: 95 STRV--------AKCLRALVVVPTRDLAFQVKRVFDGVASPLGLRVGLAVGQSSVADEIS 146
TR+ A+ A+V+ PTR+LA Q++ A +G++V VG S+ ++
Sbjct: 349 -TRLPPISEENEAEGPYAVVMAPTRELAQQIEDETVKFAQYMGIKVVSIVGGQSIEEQ-- 405
Query: 147 ELVHVPAREAGSCYDPQHALFVRFESKVDILVATPGRLMDHINTTKGFTLEHLHYLVVDE 206
+ +I++ATPGRL+D + + L +Y+V+DE
Sbjct: 406 --------------------GFKIRQGCEIVIATPGRLIDCLER-RYAVLNQCNYVVLDE 444
Query: 207 TDRLLREAYQSWLPTVLELAQSNDDSFSQPADSFFPCSVGALRTRRRCGVERGFKDKPYP 266
DR++ ++ + VL+ + P+ + P + + +K
Sbjct: 445 ADRMIDMGFEPQVMGVLD---------AMPSSNLKPENE-----------DEELDEKRIY 484
Query: 267 RLAKMVLSATITQDPGKLVQLNLHLPLFLRAGQMRYRLPENLESYKLICETKVKPLYLVA 326
R M SAT+ +L + L P+ + G + + + + ++ + K L
Sbjct: 485 RTTYM-FSATMPPAVERLARKYLRNPVVVTIGTA-GKATDLISQHVIMMKESEKNYKLQR 542
Query: 327 LLKSLGGEKCIVFTKSVESTHRLCKLLNCFEDLQIDMKEYSGLQHQCVRSKTLTAFRKGE 386
LL L + IVF + +S L K L+ E ++ G + Q R +L FR
Sbjct: 543 LLDELNDKTAIVFVNTKKSADFLAKNLDK-EGYRVTT--LHGGKSQDQREISLEGFRTKR 599
Query: 387 FQVLVSSDAMTRGMDVEGVRNVINYDMPKYIKTYVHRAGRTARAGQTGRCFTLMSKDEVR 446
+ VLV++D RG+D+ V +VINYDMP I+ Y HR GRT RAG+TG T ++ +
Sbjct: 600 YNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTLQDTD 659
Query: 447 RFKKLMQ 453
F +L Q
Sbjct: 660 VFYELKQ 666
>Medtr2g032630.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr2:12277517-12285182 | 20130731
Length = 1175
Score = 122 bits (306), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 115/435 (26%), Positives = 179/435 (41%), Gaps = 76/435 (17%)
Query: 37 PKLKSALESMGISSLFPVQLAVWQETVGPGNFDRDLCVNSPTGSGKTLAYALPIVQMLST 96
P++ + S G S+ P+Q W + RD+ + TGSGKTL Y +P +L
Sbjct: 504 PEILQEVCSAGFSNPTPIQAQTWPIALQ----GRDIVAIAKTGSGKTLGYLMPAFILLRQ 559
Query: 97 RVAKCLRA---LVVVPTRDLAFQVKRVFDGVASPLGLRVGLAVGQSSVADEISELVHVPA 153
R L LV+ PTR+LA Q++ A + G + A ++ EL
Sbjct: 560 RRNNSLNGPTVLVLAPTRELATQIQEEVFKFARSSRVSCTCLYGGAPKALQLKEL----- 614
Query: 154 REAGSCYDPQHALFVRFESKVDILVATPGRLMDHINTTKGFTLEHLHYLVVDETDRLLRE 213
+ DI+VATPGRL D I K + LV+DE DR+L
Sbjct: 615 -----------------DRGADIVVATPGRLND-ILEMKKIDFGQVSLLVLDEADRMLDM 656
Query: 214 AYQSWLPTVLELAQSNDDSFSQPADSFFPCSVGALRTRRRCGVERGFKDKPYPRLAKMVL 273
++ + R ++ PR ++
Sbjct: 657 GFEPQI--------------------------------------RKIVNEIPPRRQTLMY 678
Query: 274 SATITQDPGKLVQLNLHLPLFLRAGQM-RYRLPENLESYKLICETKVKPLYLVALLKSLG 332
+AT ++ K+ L P+ + G + +++ Y + K L +L+S
Sbjct: 679 TATWPKEVRKIAGDLLVNPVQVNIGNVDELAANKSITQYVEVVPQMEKQRRLEQILRSQE 738
Query: 333 -GEKCIVFTKSVESTHRLCKLLNCFEDLQIDMKEYSGLQHQCVRSKTLTAFRKGEFQVLV 391
G K I+F ST +LC L G + Q R L FR G+ +LV
Sbjct: 739 RGSKIIIFC----STKKLCDQLARSIGRTFGAAAIHGDKSQGERDWVLGQFRTGKSPILV 794
Query: 392 SSDAMTRGMDVEGVRNVINYDMPKYIKTYVHRAGRTARAGQTGRCFTLMSKDEVRRFKKL 451
++D RG+D++ +R VINYD P ++ YVHR GRT RAG TG +T S+ + + L
Sbjct: 795 ATDVAARGLDIKDIRVVINYDFPNGVEDYVHRIGRTGRAGATGVAYTFFSEQDWKHAGDL 854
Query: 452 MQKAEAGSCEEHILP 466
++ E +H+LP
Sbjct: 855 IKVLEG--ANQHVLP 867
>Medtr2g032630.2 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr2:12277517-12285182 | 20130731
Length = 1175
Score = 122 bits (306), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 115/435 (26%), Positives = 179/435 (41%), Gaps = 76/435 (17%)
Query: 37 PKLKSALESMGISSLFPVQLAVWQETVGPGNFDRDLCVNSPTGSGKTLAYALPIVQMLST 96
P++ + S G S+ P+Q W + RD+ + TGSGKTL Y +P +L
Sbjct: 504 PEILQEVCSAGFSNPTPIQAQTWPIALQ----GRDIVAIAKTGSGKTLGYLMPAFILLRQ 559
Query: 97 RVAKCLRA---LVVVPTRDLAFQVKRVFDGVASPLGLRVGLAVGQSSVADEISELVHVPA 153
R L LV+ PTR+LA Q++ A + G + A ++ EL
Sbjct: 560 RRNNSLNGPTVLVLAPTRELATQIQEEVFKFARSSRVSCTCLYGGAPKALQLKEL----- 614
Query: 154 REAGSCYDPQHALFVRFESKVDILVATPGRLMDHINTTKGFTLEHLHYLVVDETDRLLRE 213
+ DI+VATPGRL D I K + LV+DE DR+L
Sbjct: 615 -----------------DRGADIVVATPGRLND-ILEMKKIDFGQVSLLVLDEADRMLDM 656
Query: 214 AYQSWLPTVLELAQSNDDSFSQPADSFFPCSVGALRTRRRCGVERGFKDKPYPRLAKMVL 273
++ + R ++ PR ++
Sbjct: 657 GFEPQI--------------------------------------RKIVNEIPPRRQTLMY 678
Query: 274 SATITQDPGKLVQLNLHLPLFLRAGQM-RYRLPENLESYKLICETKVKPLYLVALLKSLG 332
+AT ++ K+ L P+ + G + +++ Y + K L +L+S
Sbjct: 679 TATWPKEVRKIAGDLLVNPVQVNIGNVDELAANKSITQYVEVVPQMEKQRRLEQILRSQE 738
Query: 333 -GEKCIVFTKSVESTHRLCKLLNCFEDLQIDMKEYSGLQHQCVRSKTLTAFRKGEFQVLV 391
G K I+F ST +LC L G + Q R L FR G+ +LV
Sbjct: 739 RGSKIIIFC----STKKLCDQLARSIGRTFGAAAIHGDKSQGERDWVLGQFRTGKSPILV 794
Query: 392 SSDAMTRGMDVEGVRNVINYDMPKYIKTYVHRAGRTARAGQTGRCFTLMSKDEVRRFKKL 451
++D RG+D++ +R VINYD P ++ YVHR GRT RAG TG +T S+ + + L
Sbjct: 795 ATDVAARGLDIKDIRVVINYDFPNGVEDYVHRIGRTGRAGATGVAYTFFSEQDWKHAGDL 854
Query: 452 MQKAEAGSCEEHILP 466
++ E +H+LP
Sbjct: 855 IKVLEG--ANQHVLP 867
>Medtr3g083690.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr3:37768711-37774877 | 20130731
Length = 613
Score = 120 bits (300), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 115/411 (27%), Positives = 184/411 (44%), Gaps = 89/411 (21%)
Query: 70 RDLCVNSPTGSGKTLAYALPIVQMLST-----RVAKCLR-----ALVVVPTRDLAFQVKR 119
RDL + TGSGKT A+ PI+ + T R + +R ALV+ PTR+L+ Q+
Sbjct: 182 RDLMACAQTGSGKTAAFCFPIISGIMTGQPAQRPPRGVRTVCPLALVLSPTRELSMQIHE 241
Query: 120 VFDGVASPLGLRVGLAVGQSSVADEISELVHVPAREAGSCYDPQHALFVRFESKVDILVA 179
+ G+RV +A G + + ++ EL E VDILVA
Sbjct: 242 EARKFSYQTGVRVVVAYGGAPINQQLREL----------------------ERGVDILVA 279
Query: 180 TPGRLMDHINTTKGFTLEHLHYLVVDETDRLLREAYQSWLPTVLELAQSNDDSFSQPADS 239
TPGRL+D + + +L + YL +DE DR+L ++ P + ++ + D PA
Sbjct: 280 TPGRLVDLLERAR-VSLSMIRYLALDEADRMLDMGFE---PQIRKIVEQMD---MPPA-- 330
Query: 240 FFPCSVGALRTRRRCGVERGFKDKPYPRLAKMVLSATITQDPGKLVQLNLHLPLFLRAGQ 299
GV + M+ SAT ++ +L L +FL G+
Sbjct: 331 ---------------GVRQ-----------TMLFSATFPKEIQRLASDFLSNYIFLAVGR 364
Query: 300 MRYRLPENLESYKLICETKVKPLYLVALL-----KSLGGEKC--IVFTKSVEST----HR 348
+ + + + E+ K +L+ LL + G++ +VF ++ + H
Sbjct: 365 VGSSTDLIDQRVEYVQESD-KRSHLMDLLHAQRANGVQGKQALTLVFVETKKGADALEHW 423
Query: 349 LCKLLNCFEDLQIDMKEYSGLQHQCVRSKTLTAFRKGEFQVLVSSDAMTRGMDVEGVRNV 408
LC LN F I G + Q R L +F+ G +LV++D RG+D+ V +V
Sbjct: 424 LC--LNNFPATTI-----HGDRSQQEREAALRSFKSGNTPILVATDVAARGLDIPHVAHV 476
Query: 409 INYDMPKYIKTYVHRAGRTARAGQTGRCFTLMSKDE---VRRFKKLMQKAE 456
+N+D+P I YVHR GRT RAG+ G +++ R + LMQ+A
Sbjct: 477 VNFDLPNDIDDYVHRIGRTGRAGKKGLATAFFNENNTSMARSLQDLMQEAN 527
>Medtr3g083690.2 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr3:37768655-37774862 | 20130731
Length = 613
Score = 120 bits (300), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 115/411 (27%), Positives = 184/411 (44%), Gaps = 89/411 (21%)
Query: 70 RDLCVNSPTGSGKTLAYALPIVQMLST-----RVAKCLR-----ALVVVPTRDLAFQVKR 119
RDL + TGSGKT A+ PI+ + T R + +R ALV+ PTR+L+ Q+
Sbjct: 182 RDLMACAQTGSGKTAAFCFPIISGIMTGQPAQRPPRGVRTVCPLALVLSPTRELSMQIHE 241
Query: 120 VFDGVASPLGLRVGLAVGQSSVADEISELVHVPAREAGSCYDPQHALFVRFESKVDILVA 179
+ G+RV +A G + + ++ EL E VDILVA
Sbjct: 242 EARKFSYQTGVRVVVAYGGAPINQQLREL----------------------ERGVDILVA 279
Query: 180 TPGRLMDHINTTKGFTLEHLHYLVVDETDRLLREAYQSWLPTVLELAQSNDDSFSQPADS 239
TPGRL+D + + +L + YL +DE DR+L ++ P + ++ + D PA
Sbjct: 280 TPGRLVDLLERAR-VSLSMIRYLALDEADRMLDMGFE---PQIRKIVEQMD---MPPA-- 330
Query: 240 FFPCSVGALRTRRRCGVERGFKDKPYPRLAKMVLSATITQDPGKLVQLNLHLPLFLRAGQ 299
GV + M+ SAT ++ +L L +FL G+
Sbjct: 331 ---------------GVRQ-----------TMLFSATFPKEIQRLASDFLSNYIFLAVGR 364
Query: 300 MRYRLPENLESYKLICETKVKPLYLVALL-----KSLGGEKC--IVFTKSVEST----HR 348
+ + + + E+ K +L+ LL + G++ +VF ++ + H
Sbjct: 365 VGSSTDLIDQRVEYVQESD-KRSHLMDLLHAQRANGVQGKQALTLVFVETKKGADALEHW 423
Query: 349 LCKLLNCFEDLQIDMKEYSGLQHQCVRSKTLTAFRKGEFQVLVSSDAMTRGMDVEGVRNV 408
LC LN F I G + Q R L +F+ G +LV++D RG+D+ V +V
Sbjct: 424 LC--LNNFPATTI-----HGDRSQQEREAALRSFKSGNTPILVATDVAARGLDIPHVAHV 476
Query: 409 INYDMPKYIKTYVHRAGRTARAGQTGRCFTLMSKDE---VRRFKKLMQKAE 456
+N+D+P I YVHR GRT RAG+ G +++ R + LMQ+A
Sbjct: 477 VNFDLPNDIDDYVHRIGRTGRAGKKGLATAFFNENNTSMARSLQDLMQEAN 527
>Medtr3g467550.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr3:27857732-27867387 | 20130731
Length = 561
Score = 117 bits (293), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 108/408 (26%), Positives = 178/408 (43%), Gaps = 82/408 (20%)
Query: 70 RDLCVNSPTGSGKTLAYALPIVQML----STRVAKCLRALVVVPTRDLAFQVKRVFDGVA 125
RDL + TGSGKT A+ +P++Q R ALV+ PTR+LA Q+++ +
Sbjct: 154 RDLLGCAETGSGKTAAFTIPMIQHCLAQPPIRRGDGPLALVLAPTRELAQQIEKEVQAFS 213
Query: 126 SPL-GLRVGLAVGQSSVADEISELVHVPAREAGSCYDPQHALFVRFESKVDILVATPGRL 184
L + + VG +++ + SEL + V+I VATPGR
Sbjct: 214 RSLESFKTAIVVGGTNIEKQRSEL----------------------RAGVEIAVATPGRF 251
Query: 185 MDHINTTKGFT-LEHLHYLVVDETDRLLREAYQSWLPTVLELAQSNDDSFSQPADSFFPC 243
+DH+ +G T L + Y+V+DE DR+L ++ P + E+ +S P
Sbjct: 252 IDHLQ--QGNTSLSRISYVVLDEADRMLDMGFE---PQIREIMRS------------LP- 293
Query: 244 SVGALRTRRRCGVERGFKDKPYPRLAKMVLSATITQDPGKLVQLNLHLPLFLRAGQMRYR 303
+ ++ SAT+ + L + L P+ ++ G++
Sbjct: 294 ----------------------EKHQTLLFSATMPVEIEALSKEYLASPVQVKVGKVSSP 331
Query: 304 LPENLESYKLICET-KVKPLYLVALLKSLGGEKC-------IVFTKSVESTHRLCKLLNC 355
++ + E K+ L + + ++ EKC IVF VE R ++
Sbjct: 332 TTNVSQTLVKVSENEKIDRLLDLLVEEASQAEKCGHPFPLTIVF---VERKTRCDEVAEA 388
Query: 356 FEDLQIDMKEYSGLQHQCVRSKTLTAFRKGEFQVLVSSDAMTRGMDVEGVRNVINYDMPK 415
+ G + Q R L FR +LV++D +RG+DV GV +VIN D+PK
Sbjct: 389 LIAQGLSAVSLHGGRSQSEREAALHDFRSSSTSILVATDVASRGLDVTGVSHVINLDLPK 448
Query: 416 YIKTYVHRAGRTARAGQTGRCFTLMSKDE---VRRFKKLMQKAEAGSC 460
+ Y+HR GRT RAG TG + + + V +K + AE+G+
Sbjct: 449 TTEDYIHRIGRTGRAGSTGIATSFYTDRDMFLVSNIRKAIADAESGNA 496
>Medtr3g467550.2 | DEAD-box ATP-dependent RNA helicase | HC |
chr3:27857806-27867020 | 20130731
Length = 530
Score = 117 bits (293), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 108/408 (26%), Positives = 178/408 (43%), Gaps = 82/408 (20%)
Query: 70 RDLCVNSPTGSGKTLAYALPIVQML----STRVAKCLRALVVVPTRDLAFQVKRVFDGVA 125
RDL + TGSGKT A+ +P++Q R ALV+ PTR+LA Q+++ +
Sbjct: 123 RDLLGCAETGSGKTAAFTIPMIQHCLAQPPIRRGDGPLALVLAPTRELAQQIEKEVQAFS 182
Query: 126 SPL-GLRVGLAVGQSSVADEISELVHVPAREAGSCYDPQHALFVRFESKVDILVATPGRL 184
L + + VG +++ + SEL + V+I VATPGR
Sbjct: 183 RSLESFKTAIVVGGTNIEKQRSEL----------------------RAGVEIAVATPGRF 220
Query: 185 MDHINTTKGFT-LEHLHYLVVDETDRLLREAYQSWLPTVLELAQSNDDSFSQPADSFFPC 243
+DH+ +G T L + Y+V+DE DR+L ++ P + E+ +S P
Sbjct: 221 IDHLQ--QGNTSLSRISYVVLDEADRMLDMGFE---PQIREIMRS------------LP- 262
Query: 244 SVGALRTRRRCGVERGFKDKPYPRLAKMVLSATITQDPGKLVQLNLHLPLFLRAGQMRYR 303
+ ++ SAT+ + L + L P+ ++ G++
Sbjct: 263 ----------------------EKHQTLLFSATMPVEIEALSKEYLASPVQVKVGKVSSP 300
Query: 304 LPENLESYKLICET-KVKPLYLVALLKSLGGEKC-------IVFTKSVESTHRLCKLLNC 355
++ + E K+ L + + ++ EKC IVF VE R ++
Sbjct: 301 TTNVSQTLVKVSENEKIDRLLDLLVEEASQAEKCGHPFPLTIVF---VERKTRCDEVAEA 357
Query: 356 FEDLQIDMKEYSGLQHQCVRSKTLTAFRKGEFQVLVSSDAMTRGMDVEGVRNVINYDMPK 415
+ G + Q R L FR +LV++D +RG+DV GV +VIN D+PK
Sbjct: 358 LIAQGLSAVSLHGGRSQSEREAALHDFRSSSTSILVATDVASRGLDVTGVSHVINLDLPK 417
Query: 416 YIKTYVHRAGRTARAGQTGRCFTLMSKDE---VRRFKKLMQKAEAGSC 460
+ Y+HR GRT RAG TG + + + V +K + AE+G+
Sbjct: 418 TTEDYIHRIGRTGRAGSTGIATSFYTDRDMFLVSNIRKAIADAESGNA 465
>Medtr2g055850.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr2:23956977-23948909 | 20130731
Length = 557
Score = 117 bits (292), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 116/460 (25%), Positives = 195/460 (42%), Gaps = 88/460 (19%)
Query: 35 LHPKLKSALESMGISSLFPVQLAVWQETVGPGNFDRDLCVNSPTGSGKTLAYALPIVQML 94
L + A+ +M + + +Q +++ P +D+ + TGSGKTLA+ +P V++L
Sbjct: 97 LSERTSQAIAAMSFTHMTQIQ----AKSIPPLLMGKDVLGAARTGSGKTLAFLIPAVELL 152
Query: 95 ST---RVAKCLRALVVVPTRDLAFQVKRVFDGV-----ASPLGLRVGLAVGQSSVADEIS 146
+V+ PTR+LA Q V + + LG +G VG+ A+ I
Sbjct: 153 YNVQFTPRNGTGVIVICPTRELAIQTHAVASELMKGYHSQTLGKVIG-GVGRKGEAERIV 211
Query: 147 ELVHVPAREAGSCYDPQHALFVRFESKVDILVATPGRLMDHINTTKGFTLEHLHYLVVDE 206
+ V++L+ATPGRL+DH+ TKGF ++L L++DE
Sbjct: 212 K-------------------------GVNLLIATPGRLLDHLQNTKGFIYKNLKCLMIDE 246
Query: 207 TDRLLREAYQSWLPTVLELAQSNDDSFSQPADSFFPCSVGALRTRRRCGVERGFKDKPYP 266
DR+L ++ + +L + L +R+
Sbjct: 247 ADRILESNFEEEMKQILNI----------------------LPKKRQTA----------- 273
Query: 267 RLAKMVLSATITQDPGKLVQLNLHL-PLFLRAGQMRYRLP-ENLESYKLICETKVKPLYL 324
+ SAT T+ L +L+ P+++ R ++ E LE ++ + + L
Sbjct: 274 -----LFSATQTKKVEDLARLSFQTPPVYVDVDIGREKVTVEGLEQGYVVVPCAKRFVVL 328
Query: 325 VALLKSLGGEKCIVFTKSVESTHRLCKLLNCFEDLQIDMKEYSGLQHQCVRSKTLTAFRK 384
+ LK +K +VF S S LL + +D G Q Q R+ T F K
Sbjct: 329 YSFLKRYQSKKVMVFFSSCNSVKFHADLLKF---IGLDCLNIHGKQKQNSRTSTFFNFCK 385
Query: 385 GEFQVLVSSDAMTRGMDVEGVRNVINYDMPKYIKTYVHRAGRTARA-GQTGRCFTLMSKD 443
E +L+ +D RG+D+ V ++ +D P K Y+HR GRTAR G G + +
Sbjct: 386 AEKGILLCTDVAARGLDIPAVDWIVQFDPPDEPKEYIHRVGRTARGEGGKGNALLFLIPE 445
Query: 444 EVRRFKKLMQKAEAGSCEEHILPSSLIDALHTTYQSALEK 483
E++ + L KA +E+ + D + QS LEK
Sbjct: 446 ELQFLRYL--KAAKVPVKEY----AFDDKKLSNVQSQLEK 479
>Medtr1g054630.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr1:23756195-23750953 | 20130731
Length = 608
Score = 116 bits (290), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 110/409 (26%), Positives = 182/409 (44%), Gaps = 86/409 (21%)
Query: 70 RDLCVNSPTGSGKTLAYALPIVQMLST-------RVAKCLR--ALVVVPTRDLAFQVKRV 120
RDL + TGSGKT A+ PI+ + T RVA+ AL++ PTR+L+ Q+
Sbjct: 191 RDLMACAQTGSGKTAAFCFPIISGILTEQYAQRPRVARTAYPLALILSPTRELSCQIHDE 250
Query: 121 FDGVASPLGLRVGLAVGQSSVADEISELVHVPAREAGSCYDPQHALFVRFESKVDILVAT 180
+ G++V +A G + + ++ EL E VDILVAT
Sbjct: 251 AKKFSYQTGVKVVVAYGGAPITQQLREL----------------------ERGVDILVAT 288
Query: 181 PGRLMDHINTTKGFTLEHLHYLVVDETDRLLREAYQSWLPTVLELAQSNDDSFSQPADSF 240
PGRL+D + + +L+ + YL +DE DR+L ++ + ++E
Sbjct: 289 PGRLVDLLERAR-VSLQMIRYLALDEADRMLDMGFEPQIRKIVEQM-------------- 333
Query: 241 FPCSVGALRTRRRCGVERGFKDKPYPRLAKMVL-SATITQDPGKLVQLNLHLPLFLRAGQ 299
D P P + + +L SAT ++ +L L +FL G+
Sbjct: 334 ---------------------DMPPPGMRQTLLFSATFPKEIQRLASDFLASYIFLAVGR 372
Query: 300 MRYRLPENLESYKLICETKVKPLYLVALLKS-----LGGEK--CIVFTKSVESTHRL--C 350
+ + + + E+ K +L+ LL + + G++ +VF ++ + L C
Sbjct: 373 VGSSTDLIAQRVEYVLESD-KRSHLMDLLHAQRENDVNGKQGLTLVFVETKKGADALEHC 431
Query: 351 KLLNCFEDLQIDMKEYSGLQHQCVRSKTLTAFRKGEFQVLVSSDAMTRGMDVEGVRNVIN 410
+N F I G + Q R + L +F+ G +LV++D RG+D+ V +V+N
Sbjct: 432 LCVNGFPATCI-----HGDRTQQEREQALRSFKTGNTPILVATDVAARGLDIPRVAHVVN 486
Query: 411 YDMPKYIKTYVHRAGRTARAGQTGRCFTLMSKDEVRRFK---KLMQKAE 456
+D+P I YVHR GRT RAG+ G + + K LMQ+A
Sbjct: 487 FDLPNDIDDYVHRIGRTGRAGKMGLATAFFNDSNLSMAKPLADLMQEAN 535
>Medtr4g105100.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr4:43543552-43548350 | 20130731
Length = 625
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 100/418 (23%), Positives = 180/418 (43%), Gaps = 77/418 (18%)
Query: 43 LESMGISSLFPVQLAVWQETVGPGNFDRDLCVNSPTGSGKTLAYALPIVQMLSTRV---- 98
+ +G P+Q W + RDL + TGSGKTL+Y LP + +S +
Sbjct: 216 IAKLGFVEPTPIQAQGWPMAL----TGRDLIGIAETGSGKTLSYLLPAIVHVSAQPRLVQ 271
Query: 99 AKCLRALVVVPTRDLAFQVKRVFDGVASPLGLRVGLAVGQSSVADEISELVHVPAREAGS 158
+ LV+ PTR+LA Q+++ S +R G + +I +L
Sbjct: 272 GEGPVVLVLAPTRELAVQIQQEAMKFGSRSNIRCTCIYGGAPKGPQIRDL---------- 321
Query: 159 CYDPQHALFVRFESKVDILVATPGRLMDHINTTKGFTLEHLHYLVVDETDRLLREAYQSW 218
V+I++ATPGRL+D + + L+ + YLV+DE DR+L ++
Sbjct: 322 ------------RMGVEIVIATPGRLIDMLEA-QHTNLQRVTYLVLDEADRMLDMGFE-- 366
Query: 219 LPTVLELAQSNDDSFSQPADSFFPCSVGALRTRRRCGVERGFKDKPYPRLAKMVLSATIT 278
P + ++ V +R R+ + SAT
Sbjct: 367 -PQIRKI-------------------VNQIRPDRQT----------------LYWSATWP 390
Query: 279 QDPGKLVQLNLHLPLFLRAGQMRYRLPENLESYKLICETKVKPLYLVALLKS-LGGEKCI 337
++ L + LH P + G + +++ + K L+ LLK + G + +
Sbjct: 391 KEVESLARQFLHNPYKVVIGSPYLKANQSINQVVEVVTDMEKYNRLIKLLKEVMDGSRIL 450
Query: 338 VFTKSVESTHRLCKLL--NCFEDLQIDMKEYSGLQHQCVRSKTLTAFRKGEFQVLVSSDA 395
+FT++ + ++ + L + + L I G ++Q R L F+ G ++ ++D
Sbjct: 451 IFTETKKGCDQVTRQLRMDGWPALSI-----HGDKNQAERDWVLAEFKSGRSPIMTATDV 505
Query: 396 MTRGMDVEGVRNVINYDMPKYIKTYVHRAGRTARAGQTGRCFTLMSKDEVRRFKKLMQ 453
RG+DV+ ++ V+NYD P ++ YVHR GRT RAG G ++ + + + L++
Sbjct: 506 AARGLDVKDIKCVVNYDFPSSLEDYVHRIGRTGRAGAKGTAYSFFTSANAKYARDLIK 563
>Medtr2g100230.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr2:43035445-43041856 | 20130731
Length = 499
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 104/391 (26%), Positives = 170/391 (43%), Gaps = 75/391 (19%)
Query: 70 RDLCVNSPTGSGKTLAYALPIVQMLSTRV----AKCLRALVVVPTRDLAFQVKRVFDGVA 125
RDL + TGSGKTLAY LP + ++ + LV+ PTR+LA Q++
Sbjct: 133 RDLIGIAETGSGKTLAYLLPAIVHVNAQPILDPGDGPIVLVLAPTRELAVQIQ------- 185
Query: 126 SPLGLRVGLAVGQSSVADEISELVHVPAREAGSCYDPQHALFVR-FESKVDILVATPGRL 184
Q + S + G PQ VR + V+I++ATPGRL
Sbjct: 186 ------------QEATKFGASSRIKSTCIYGGVPKGPQ----VRDLQKGVEIIIATPGRL 229
Query: 185 MDHINTTKGFTLEHLHYLVVDETDRLLREAYQSWLPTVLELAQSNDDSFSQPADSFFPCS 244
+D + + L + YLV+DE DR+L + P + ++
Sbjct: 230 IDMLESNH-TNLRRVTYLVLDEADRMLDMGFD---PQIRKI------------------- 266
Query: 245 VGALRTRRRCGVERGFKDKPYPRLAKMVLSATITQDPGKLVQLNLHLPLFLRAGQMRYRL 304
V +R R+ + SAT ++ +L + L+ P + G +
Sbjct: 267 VSQIRPDRQT----------------LYWSATWPKEVEQLARQFLYNPYKVIIGSEDLKA 310
Query: 305 PENLESYKLICETKVKPLYLVALLKS-LGGEKCIVFTKSVESTHRLCKLL--NCFEDLQI 361
++ Y I K K LV LL+ + G + ++F + + ++ + L + + L I
Sbjct: 311 NHAIKQYVDIVPEKQKYDKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSI 370
Query: 362 DMKEYSGLQHQCVRSKTLTAFRKGEFQVLVSSDAMTRGMDVEGVRNVINYDMPKYIKTYV 421
G + Q R L+ F+ G+ ++ ++D RG+DV+ V+ VINYD P ++ YV
Sbjct: 371 -----HGDKSQAERDWVLSEFKSGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYV 425
Query: 422 HRAGRTARAGQTGRCFTLMSKDEVRRFKKLM 452
HR GRT RAG G +T + R K+L+
Sbjct: 426 HRIGRTGRAGAKGTAYTFFTAANARFAKELI 456
>Medtr4g059460.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr4:21899223-21892509 | 20130731
Length = 613
Score = 114 bits (285), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 112/442 (25%), Positives = 185/442 (41%), Gaps = 107/442 (24%)
Query: 70 RDLCVNSPTGSGKTLAYALPIVQMLSTRVAKCLR-----ALVVVPTRDLAFQVKRVFDGV 124
R VN+ TG+GKT+AY PI+ L + + R ALV+VPTR+L QV + +
Sbjct: 82 RHALVNAATGTGKTIAYLAPIIHHLQSYDKRVQRSDGTFALVLVPTRELCLQVHEILQKL 141
Query: 125 ASPLGLRV-GLAVGQSSVADEISELVHVPAREAGSCYDPQHALFVRFESKVDILVATPGR 183
V G +G S + E + R + IL+ATPGR
Sbjct: 142 LHRFHWIVPGYIMGGESRSKEKA----------------------RLRKGISILIATPGR 179
Query: 184 LMDHINTTKGFTLEHLHYLVVDETDRLLREAYQSWLPTVLELAQSNDDSFSQPADSFFPC 243
L+DH+ T F +L +++ DE DR+L + + +L L
Sbjct: 180 LLDHLKNTSSFVYTNLRWIIFDEADRILELGFGKEIQEILNL------------------ 221
Query: 244 SVGALRT---RRRCGVERGFKDKPYPRLAKMVLSATITQDPGKLVQLNLHLPLFLR---- 296
+G+++T + GV R K + R ++LSAT+ + L +++L P+ +
Sbjct: 222 -LGSMKTGHDDQESGVPRPSK---FQR-QNLLLSATLNEKVNHLAKISLEDPVMIGIDDK 276
Query: 297 ----AGQMR-----------------------YRLPENL-ESY-KLICETKVKPLYLVAL 327
++R Y++PE L + Y K+ C +++ L+++
Sbjct: 277 IMEPTSRIRFDNSDCDEDNEDTHSSKIPAIGAYKVPEQLIQRYMKVPCGSRLA--ILLSI 334
Query: 328 LKSL----GGEKCIVFTKSVESTHRLCKLLNCF--------ED------LQIDMKEYSGL 369
LK L +K ++F + ++ L+ F E+ L G
Sbjct: 335 LKHLFEREPSQKVVLFFSTCDAVDFHYSLITEFLFSSYPQTEEGNRTMFLGCKTLRLHGN 394
Query: 370 QHQCVRSKTLTAFRKGEFQVLVSSDAMTRGMDVEGVRNVINYDMPKYIKTYVHRAGRTAR 429
Q R+ + AF+ + +L+S+D RG+D VR +I YD P YVHR GRTAR
Sbjct: 395 MEQEDRTTSFQAFKTEKSALLLSTDVSARGLDFPNVRCIIQYDSPGEATEYVHRVGRTAR 454
Query: 430 AGQTGRCFTLMSKDEVRRFKKL 451
G+ G + E+ + L
Sbjct: 455 LGERGESLLFLQPSEIDYLQDL 476
>Medtr2g043360.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr2:18890321-18881902 | 20130731
Length = 610
Score = 114 bits (285), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 111/442 (25%), Positives = 183/442 (41%), Gaps = 107/442 (24%)
Query: 70 RDLCVNSPTGSGKTLAYALPIVQMLSTRVAKCLR-----ALVVVPTRDLAFQVKRVFDGV 124
R VN+ TG+GKT+AY PI+ L + + R ALV+VPTR+L QV + +
Sbjct: 79 RHALVNAATGTGKTIAYLAPIIHHLQSYDKRIQRSDGTFALVLVPTRELCLQVHEILQKL 138
Query: 125 ASPLGLRV-GLAVGQSSVADEISELVHVPAREAGSCYDPQHALFVRFESKVDILVATPGR 183
V G +G S + E + R + IL+ATPGR
Sbjct: 139 LHRFHWIVPGYIMGGESRSKEKA----------------------RLRKGISILIATPGR 176
Query: 184 LMDHINTTKGFTLEHLHYLVVDETDRLLREAYQSWLPTVLELAQSNDDSFSQPADSFFPC 243
L+DH+ T F +L +++ DE DR+L + + +L L
Sbjct: 177 LLDHLKNTSSFVYTNLRWIIFDEADRILELGFGKEIQEILNL------------------ 218
Query: 244 SVGALRTRRRCGVERGFKDKPYP---RLAKMVLSATITQDPGKLVQLNLHLPLFLR---- 296
+G+++T G + P P + ++LSAT+ + L +++L P+ +
Sbjct: 219 -LGSMKT----GHDDQGNGVPRPTKFQRQNLLLSATLNEKVNHLAKISLEDPVMIGIDDK 273
Query: 297 ----AGQMR-----------------------YRLPENL-ESY-KLICETKVKPLYLVAL 327
++R Y++PE L + Y K+ C +++ L+++
Sbjct: 274 VLEPTSKIRFDNSDCDEDNEGTYSSKIPAVGAYKVPEQLIQRYMKVPCGSRLA--ILLSI 331
Query: 328 LKSL----GGEKCIVFTKSVESTHRLCKLLNCF--------ED------LQIDMKEYSGL 369
LK L +K ++F + ++ LL F E+ L G
Sbjct: 332 LKHLFEREPSQKIVLFFSTCDAVDFHYSLLTEFLFSAFPQTEEGNRPMFLGCKTLRLHGN 391
Query: 370 QHQCVRSKTLTAFRKGEFQVLVSSDAMTRGMDVEGVRNVINYDMPKYIKTYVHRAGRTAR 429
Q R+ + AF+ + +L+S+D RG+D VR +I YD P YVHR GRTAR
Sbjct: 392 MEQEDRTTSFQAFKTEKSALLLSTDVSARGLDFPNVRCIIQYDSPGEATEYVHRVGRTAR 451
Query: 430 AGQTGRCFTLMSKDEVRRFKKL 451
G+ G + E+ + L
Sbjct: 452 LGERGESLLFLQPSEIEYLQDL 473
>Medtr4g114120.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr4:46980468-46984247 | 20130731
Length = 671
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 108/434 (24%), Positives = 182/434 (41%), Gaps = 78/434 (17%)
Query: 35 LHPKLKSALESMGISSLFPVQ-LAVWQETVGPGNFDRDLCVNSPTGSGKTLAYALPIVQ- 92
LH LK+ +E PVQ A+ G RDL + TGSGKT A+ PI+
Sbjct: 146 LHEDLKNNIERCKYVKPTPVQRYAIPIAVAG-----RDLMACAQTGSGKTAAFCFPIISG 200
Query: 93 MLSTRVAKCL--------------RALVVVPTRDLAFQVKRVFDGVASPLGLRVGLAVGQ 138
++ R+A L AL++ PTR+L+ Q+ A G+++ + G
Sbjct: 201 IMKERLASGLLPRGGGVDSDVAFPTALILSPTRELSCQIHAEACKFAHQTGVKIAVVYGG 260
Query: 139 SSVADEISELVHVPAREAGSCYDPQHALFVRFESKVDILVATPGRLMDHINTTKGFTLEH 198
+ + ++ L E VDILVATPGRL+D I + +L+
Sbjct: 261 APIGQQLRIL----------------------ERGVDILVATPGRLVDLIERER-VSLKK 297
Query: 199 LHYLVVDETDRLLREAYQSWLPTVLELAQSNDDSFSQPADSFFPCSVGALRTRRRCGVER 258
+ YL +DE DR+L ++ + +++ P D
Sbjct: 298 IKYLALDEADRMLDMGFEHQIRNIVQQMH-----MPPPGDR------------------- 333
Query: 259 GFKDKPYPRLAKMVLSATITQDPGKLVQLNLHLPLFLRAGQMRYRLPENLESYKLICETK 318
++ SAT + KL L +FL G++ ++ + + + +
Sbjct: 334 ----------QTLLFSATFPDNIQKLASDFLSNYVFLAVGRVGSSTELIVQKIESVQDME 383
Query: 319 VKPLYLVALLKSLGGEKCIVFTKSVESTHRLCKLLNCFEDLQIDMKEYSGLQHQCVRSKT 378
+ + L +++ K + VE+ L N + G + Q R +
Sbjct: 384 KRTRLVDLLRRNVVNGKLALTLVFVETKKGADALENWLCRINFPAIAIHGDKVQMERERA 443
Query: 379 LTAFRKGEFQVLVSSDAMTRGMDVEGVRNVINYDMPKYIKTYVHRAGRTARAGQTGRCFT 438
L +F++G ++V++D +RG+D+ V +VIN+D+P+ I YVHR GRT RAGQ+G
Sbjct: 444 LRSFKRGLTPIMVATDVASRGLDIPHVAHVINFDLPRDIDDYVHRIGRTGRAGQSGLATA 503
Query: 439 LMSKDEVRRFKKLM 452
S + K L+
Sbjct: 504 FFSTKNMPMAKSLV 517
>Medtr6g005550.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr6:822752-816182 | 20130731
Length = 718
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 108/425 (25%), Positives = 177/425 (41%), Gaps = 80/425 (18%)
Query: 43 LESMGISSLFPVQLAVWQETVGPGNFDRDLCVNSPTGSGKTLAYALPI---VQMLSTRVA 99
+++ G S+ P+Q W + +D+ + TGSGKTL Y LP ++ +
Sbjct: 179 VQNAGFSAPTPIQAQSWPIAL----QSKDIVAIAKTGSGKTLGYLLPAFIHLKRTNNNAK 234
Query: 100 KCLRALVVVPTRDLAFQVKRVFDGVASPLGLRVGLAVGQSSVADEISELVHVPAREAGSC 159
LV+ PTR+LA Q++ DE + +R A +C
Sbjct: 235 MGPTVLVLSPTRELATQIQ------------------------DEAVKFSKT-SRIACTC 269
Query: 160 Y---DPQHALFVRFESKVDILVATPGRLMDHINTTKGFTLEHLHYLVVDETDRLLREAYQ 216
P+ + DI+VATPGRL D + + +L + YLV+DE DR+L ++
Sbjct: 270 LYGGAPKGPQLKDIDRGADIVVATPGRLNDILEMRR-ISLHQVSYLVLDEADRMLDMGFE 328
Query: 217 SWLPTVLELAQSNDDSFSQPADSFFPCSVGALRTRRRCGVERGFKDKPYPRLAKMVLSAT 276
P + ++ V + RR+ ++ +AT
Sbjct: 329 ---PQIRKI-------------------VNGVPARRQT----------------LMFTAT 350
Query: 277 ITQDPGKLVQLNLHLPLFLRAGQMRYRLPENLESYKLICETKV-KPLYLVALLKSLG-GE 334
++ ++ L P+ + G + + + + T V K L +L+S G
Sbjct: 351 WPKEVRRIAADLLVNPVQVNIGNVDELVANKSITQHIEVLTYVEKQRRLETILRSQDQGS 410
Query: 335 KCIVFTKSVESTHRLCKLLNCFEDLQIDMKEYSGLQHQCVRSKTLTAFRKGEFQVLVSSD 394
K I+F ST ++C L Q G + Q R L FR G VLV++D
Sbjct: 411 KIIIFC----STKKMCDQLARNLTRQFGAAAIHGDKSQADRDHVLNQFRSGRTPVLVATD 466
Query: 395 AMTRGMDVEGVRNVINYDMPKYIKTYVHRAGRTARAGQTGRCFTLMSKDEVRRFKKLMQK 454
RG+DV+ +R V+N+D P ++ YVHR GRT RAG TG +T + + L++
Sbjct: 467 VAARGLDVKDIRVVVNFDFPTGVEDYVHRIGRTGRAGATGIAYTFFGDQDAKHASDLIKI 526
Query: 455 AEAGS 459
E +
Sbjct: 527 LEGAN 531
>Medtr6g005550.2 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr6:822752-816182 | 20130731
Length = 718
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 108/425 (25%), Positives = 177/425 (41%), Gaps = 80/425 (18%)
Query: 43 LESMGISSLFPVQLAVWQETVGPGNFDRDLCVNSPTGSGKTLAYALPI---VQMLSTRVA 99
+++ G S+ P+Q W + +D+ + TGSGKTL Y LP ++ +
Sbjct: 179 VQNAGFSAPTPIQAQSWPIAL----QSKDIVAIAKTGSGKTLGYLLPAFIHLKRTNNNAK 234
Query: 100 KCLRALVVVPTRDLAFQVKRVFDGVASPLGLRVGLAVGQSSVADEISELVHVPAREAGSC 159
LV+ PTR+LA Q++ DE + +R A +C
Sbjct: 235 MGPTVLVLSPTRELATQIQ------------------------DEAVKFSKT-SRIACTC 269
Query: 160 Y---DPQHALFVRFESKVDILVATPGRLMDHINTTKGFTLEHLHYLVVDETDRLLREAYQ 216
P+ + DI+VATPGRL D + + +L + YLV+DE DR+L ++
Sbjct: 270 LYGGAPKGPQLKDIDRGADIVVATPGRLNDILEMRR-ISLHQVSYLVLDEADRMLDMGFE 328
Query: 217 SWLPTVLELAQSNDDSFSQPADSFFPCSVGALRTRRRCGVERGFKDKPYPRLAKMVLSAT 276
P + ++ V + RR+ ++ +AT
Sbjct: 329 ---PQIRKI-------------------VNGVPARRQT----------------LMFTAT 350
Query: 277 ITQDPGKLVQLNLHLPLFLRAGQMRYRLPENLESYKLICETKV-KPLYLVALLKSLG-GE 334
++ ++ L P+ + G + + + + T V K L +L+S G
Sbjct: 351 WPKEVRRIAADLLVNPVQVNIGNVDELVANKSITQHIEVLTYVEKQRRLETILRSQDQGS 410
Query: 335 KCIVFTKSVESTHRLCKLLNCFEDLQIDMKEYSGLQHQCVRSKTLTAFRKGEFQVLVSSD 394
K I+F ST ++C L Q G + Q R L FR G VLV++D
Sbjct: 411 KIIIFC----STKKMCDQLARNLTRQFGAAAIHGDKSQADRDHVLNQFRSGRTPVLVATD 466
Query: 395 AMTRGMDVEGVRNVINYDMPKYIKTYVHRAGRTARAGQTGRCFTLMSKDEVRRFKKLMQK 454
RG+DV+ +R V+N+D P ++ YVHR GRT RAG TG +T + + L++
Sbjct: 467 VAARGLDVKDIRVVVNFDFPTGVEDYVHRIGRTGRAGATGIAYTFFGDQDAKHASDLIKI 526
Query: 455 AEAGS 459
E +
Sbjct: 527 LEGAN 531
>Medtr4g112340.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr4:46109502-46117199 | 20130731
Length = 583
Score = 113 bits (282), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 102/407 (25%), Positives = 167/407 (41%), Gaps = 77/407 (18%)
Query: 42 ALESMGISSLFPVQLAVWQETVGPGNFDRDLCVNSPTGSGKTLAYALPIVQMLST---RV 98
A+ MG L +Q + P +D+ + TGSGKTLA+ +P V++L
Sbjct: 110 AIVDMGFQHLTQIQ----ARAIPPLLSGKDVLGAARTGSGKTLAFLIPAVELLHKLKFNQ 165
Query: 99 AKCLRALVVVPTRDLAFQVKRVFDGVASPL--GLRVGLAVGQSSVADEISELVHVPAREA 156
+++ PTR+LA Q V + +GL +G S+ E L
Sbjct: 166 RSGTGVVIICPTRELAIQTHEVAQKLLKHHRHSQTLGLVIGGSARRTEAESLA------- 218
Query: 157 GSCYDPQHALFVRFESKVDILVATPGRLMDHINTTKGFTLEHLHYLVVDETDRLLREAYQ 216
++I+VATPGRL+DH+ TK F +L L++DE DR+L ++
Sbjct: 219 ---------------KGINIVVATPGRLLDHLQNTKRFIYNNLKCLIIDEADRILEANFE 263
Query: 217 SWLPTVLELAQSNDDSFSQPADSFFPCSVGALRTRRRCGVERGFKDKPYPRLAKMVLSAT 276
L +++L N R+ + + K LA++ T
Sbjct: 264 DELKQIIKLLPKN----------------------RQTALFSATQTKKVEDLARLSFQTT 301
Query: 277 ITQDPGKLVQLNLHLPLFLRAGQMRYRLPEN--LESYKLI-CETKVKPLYLVALLKSLGG 333
P+++ R ++ L+ Y ++ C + LY + LK
Sbjct: 302 ---------------PIYIDVDDGRKKVTNEGLLQGYVVVPCAKRFMVLY--SFLKRHKS 344
Query: 334 EKCIVFTKSVESTHRLCKLLNCFEDLQIDMKEYSGLQHQCVRSKTLTAFRKGEFQVLVSS 393
+K +VF S S + F + + G Q Q R+ T F + E +L+ +
Sbjct: 345 KKVMVFFSSCNSVKFHADI---FNHIHLHCSSIYGKQKQQTRTTTFVDFCQAEKGILLCT 401
Query: 394 DAMTRGMDVEGVRNVINYDMPKYIKTYVHRAGRTARAGQTGRCFTLM 440
D RG+D+ V ++ YD P K Y+HR GRTAR G+ G+ L+
Sbjct: 402 DVAARGLDIPSVDWILQYDPPDEPKEYIHRVGRTAR-GEDGKGNALL 447
>Medtr6g033070.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr6:10401560-10398230 | 20130731
Length = 538
Score = 112 bits (281), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 110/461 (23%), Positives = 200/461 (43%), Gaps = 102/461 (22%)
Query: 35 LHPKLKSALESMGISSLFPVQL-AVWQETVGPGNFDRDLCVNSPTGSGKTLAYALPIV-- 91
L KL +E+ G PVQ+ A+ VG +++ V + TGSGK+ ++ +PI+
Sbjct: 146 LPDKLLQNIEAAGYEMPTPVQMQAIPAALVG-----KNMLVLADTGSGKSASFLIPIISR 200
Query: 92 ----QMLSTRVAKCLRALVVVPTRDLAFQVKRVFDGVASPLGLRVGLAVGQSSVADEISE 147
+++ K A+V+ PTR+L+ QV+ + L + L VG ++A ++
Sbjct: 201 CASHRLMYVSDNKKPLAMVLTPTRELSIQVEEHAKLLGKGLPFKTALVVGGDAMARQL-- 258
Query: 148 LVHVPAREAGSCYDPQHALFVRFESKVDILVATPGRLMDHINTTKGFTLEHLHYLVVDET 207
R + V+++V TPGRL+D + T L+ + VVDE
Sbjct: 259 --------------------YRIQQGVELIVGTPGRLVDLL-TKNEIDLDDVTTFVVDEV 297
Query: 208 DRLLREAYQSWL---------PTVLELAQSNDDSFSQPADSFFPCSVGALRTRRRCGVER 258
D +L+ ++ + P VL + + DS + A+S +V
Sbjct: 298 DCMLQRGFRDQVLQIFTALSQPQVLMYSATTSDSLEKMANSMAKDTV------------- 344
Query: 259 GFKDKPYPRLAKMVLSATITQDPGKLVQLNLHLPLFLRAGQMRYRLPENLESYKLICETK 318
V++ P K V+ L +++ + Q + +L + L+S K
Sbjct: 345 -------------VITVGEPNRPNKAVK---QLAIWVESKQKKQKLFDILKSQK-----H 383
Query: 319 VKPLYLVALLKSLGGE---KCIVFTKSVESTHRLCKLLNCFEDLQIDMKEYSGLQHQCVR 375
KP ++ + LG + I + V++ G + R
Sbjct: 384 FKPPVVIYVGSRLGADLLANAITVSTGVKAV------------------SIHGEKSMTER 425
Query: 376 SKTLTAFRKGEFQVLVSSDAMTRGMDVEGVRNVINYDMPKYIKTYVHRAGRTARAGQTGR 435
+ + +F GEF V+V++ + RG+D+ GVR VI +DMP I YVH+ GR +R G+ G+
Sbjct: 426 REIMQSFMVGEFPVVVATGVLGRGVDLLGVRQVIVFDMPNSINEYVHQIGRASRMGEEGQ 485
Query: 436 CFTLMSKDEVRRFKKLMQKAEAGSCEEHILPSSLIDALHTT 476
++ + F +L+ ++G+ +P LI++ +TT
Sbjct: 486 AIVFVNDENKNVFPELVDVLKSGAAA---IPRELINSQYTT 523
>Medtr7g076820.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr7:28990557-28982494 | 20130731
Length = 523
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 106/402 (26%), Positives = 173/402 (43%), Gaps = 81/402 (20%)
Query: 71 DLCVNSPTGSGKTLAYALPIVQMLSTRVAKCLRALVVVPTRDLAFQVKRVFDGVASPLGL 130
D+ + G+GKT A+++P ++ + + ++ +++VPTR+LA Q +V + L +
Sbjct: 188 DILARAKNGTGKTAAFSIPALEKID-QDKNVIQVVILVPTRELALQTSQVCKELGKHLQI 246
Query: 131 RVGLAVGQSSVADEISELVHVPAREAGSCYDPQHALFVRFESKVDILVATPGRLMDHINT 190
+V + G +S+ D+I L Y P H +LV TPGR++D
Sbjct: 247 QVMVTTGGTSLKDDIMRL-----------YQPVH-----------LLVGTPGRILDL--A 282
Query: 191 TKGF-TLEHLHYLVVDETDRLLREAYQSWLPTVLELAQSNDDSFSQPADSFFPCSVGALR 249
KG L+ LV+DE D+LL ++ + +++ SN A FP +V
Sbjct: 283 KKGVCVLKDCSMLVMDEADKLLSPEFKPSIEQLIQFLPSNRQILLFSAT--FPVTVKDFN 340
Query: 250 TRRRCGVERGFKDKPYPRLAKMVLSATITQDPGKLVQLNLHLPLFLRAGQMRYRLPENLE 309
R + KPY +NL L L+ Y E E
Sbjct: 341 DR--------YLRKPYI--------------------INLMDELTLKGITQFYAFVE--E 370
Query: 310 SYKLICETKVKPLYLVALLKSLGGEKCIVFTKSVESTHRLCKLL-----NCFEDLQIDMK 364
K+ C L L L + I+F SV L K + +CF ++
Sbjct: 371 RQKVHC--------LNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQ 422
Query: 365 EYSGLQHQCVRSKTLTAFRKGEFQVLVSSDAMTRGMDVEGVRNVINYDMPKYIKTYVHRA 424
++ R++ FR G + LV +D TRG+D++ V VIN+D PK +TY+HR
Sbjct: 423 DH--------RNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRV 474
Query: 425 GRTARAGQTGRCFTLMSKDEVRRFKKLMQKAEAGSCEEHILP 466
GR+ R G G L++ ++ RF + E G+ + I P
Sbjct: 475 GRSGRFGHLGLAVNLVTYED--RFNLYRIEQELGTEIKQIPP 514
>Medtr7g076830.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr7:29001486-28993339 | 20130731
Length = 516
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 109/408 (26%), Positives = 176/408 (43%), Gaps = 93/408 (22%)
Query: 71 DLCVNSPTGSGKTLAYALPIVQMLSTRVAKCLRALVVVPTRDLAFQVKRVFDGVASPLGL 130
D+ + G+GKT A+++P ++ + + ++ +++VPTR+LA Q +V + L +
Sbjct: 181 DILARAKNGTGKTAAFSIPALEKID-QDNNIIQVVILVPTRELALQTSQVCKELGKHLQI 239
Query: 131 RVGLAVGQSSVADEISELVHVPAREAGSCYDPQHALFVRFESKVDILVATPGRLMDHINT 190
+V + G +S+ D+I L Y P H +LV TPGR++D
Sbjct: 240 QVMVTTGGTSLKDDIMRL-----------YQPVH-----------LLVGTPGRILDL--A 275
Query: 191 TKGF-TLEHLHYLVVDETDRLLREAYQSWLPTVLELAQSNDDSFSQPA------DSFFPC 243
KG L+ LV+DE D+LL +Q P++ +L Q F P + FP
Sbjct: 276 KKGVCVLKDCSMLVMDEADKLLSPEFQ---PSIEQLIQ-----FLPPTRQILMFSATFPV 327
Query: 244 SVGALRTRRRCGVERGFKDKPYPRLAKMVLSATITQDPGKLVQLNLHLPLFLRAGQMRYR 303
+V + R + KPY +NL L L+ Y
Sbjct: 328 TVKDFKDR--------YLRKPYI--------------------INLMDELTLKGITQFYA 359
Query: 304 LPENLESYKLICETKVKPLYLVALLKSLGGEKCIVFTKSVESTHRLCKLL-----NCFED 358
E E K+ C L L L + I+F SV L K + +CF
Sbjct: 360 FVE--ERQKVHC--------LNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYI 409
Query: 359 LQIDMKEYSGLQHQCVRSKTLTAFRKGEFQVLVSSDAMTRGMDVEGVRNVINYDMPKYIK 418
++++ R++ FR G + LV +D TRG+D++ V VIN+D PK +
Sbjct: 410 HAKMLQDH--------RNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSE 461
Query: 419 TYVHRAGRTARAGQTGRCFTLMSKDEVRRFKKLMQKAEAGSCEEHILP 466
TY+HR GR+ R G G L++ ++ RF + E G+ + I P
Sbjct: 462 TYLHRVGRSGRFGHLGLAVNLITYED--RFNLYRIEQELGTEIKQIPP 507
>Medtr7g076800.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr7:28977519-28970435 | 20130731
Length = 514
Score = 111 bits (278), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 109/408 (26%), Positives = 176/408 (43%), Gaps = 93/408 (22%)
Query: 71 DLCVNSPTGSGKTLAYALPIVQMLSTRVAKCLRALVVVPTRDLAFQVKRVFDGVASPLGL 130
D+ + G+GKT A+++P ++ + + ++ +++VPTR+LA Q +V + L +
Sbjct: 179 DILARAKNGTGKTAAFSIPALEKID-QDNNIIQVVILVPTRELALQTSQVCKELGKHLQI 237
Query: 131 RVGLAVGQSSVADEISELVHVPAREAGSCYDPQHALFVRFESKVDILVATPGRLMDHINT 190
+V + G +S+ D+I L Y P H +LV TPGR++D
Sbjct: 238 QVMVTTGGTSLKDDIMRL-----------YQPVH-----------LLVGTPGRILDL--A 273
Query: 191 TKGF-TLEHLHYLVVDETDRLLREAYQSWLPTVLELAQSNDDSFSQPA------DSFFPC 243
KG L+ LV+DE D+LL +Q P++ +L Q F P + FP
Sbjct: 274 KKGVCVLKDCSMLVMDEADKLLSPEFQ---PSIEQLIQ-----FLPPTRQILMFSATFPV 325
Query: 244 SVGALRTRRRCGVERGFKDKPYPRLAKMVLSATITQDPGKLVQLNLHLPLFLRAGQMRYR 303
+V + R + KPY +NL L L+ Y
Sbjct: 326 TVKDFKDR--------YLRKPYI--------------------INLMDELTLKGITQFYA 357
Query: 304 LPENLESYKLICETKVKPLYLVALLKSLGGEKCIVFTKSVESTHRLCKLL-----NCFED 358
E E K+ C L L L + I+F SV L K + +CF
Sbjct: 358 FVE--ERQKVHC--------LNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYI 407
Query: 359 LQIDMKEYSGLQHQCVRSKTLTAFRKGEFQVLVSSDAMTRGMDVEGVRNVINYDMPKYIK 418
++++ R++ FR G + LV +D TRG+D++ V VIN+D PK +
Sbjct: 408 HAKMLQDH--------RNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSE 459
Query: 419 TYVHRAGRTARAGQTGRCFTLMSKDEVRRFKKLMQKAEAGSCEEHILP 466
TY+HR GR+ R G G L++ ++ RF + E G+ + I P
Sbjct: 460 TYLHRVGRSGRFGHLGLAVNLITYED--RFNLYRIEQELGTEIKQIPP 505
>Medtr3g071620.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr3:32167186-32161537 | 20130731
Length = 589
Score = 110 bits (274), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 103/396 (26%), Positives = 164/396 (41%), Gaps = 80/396 (20%)
Query: 70 RDLCVNSPTGSGKTLAYALPIVQMLSTRVAK----CLRALVVVPTRDLAFQVKRVFDGVA 125
+D+ V++ TGSGKTLA+ +P+V++L + + +++ PTR+LA Q+ V
Sbjct: 53 KDVAVDAATGSGKTLAFVIPLVEILRRNASNPKPHQVLGVIISPTRELASQIYHVAQPFI 112
Query: 126 SPLG-LRVGLAVGQSSVADEISELVHVPAREAGSCYDPQHALFVRFESKVDILVATPGRL 184
S L ++ L VG V +I ++ E G+ ++L+ TPGRL
Sbjct: 113 STLANVKSMLLVGGVEVKADIKKI-----EEEGA----------------NVLIGTPGRL 151
Query: 185 MDHINTTKGFTLEHLHYLVVDETDRLLREAYQSWLPTVLELAQSNDDSFSQPADSFFPCS 244
D +N + L++DE DRLL +Q + +
Sbjct: 152 HDIMNRMDILDFKSFEILILDEADRLLDMGFQKQINAI---------------------- 189
Query: 245 VGALRTRRRCGVERGFKDKPYPRLAKMVLSATITQDPGKLVQLNLHLPLFLR-------- 296
+ L RR G+ SAT TQ +L + L P+ +
Sbjct: 190 ITELPKLRRTGL----------------FSATQTQAVEELAKAGLRNPVRVEVRAETKTA 233
Query: 297 ---AGQMRY---RLPENLESYKLICETKVKPLYLVALLKSLGGEKCIVFTKSVESTHRLC 350
A + + P L+ L CE KP LV L +K I++ +
Sbjct: 234 NDSASSKKIESSKTPSGLQIEYLECEADKKPSQLVDFLVKNRSKKIIIYFMTCACVDYWG 293
Query: 351 KLLNCFEDLQ-IDMKEYSGLQHQCVRSKTLTAFRKGEFQVLVSSDAMTRGMDVEGVRNVI 409
+L L+ + G Q VR K LT+F +L+ +D RG+D+ GV ++
Sbjct: 294 LVLPRLSVLKGFSLISLHGKMKQSVREKALTSFTSLSNGILLCTDVAARGLDIPGVDCIV 353
Query: 410 NYDMPKYIKTYVHRAGRTARAGQTGRCFT-LMSKDE 444
YD P+ +VHR GRTAR G+ G L+ K+E
Sbjct: 354 QYDPPQDPNVFVHRVGRTARLGKQGHAVVFLLPKEE 389
>Medtr5g069330.1 | DEAD-box ATP-dependent RNA helicase | LC |
chr5:29382234-29375756 | 20130731
Length = 417
Score = 107 bits (266), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 92/360 (25%), Positives = 153/360 (42%), Gaps = 65/360 (18%)
Query: 71 DLCVNSPTGSGKTLAYALPIVQML--STRVAKCLRALVVVPTRDLAFQVKRVFDGVASPL 128
D+ SP SGK A+ LPI+Q L + A V+ P+RDL F++ F + S
Sbjct: 42 DVIGISPPRSGKAGAFVLPILQALLEAGPNLNTSFACVLSPSRDLVFRIAEYFQVLGSQF 101
Query: 129 GLRVGLAVGQSSVADEISELVHVPAREAGSCYDPQHALFVRFESKVDILVATPGRLMDHI 188
G++ V + + D+ ++++ P ++V T ++ H+
Sbjct: 102 GVKCATLVEANDIIDQTNQILQQP----------------------HLIVGTLRQVFYHL 139
Query: 189 NTTKGFTLEHLHYLVVDETDRLLREAYQSWLPTVLELAQSNDDSFSQPADSFFPCSVGAL 248
T+GF+L L YLV+ E D LL + + E Q ND + +
Sbjct: 140 RLTQGFSLARLKYLVIHEADLLLNDQF--------EEQQLND-------------ILSII 178
Query: 249 RTRRRCGVERGFKDKPYPRLAKMVLSATITQDPGKLVQLNLHLPLFLRAGQMRYRLPENL 308
+ RR + S+T+T+ + +L+L PL + + L
Sbjct: 179 PSERRT----------------FLFSSTMTEKVHMIQRLSLRNPLKIDVSSKYSTVVTQL 222
Query: 309 ESYKLICETKVKPLYLVALLKSLGGEKCIVFTKSVESTHRLCKLLNCFEDLQIDMKEYSG 368
+ +K YLV +L + G K VFT++ S L +L + I + Y
Sbjct: 223 QQ-SCFMPAMLKDCYLVYILTEMTGRKSTVFTQTCGSAFLLALILKNLDFRAIPIISY-- 279
Query: 369 LQHQCVRSKTLTAFRKGEFQVLVSSDAMTRGMDVEGVRNVINYDMPKYIKTYVHRAGRTA 428
Q + L AF+ G+F +L+ S+A RG+D+ V VINY++P+ Y+HR G T
Sbjct: 280 -MSQAKKLGALNAFKSGKFNILLCSEAARRGLDIPAVDMVINYNIPRDPNDYMHRVGWTG 338
>Medtr5g069330.4 | DEAD-box ATP-dependent RNA helicase | LC |
chr5:29382212-29375908 | 20130731
Length = 417
Score = 107 bits (266), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 92/360 (25%), Positives = 153/360 (42%), Gaps = 65/360 (18%)
Query: 71 DLCVNSPTGSGKTLAYALPIVQML--STRVAKCLRALVVVPTRDLAFQVKRVFDGVASPL 128
D+ SP SGK A+ LPI+Q L + A V+ P+RDL F++ F + S
Sbjct: 42 DVIGISPPRSGKAGAFVLPILQALLEAGPNLNTSFACVLSPSRDLVFRIAEYFQVLGSQF 101
Query: 129 GLRVGLAVGQSSVADEISELVHVPAREAGSCYDPQHALFVRFESKVDILVATPGRLMDHI 188
G++ V + + D+ ++++ P ++V T ++ H+
Sbjct: 102 GVKCATLVEANDIIDQTNQILQQP----------------------HLIVGTLRQVFYHL 139
Query: 189 NTTKGFTLEHLHYLVVDETDRLLREAYQSWLPTVLELAQSNDDSFSQPADSFFPCSVGAL 248
T+GF+L L YLV+ E D LL + + E Q ND + +
Sbjct: 140 RLTQGFSLARLKYLVIHEADLLLNDQF--------EEQQLND-------------ILSII 178
Query: 249 RTRRRCGVERGFKDKPYPRLAKMVLSATITQDPGKLVQLNLHLPLFLRAGQMRYRLPENL 308
+ RR + S+T+T+ + +L+L PL + + L
Sbjct: 179 PSERRT----------------FLFSSTMTEKVHMIQRLSLRNPLKIDVSSKYSTVVTQL 222
Query: 309 ESYKLICETKVKPLYLVALLKSLGGEKCIVFTKSVESTHRLCKLLNCFEDLQIDMKEYSG 368
+ +K YLV +L + G K VFT++ S L +L + I + Y
Sbjct: 223 QQ-SCFMPAMLKDCYLVYILTEMTGRKSTVFTQTCGSAFLLALILKNLDFRAIPIISY-- 279
Query: 369 LQHQCVRSKTLTAFRKGEFQVLVSSDAMTRGMDVEGVRNVINYDMPKYIKTYVHRAGRTA 428
Q + L AF+ G+F +L+ S+A RG+D+ V VINY++P+ Y+HR G T
Sbjct: 280 -MSQAKKLGALNAFKSGKFNILLCSEAARRGLDIPAVDMVINYNIPRDPNDYMHRVGWTG 338
>Medtr5g069330.2 | DEAD-box ATP-dependent RNA helicase | LC |
chr5:29382234-29375756 | 20130731
Length = 417
Score = 107 bits (266), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 92/360 (25%), Positives = 153/360 (42%), Gaps = 65/360 (18%)
Query: 71 DLCVNSPTGSGKTLAYALPIVQML--STRVAKCLRALVVVPTRDLAFQVKRVFDGVASPL 128
D+ SP SGK A+ LPI+Q L + A V+ P+RDL F++ F + S
Sbjct: 42 DVIGISPPRSGKAGAFVLPILQALLEAGPNLNTSFACVLSPSRDLVFRIAEYFQVLGSQF 101
Query: 129 GLRVGLAVGQSSVADEISELVHVPAREAGSCYDPQHALFVRFESKVDILVATPGRLMDHI 188
G++ V + + D+ ++++ P ++V T ++ H+
Sbjct: 102 GVKCATLVEANDIIDQTNQILQQP----------------------HLIVGTLRQVFYHL 139
Query: 189 NTTKGFTLEHLHYLVVDETDRLLREAYQSWLPTVLELAQSNDDSFSQPADSFFPCSVGAL 248
T+GF+L L YLV+ E D LL + + E Q ND + +
Sbjct: 140 RLTQGFSLARLKYLVIHEADLLLNDQF--------EEQQLND-------------ILSII 178
Query: 249 RTRRRCGVERGFKDKPYPRLAKMVLSATITQDPGKLVQLNLHLPLFLRAGQMRYRLPENL 308
+ RR + S+T+T+ + +L+L PL + + L
Sbjct: 179 PSERRT----------------FLFSSTMTEKVHMIQRLSLRNPLKIDVSSKYSTVVTQL 222
Query: 309 ESYKLICETKVKPLYLVALLKSLGGEKCIVFTKSVESTHRLCKLLNCFEDLQIDMKEYSG 368
+ +K YLV +L + G K VFT++ S L +L + I + Y
Sbjct: 223 QQ-SCFMPAMLKDCYLVYILTEMTGRKSTVFTQTCGSAFLLALILKNLDFRAIPIISY-- 279
Query: 369 LQHQCVRSKTLTAFRKGEFQVLVSSDAMTRGMDVEGVRNVINYDMPKYIKTYVHRAGRTA 428
Q + L AF+ G+F +L+ S+A RG+D+ V VINY++P+ Y+HR G T
Sbjct: 280 -MSQAKKLGALNAFKSGKFNILLCSEAARRGLDIPAVDMVINYNIPRDPNDYMHRVGWTG 338
>Medtr5g069330.3 | DEAD-box ATP-dependent RNA helicase | LC |
chr5:29382234-29375756 | 20130731
Length = 421
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 92/360 (25%), Positives = 153/360 (42%), Gaps = 65/360 (18%)
Query: 71 DLCVNSPTGSGKTLAYALPIVQML--STRVAKCLRALVVVPTRDLAFQVKRVFDGVASPL 128
D+ SP SGK A+ LPI+Q L + A V+ P+RDL F++ F + S
Sbjct: 46 DVIGISPPRSGKAGAFVLPILQALLEAGPNLNTSFACVLSPSRDLVFRIAEYFQVLGSQF 105
Query: 129 GLRVGLAVGQSSVADEISELVHVPAREAGSCYDPQHALFVRFESKVDILVATPGRLMDHI 188
G++ V + + D+ ++++ P ++V T ++ H+
Sbjct: 106 GVKCATLVEANDIIDQTNQILQQP----------------------HLIVGTLRQVFYHL 143
Query: 189 NTTKGFTLEHLHYLVVDETDRLLREAYQSWLPTVLELAQSNDDSFSQPADSFFPCSVGAL 248
T+GF+L L YLV+ E D LL + + E Q ND + +
Sbjct: 144 RLTQGFSLARLKYLVIHEADLLLNDQF--------EEQQLND-------------ILSII 182
Query: 249 RTRRRCGVERGFKDKPYPRLAKMVLSATITQDPGKLVQLNLHLPLFLRAGQMRYRLPENL 308
+ RR + S+T+T+ + +L+L PL + + L
Sbjct: 183 PSERRT----------------FLFSSTMTEKVHMIQRLSLRNPLKIDVSSKYSTVVTQL 226
Query: 309 ESYKLICETKVKPLYLVALLKSLGGEKCIVFTKSVESTHRLCKLLNCFEDLQIDMKEYSG 368
+ +K YLV +L + G K VFT++ S L +L + I + Y
Sbjct: 227 QQ-SCFMPAMLKDCYLVYILTEMTGRKSTVFTQTCGSAFLLALILKNLDFRAIPIISY-- 283
Query: 369 LQHQCVRSKTLTAFRKGEFQVLVSSDAMTRGMDVEGVRNVINYDMPKYIKTYVHRAGRTA 428
Q + L AF+ G+F +L+ S+A RG+D+ V VINY++P+ Y+HR G T
Sbjct: 284 -MSQAKKLGALNAFKSGKFNILLCSEAARRGLDIPAVDMVINYNIPRDPNDYMHRVGWTG 342
>Medtr5g069330.5 | DEAD-box ATP-dependent RNA helicase | LC |
chr5:29382234-29375756 | 20130731
Length = 421
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 92/360 (25%), Positives = 153/360 (42%), Gaps = 65/360 (18%)
Query: 71 DLCVNSPTGSGKTLAYALPIVQML--STRVAKCLRALVVVPTRDLAFQVKRVFDGVASPL 128
D+ SP SGK A+ LPI+Q L + A V+ P+RDL F++ F + S
Sbjct: 46 DVIGISPPRSGKAGAFVLPILQALLEAGPNLNTSFACVLSPSRDLVFRIAEYFQVLGSQF 105
Query: 129 GLRVGLAVGQSSVADEISELVHVPAREAGSCYDPQHALFVRFESKVDILVATPGRLMDHI 188
G++ V + + D+ ++++ P ++V T ++ H+
Sbjct: 106 GVKCATLVEANDIIDQTNQILQQP----------------------HLIVGTLRQVFYHL 143
Query: 189 NTTKGFTLEHLHYLVVDETDRLLREAYQSWLPTVLELAQSNDDSFSQPADSFFPCSVGAL 248
T+GF+L L YLV+ E D LL + + E Q ND + +
Sbjct: 144 RLTQGFSLARLKYLVIHEADLLLNDQF--------EEQQLND-------------ILSII 182
Query: 249 RTRRRCGVERGFKDKPYPRLAKMVLSATITQDPGKLVQLNLHLPLFLRAGQMRYRLPENL 308
+ RR + S+T+T+ + +L+L PL + + L
Sbjct: 183 PSERRT----------------FLFSSTMTEKVHMIQRLSLRNPLKIDVSSKYSTVVTQL 226
Query: 309 ESYKLICETKVKPLYLVALLKSLGGEKCIVFTKSVESTHRLCKLLNCFEDLQIDMKEYSG 368
+ +K YLV +L + G K VFT++ S L +L + I + Y
Sbjct: 227 QQ-SCFMPAMLKDCYLVYILTEMTGRKSTVFTQTCGSAFLLALILKNLDFRAIPIISY-- 283
Query: 369 LQHQCVRSKTLTAFRKGEFQVLVSSDAMTRGMDVEGVRNVINYDMPKYIKTYVHRAGRTA 428
Q + L AF+ G+F +L+ S+A RG+D+ V VINY++P+ Y+HR G T
Sbjct: 284 -MSQAKKLGALNAFKSGKFNILLCSEAARRGLDIPAVDMVINYNIPRDPNDYMHRVGWTG 342
>Medtr2g039960.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr2:17536994-17532829 | 20130731
Length = 413
Score = 106 bits (264), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 106/422 (25%), Positives = 183/422 (43%), Gaps = 78/422 (18%)
Query: 57 AVWQETVGPGNFDRDLCVNSPTGSGKTLAYALPIVQMLSTRVAKCLRALVVVPTRDLAFQ 116
A+ Q + P D+ + +G+GKT + I+Q L V +C +ALV+ PTR+LA Q
Sbjct: 65 AIQQRGIVPFIKGLDVIQQAQSGTGKTATFCSGILQQLDYSVTEC-QALVLAPTRELAQQ 123
Query: 117 VKRVFDGVASPLGLRVGLAVGQSSVADEISELVHVPAREAGSCYDPQHALFVRFESKVDI 176
+++V + LG++V VG +SV ++ Q L S V +
Sbjct: 124 IEKVMRALGDYLGVKVHACVGGTSVRED------------------QRIL----SSGVHV 161
Query: 177 LVATPGRLMDHINTTKGFTLEHLHYLVVDETDRLLREAYQSWLPTVLELAQSNDDSFSQP 236
+V TPGR+ D + + +++ V+DE D +L ++ + + +L S
Sbjct: 162 VVGTPGRVFDMLRR-QSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPSK------- 213
Query: 237 ADSFFPCSVGALRTR---RRCGVERGFKDKPYPRLAKMVLSATITQDPGKLVQLNLHLPL 293
VG + R F +KP L K +D +L L
Sbjct: 214 ------IQVGVFSATMPPEALEITRKFMNKPVRILVK--------RD-----ELTLE--- 251
Query: 294 FLRAGQMRYRLPENLESYKL--ICETKVKPLYLVALLKSLGGEKCIVFTKSVESTHRLCK 351
G ++ + + E +KL +C+ L ++L + ++F V + ++
Sbjct: 252 ----GIKQFYVNVDKEEWKLDTLCD----------LYETLAITQSVIF---VNTRRKVDW 294
Query: 352 LLNCFEDLQIDMKEYSGLQHQCVRSKTLTAFRKGEFQVLVSSDAMTRGMDVEGVRNVINY 411
L + + G Q R + FR G +VL+++D + RG+DV+ V VINY
Sbjct: 295 LTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINY 354
Query: 412 DMPKYIKTYVHRAGRTARAGQTGRCFTLMSKDEVRRFKKLMQKAEAGSCEEHILPSSLID 471
D+P + Y+HR GR+ R G+ G ++ D+ R + QK EE LPS++ +
Sbjct: 355 DLPTQPENYLHRIGRSGRFGRKGVAINFVTTDDERMLSDI-QKFYNVLIEE--LPSNVAE 411
Query: 472 AL 473
L
Sbjct: 412 LL 413
>Medtr7g109720.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr7:44909506-44914537 | 20130731
Length = 775
Score = 105 bits (263), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 96/388 (24%), Positives = 172/388 (44%), Gaps = 80/388 (20%)
Query: 70 RDLCVNSPTGSGKTLAYALP-IVQMLST---RVAKCLRALVVVPTRDLAFQVKRVFDGVA 125
RD+ + TGSGKT A+ LP IV ++ + + ++ PTR+LA Q+ A
Sbjct: 269 RDIIGIAKTGSGKTAAFVLPMIVHIMDQPELQKEEGPIGVICAPTRELAHQIYLEAKKFA 328
Query: 126 SPLGLRVGLAVGQSSVADEISELVHVPAREAGSCYDPQHALFVRFESKVDILVATPGRLM 185
G+RV G S ++ EL +AG C +I+VATPGRL+
Sbjct: 329 KAYGIRVSAVYGGMSKLEQFKEL------KAG-C---------------EIVVATPGRLI 366
Query: 186 DHINTTKGFTLEHLHYLVVDETDRLLREAYQSWLPTVLELAQSNDDSFSQPADSFFPCSV 245
D + K + YLV+DE DR+ ++ + ++ V
Sbjct: 367 DMLKM-KALAMLRATYLVLDEADRMFDLGFEPQVRSI----------------------V 403
Query: 246 GALRTRRRCGVERGFKDKPYPRLAKMVLSATITQDPGKLVQLNLHLPLFLRAGQMRYRLP 305
G +R R+ ++ SAT+ + KL + L P+ + G++
Sbjct: 404 GQIRPDRQT----------------LLFSATMPRKVEKLAREILSDPIRVTVGEVGMANE 447
Query: 306 ENLESYKLI-CETKVKPLYLVALLKSLGGEKCIVFTKSVESTHRLCKLLNCFEDLQIDMK 364
+ + ++I +++ P L L + + +VF + + ++Q+ +
Sbjct: 448 DITQVVQVIPSDSEKLPWLLEKLHEMIDQGDTLVFASKKATVDEI--------EVQLGQR 499
Query: 365 EYS-----GLQHQCVRSKTLTAFRKGEFQVLVSSDAMTRGMDVEGVRNVINYDMPKYIKT 419
+ G + Q R L F+ G + VL+++D RG+D++ ++ V+N+D+ K +
Sbjct: 500 GFKVAALHGDKDQSSRMDILQKFKSGAYHVLIATDVAARGLDIKSIKTVVNFDIAKDMDM 559
Query: 420 YVHRAGRTARAG-QTGRCFTLMSKDEVR 446
+VHR GRT RAG + G +TL+++ E R
Sbjct: 560 HVHRIGRTGRAGDKDGVAYTLITQKEAR 587
>Medtr7g100820.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr7:40632868-40627375 | 20130731
Length = 619
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 98/406 (24%), Positives = 174/406 (42%), Gaps = 74/406 (18%)
Query: 69 DRDLCVNSPTGSGKTLAYALPIVQMLSTRVAKCLRALVVVPTRDLAFQVKRVFDGVASPL 128
DR+ +PTGSGKTLA+ P++ L +RA+++ +R+L+ Q R +A
Sbjct: 170 DRECFACAPTGSGKTLAFVCPMLMKLKAHAKGGVRAVIICHSRELSGQTYRECKKLAKGE 229
Query: 129 GLRVGLAVGQSSVADEISELVHVPAREAGSCYDPQHALFVRFESKVDILVATPGRLMDHI 188
R+ L L+ ++A F +F DIL++TP RL I
Sbjct: 230 KFRIKLMTKN---------LL-------------RNADFSKFS--CDILISTPLRLCLAI 265
Query: 189 NTTKGFTLEHLHYLVVDETDRLLREAYQSWLPTVLELAQSNDDSFSQPADSFFPCSVGAL 248
K L + YLV+DE+D+L + ++++ +
Sbjct: 266 KKKK-VDLSRVEYLVLDESDKLFEPQLFKQIDSIIKACTN-------------------- 304
Query: 249 RTRRRCGVERGFKDKPYPRLAKMVLSATITQDPGKLVQLNLHLPLFLRAGQMRYRLPENL 308
P + + + SAT+ + +H + + G R + +
Sbjct: 305 -----------------PSIIRSLFSATLPDFVEDRARELMHDAVRVIVG--RKNMASDT 345
Query: 309 ESYKLICETKVKPLYLVALLKSLG---GEKCIVFTKSVESTHRLCKLLNCFEDLQIDMKE 365
KL+ T + L+A+ +S +VF +S E L L F+++++D+
Sbjct: 346 IKQKLVF-TGSEEGKLLAIRQSFAESLNPPVLVFLQSKERAKELYGEL-AFDNIRVDVIH 403
Query: 366 YSGLQHQCVRSKTLTAFRKGEFQVLVSSDAMTRGMDVEGVRNVINYDMPKYIKTYVHRAG 425
Q + R + FR G+ VL+++D + RGMD +G+ VINYD P Y+HR G
Sbjct: 404 SDLSQEE--RENAVDNFRAGKTWVLIATDVVARGMDFKGINCVINYDFPDSASAYIHRIG 461
Query: 426 RTARAGQTGRCFTLMSKDEVRRFKKLMQKAEAGSCEEHILPSSLID 471
R+ RAG++G T +++++ + + + CE +PS L +
Sbjct: 462 RSGRAGRSGEAITFYTEEDIPFLRNVSNLMASSGCE---VPSWLTE 504
>Medtr2g007000.4 | DEAD-box RNA helicase family protein | HC |
chr2:778196-784023 | 20130731
Length = 1114
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 112/418 (26%), Positives = 181/418 (43%), Gaps = 96/418 (22%)
Query: 70 RDLCVNSPTGSGKTLAYALPIVQMLSTR----VAKCLRALVVVPTRDLAFQVKRVFDGVA 125
RD + TGSGKTLA+ LP+++ + + V L++ PTR+L Q+
Sbjct: 541 RDCIGVAKTGSGKTLAFVLPMLRHIKDQPPVVVGDGPIGLIMAPTRELVQQIHSDIRKFT 600
Query: 126 SPLGLRVGLAVGQSSVADEISELVHVPAREAGSCYDPQHALFVRFESKVDILVATPGRLM 185
+G+R G S VA +ISEL + +I+V TPGR++
Sbjct: 601 KVMGIRCVPVYGGSGVAQQISEL----------------------KRGTEIVVCTPGRMI 638
Query: 186 DHINTTKG--FTLEHLHYLVVDETDRLLREAYQSWLPTVLELAQSNDDSFSQPADSFFPC 243
D + T+ G L + YLV+DE DR+ ++ P + + Q+
Sbjct: 639 DILCTSSGKITNLRRVTYLVMDEADRMFDMGFE---PQITRIVQN--------------- 680
Query: 244 SVGALRTRRRCGVERGFKDKPYPRLAKMVLSATITQDPGKLVQLNLHLPLFLRAGQMRYR 303
+R R+ ++ SAT + L + L+ P+ ++ G R
Sbjct: 681 ----IRPDRQT----------------VLFSATFPRQVEILARKVLNKPVEIQVGG---R 717
Query: 304 LPENLESYKLICETKVKPLYLVALLKSLG-GE-----KCIVFTKSVESTHRLCKLLNCFE 357
N + +L+ +V+P L GE K +VF S + C L F+
Sbjct: 718 SVVNKDIAQLV---EVRPENERFLRLLELLGEWYEKGKILVFVHSQDK----CDAL--FK 768
Query: 358 DLQIDMKE------YSGLQHQCVRSKTLTAFRKGEFQVLVSSDAMTRGMDVEGVRNVINY 411
DL MK G + Q R T++ F+ +LV++ RG+DV+ + VIN+
Sbjct: 769 DL---MKHGYPCLSLHGAKDQTDRESTISDFKSNVCNLLVATSIAARGLDVKELELVINF 825
Query: 412 DMPKYIKTYVHRAGRTARAGQTGRCFTLMSKDEVRRFKKLMQKAEAGSCEEHILPSSL 469
D+P + + YVHR GRT RAG+ G T +S+++ R L++ E E I+P L
Sbjct: 826 DVPNHYEDYVHRVGRTGRAGRKGCAITFISEEDARYAPDLVKALE---LSEQIVPDDL 880
>Medtr2g007000.8 | DEAD-box RNA helicase family protein | HC |
chr2:778196-784007 | 20130731
Length = 1114
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 112/418 (26%), Positives = 181/418 (43%), Gaps = 96/418 (22%)
Query: 70 RDLCVNSPTGSGKTLAYALPIVQMLSTR----VAKCLRALVVVPTRDLAFQVKRVFDGVA 125
RD + TGSGKTLA+ LP+++ + + V L++ PTR+L Q+
Sbjct: 541 RDCIGVAKTGSGKTLAFVLPMLRHIKDQPPVVVGDGPIGLIMAPTRELVQQIHSDIRKFT 600
Query: 126 SPLGLRVGLAVGQSSVADEISELVHVPAREAGSCYDPQHALFVRFESKVDILVATPGRLM 185
+G+R G S VA +ISEL + +I+V TPGR++
Sbjct: 601 KVMGIRCVPVYGGSGVAQQISEL----------------------KRGTEIVVCTPGRMI 638
Query: 186 DHINTTKG--FTLEHLHYLVVDETDRLLREAYQSWLPTVLELAQSNDDSFSQPADSFFPC 243
D + T+ G L + YLV+DE DR+ ++ P + + Q+
Sbjct: 639 DILCTSSGKITNLRRVTYLVMDEADRMFDMGFE---PQITRIVQN--------------- 680
Query: 244 SVGALRTRRRCGVERGFKDKPYPRLAKMVLSATITQDPGKLVQLNLHLPLFLRAGQMRYR 303
+R R+ ++ SAT + L + L+ P+ ++ G R
Sbjct: 681 ----IRPDRQT----------------VLFSATFPRQVEILARKVLNKPVEIQVGG---R 717
Query: 304 LPENLESYKLICETKVKPLYLVALLKSLG-GE-----KCIVFTKSVESTHRLCKLLNCFE 357
N + +L+ +V+P L GE K +VF S + C L F+
Sbjct: 718 SVVNKDIAQLV---EVRPENERFLRLLELLGEWYEKGKILVFVHSQDK----CDAL--FK 768
Query: 358 DLQIDMKE------YSGLQHQCVRSKTLTAFRKGEFQVLVSSDAMTRGMDVEGVRNVINY 411
DL MK G + Q R T++ F+ +LV++ RG+DV+ + VIN+
Sbjct: 769 DL---MKHGYPCLSLHGAKDQTDRESTISDFKSNVCNLLVATSIAARGLDVKELELVINF 825
Query: 412 DMPKYIKTYVHRAGRTARAGQTGRCFTLMSKDEVRRFKKLMQKAEAGSCEEHILPSSL 469
D+P + + YVHR GRT RAG+ G T +S+++ R L++ E E I+P L
Sbjct: 826 DVPNHYEDYVHRVGRTGRAGRKGCAITFISEEDARYAPDLVKALE---LSEQIVPDDL 880
>Medtr2g007000.6 | DEAD-box RNA helicase family protein | HC |
chr2:778236-784007 | 20130731
Length = 1114
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 112/418 (26%), Positives = 181/418 (43%), Gaps = 96/418 (22%)
Query: 70 RDLCVNSPTGSGKTLAYALPIVQMLSTR----VAKCLRALVVVPTRDLAFQVKRVFDGVA 125
RD + TGSGKTLA+ LP+++ + + V L++ PTR+L Q+
Sbjct: 541 RDCIGVAKTGSGKTLAFVLPMLRHIKDQPPVVVGDGPIGLIMAPTRELVQQIHSDIRKFT 600
Query: 126 SPLGLRVGLAVGQSSVADEISELVHVPAREAGSCYDPQHALFVRFESKVDILVATPGRLM 185
+G+R G S VA +ISEL + +I+V TPGR++
Sbjct: 601 KVMGIRCVPVYGGSGVAQQISEL----------------------KRGTEIVVCTPGRMI 638
Query: 186 DHINTTKG--FTLEHLHYLVVDETDRLLREAYQSWLPTVLELAQSNDDSFSQPADSFFPC 243
D + T+ G L + YLV+DE DR+ ++ P + + Q+
Sbjct: 639 DILCTSSGKITNLRRVTYLVMDEADRMFDMGFE---PQITRIVQN--------------- 680
Query: 244 SVGALRTRRRCGVERGFKDKPYPRLAKMVLSATITQDPGKLVQLNLHLPLFLRAGQMRYR 303
+R R+ ++ SAT + L + L+ P+ ++ G R
Sbjct: 681 ----IRPDRQT----------------VLFSATFPRQVEILARKVLNKPVEIQVGG---R 717
Query: 304 LPENLESYKLICETKVKPLYLVALLKSLG-GE-----KCIVFTKSVESTHRLCKLLNCFE 357
N + +L+ +V+P L GE K +VF S + C L F+
Sbjct: 718 SVVNKDIAQLV---EVRPENERFLRLLELLGEWYEKGKILVFVHSQDK----CDAL--FK 768
Query: 358 DLQIDMKE------YSGLQHQCVRSKTLTAFRKGEFQVLVSSDAMTRGMDVEGVRNVINY 411
DL MK G + Q R T++ F+ +LV++ RG+DV+ + VIN+
Sbjct: 769 DL---MKHGYPCLSLHGAKDQTDRESTISDFKSNVCNLLVATSIAARGLDVKELELVINF 825
Query: 412 DMPKYIKTYVHRAGRTARAGQTGRCFTLMSKDEVRRFKKLMQKAEAGSCEEHILPSSL 469
D+P + + YVHR GRT RAG+ G T +S+++ R L++ E E I+P L
Sbjct: 826 DVPNHYEDYVHRVGRTGRAGRKGCAITFISEEDARYAPDLVKALE---LSEQIVPDDL 880
>Medtr2g007000.2 | DEAD-box RNA helicase family protein | HC |
chr2:778196-784007 | 20130731
Length = 1114
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 112/418 (26%), Positives = 181/418 (43%), Gaps = 96/418 (22%)
Query: 70 RDLCVNSPTGSGKTLAYALPIVQMLSTR----VAKCLRALVVVPTRDLAFQVKRVFDGVA 125
RD + TGSGKTLA+ LP+++ + + V L++ PTR+L Q+
Sbjct: 541 RDCIGVAKTGSGKTLAFVLPMLRHIKDQPPVVVGDGPIGLIMAPTRELVQQIHSDIRKFT 600
Query: 126 SPLGLRVGLAVGQSSVADEISELVHVPAREAGSCYDPQHALFVRFESKVDILVATPGRLM 185
+G+R G S VA +ISEL + +I+V TPGR++
Sbjct: 601 KVMGIRCVPVYGGSGVAQQISEL----------------------KRGTEIVVCTPGRMI 638
Query: 186 DHINTTKG--FTLEHLHYLVVDETDRLLREAYQSWLPTVLELAQSNDDSFSQPADSFFPC 243
D + T+ G L + YLV+DE DR+ ++ P + + Q+
Sbjct: 639 DILCTSSGKITNLRRVTYLVMDEADRMFDMGFE---PQITRIVQN--------------- 680
Query: 244 SVGALRTRRRCGVERGFKDKPYPRLAKMVLSATITQDPGKLVQLNLHLPLFLRAGQMRYR 303
+R R+ ++ SAT + L + L+ P+ ++ G R
Sbjct: 681 ----IRPDRQT----------------VLFSATFPRQVEILARKVLNKPVEIQVGG---R 717
Query: 304 LPENLESYKLICETKVKPLYLVALLKSLG-GE-----KCIVFTKSVESTHRLCKLLNCFE 357
N + +L+ +V+P L GE K +VF S + C L F+
Sbjct: 718 SVVNKDIAQLV---EVRPENERFLRLLELLGEWYEKGKILVFVHSQDK----CDAL--FK 768
Query: 358 DLQIDMKE------YSGLQHQCVRSKTLTAFRKGEFQVLVSSDAMTRGMDVEGVRNVINY 411
DL MK G + Q R T++ F+ +LV++ RG+DV+ + VIN+
Sbjct: 769 DL---MKHGYPCLSLHGAKDQTDRESTISDFKSNVCNLLVATSIAARGLDVKELELVINF 825
Query: 412 DMPKYIKTYVHRAGRTARAGQTGRCFTLMSKDEVRRFKKLMQKAEAGSCEEHILPSSL 469
D+P + + YVHR GRT RAG+ G T +S+++ R L++ E E I+P L
Sbjct: 826 DVPNHYEDYVHRVGRTGRAGRKGCAITFISEEDARYAPDLVKALE---LSEQIVPDDL 880
>Medtr2g007000.1 | DEAD-box RNA helicase family protein | HC |
chr2:778249-784007 | 20130731
Length = 1114
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 112/418 (26%), Positives = 181/418 (43%), Gaps = 96/418 (22%)
Query: 70 RDLCVNSPTGSGKTLAYALPIVQMLSTR----VAKCLRALVVVPTRDLAFQVKRVFDGVA 125
RD + TGSGKTLA+ LP+++ + + V L++ PTR+L Q+
Sbjct: 541 RDCIGVAKTGSGKTLAFVLPMLRHIKDQPPVVVGDGPIGLIMAPTRELVQQIHSDIRKFT 600
Query: 126 SPLGLRVGLAVGQSSVADEISELVHVPAREAGSCYDPQHALFVRFESKVDILVATPGRLM 185
+G+R G S VA +ISEL + +I+V TPGR++
Sbjct: 601 KVMGIRCVPVYGGSGVAQQISEL----------------------KRGTEIVVCTPGRMI 638
Query: 186 DHINTTKG--FTLEHLHYLVVDETDRLLREAYQSWLPTVLELAQSNDDSFSQPADSFFPC 243
D + T+ G L + YLV+DE DR+ ++ P + + Q+
Sbjct: 639 DILCTSSGKITNLRRVTYLVMDEADRMFDMGFE---PQITRIVQN--------------- 680
Query: 244 SVGALRTRRRCGVERGFKDKPYPRLAKMVLSATITQDPGKLVQLNLHLPLFLRAGQMRYR 303
+R R+ ++ SAT + L + L+ P+ ++ G R
Sbjct: 681 ----IRPDRQT----------------VLFSATFPRQVEILARKVLNKPVEIQVGG---R 717
Query: 304 LPENLESYKLICETKVKPLYLVALLKSLG-GE-----KCIVFTKSVESTHRLCKLLNCFE 357
N + +L+ +V+P L GE K +VF S + C L F+
Sbjct: 718 SVVNKDIAQLV---EVRPENERFLRLLELLGEWYEKGKILVFVHSQDK----CDAL--FK 768
Query: 358 DLQIDMKE------YSGLQHQCVRSKTLTAFRKGEFQVLVSSDAMTRGMDVEGVRNVINY 411
DL MK G + Q R T++ F+ +LV++ RG+DV+ + VIN+
Sbjct: 769 DL---MKHGYPCLSLHGAKDQTDRESTISDFKSNVCNLLVATSIAARGLDVKELELVINF 825
Query: 412 DMPKYIKTYVHRAGRTARAGQTGRCFTLMSKDEVRRFKKLMQKAEAGSCEEHILPSSL 469
D+P + + YVHR GRT RAG+ G T +S+++ R L++ E E I+P L
Sbjct: 826 DVPNHYEDYVHRVGRTGRAGRKGCAITFISEEDARYAPDLVKALE---LSEQIVPDDL 880
>Medtr2g007000.5 | DEAD-box RNA helicase family protein | HC |
chr2:778236-784023 | 20130731
Length = 1114
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 112/418 (26%), Positives = 181/418 (43%), Gaps = 96/418 (22%)
Query: 70 RDLCVNSPTGSGKTLAYALPIVQMLSTR----VAKCLRALVVVPTRDLAFQVKRVFDGVA 125
RD + TGSGKTLA+ LP+++ + + V L++ PTR+L Q+
Sbjct: 541 RDCIGVAKTGSGKTLAFVLPMLRHIKDQPPVVVGDGPIGLIMAPTRELVQQIHSDIRKFT 600
Query: 126 SPLGLRVGLAVGQSSVADEISELVHVPAREAGSCYDPQHALFVRFESKVDILVATPGRLM 185
+G+R G S VA +ISEL + +I+V TPGR++
Sbjct: 601 KVMGIRCVPVYGGSGVAQQISEL----------------------KRGTEIVVCTPGRMI 638
Query: 186 DHINTTKG--FTLEHLHYLVVDETDRLLREAYQSWLPTVLELAQSNDDSFSQPADSFFPC 243
D + T+ G L + YLV+DE DR+ ++ P + + Q+
Sbjct: 639 DILCTSSGKITNLRRVTYLVMDEADRMFDMGFE---PQITRIVQN--------------- 680
Query: 244 SVGALRTRRRCGVERGFKDKPYPRLAKMVLSATITQDPGKLVQLNLHLPLFLRAGQMRYR 303
+R R+ ++ SAT + L + L+ P+ ++ G R
Sbjct: 681 ----IRPDRQT----------------VLFSATFPRQVEILARKVLNKPVEIQVGG---R 717
Query: 304 LPENLESYKLICETKVKPLYLVALLKSLG-GE-----KCIVFTKSVESTHRLCKLLNCFE 357
N + +L+ +V+P L GE K +VF S + C L F+
Sbjct: 718 SVVNKDIAQLV---EVRPENERFLRLLELLGEWYEKGKILVFVHSQDK----CDAL--FK 768
Query: 358 DLQIDMKE------YSGLQHQCVRSKTLTAFRKGEFQVLVSSDAMTRGMDVEGVRNVINY 411
DL MK G + Q R T++ F+ +LV++ RG+DV+ + VIN+
Sbjct: 769 DL---MKHGYPCLSLHGAKDQTDRESTISDFKSNVCNLLVATSIAARGLDVKELELVINF 825
Query: 412 DMPKYIKTYVHRAGRTARAGQTGRCFTLMSKDEVRRFKKLMQKAEAGSCEEHILPSSL 469
D+P + + YVHR GRT RAG+ G T +S+++ R L++ E E I+P L
Sbjct: 826 DVPNHYEDYVHRVGRTGRAGRKGCAITFISEEDARYAPDLVKALE---LSEQIVPDDL 880
>Medtr2g007000.7 | DEAD-box RNA helicase family protein | HC |
chr2:778196-784023 | 20130731
Length = 1114
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 112/418 (26%), Positives = 181/418 (43%), Gaps = 96/418 (22%)
Query: 70 RDLCVNSPTGSGKTLAYALPIVQMLSTR----VAKCLRALVVVPTRDLAFQVKRVFDGVA 125
RD + TGSGKTLA+ LP+++ + + V L++ PTR+L Q+
Sbjct: 541 RDCIGVAKTGSGKTLAFVLPMLRHIKDQPPVVVGDGPIGLIMAPTRELVQQIHSDIRKFT 600
Query: 126 SPLGLRVGLAVGQSSVADEISELVHVPAREAGSCYDPQHALFVRFESKVDILVATPGRLM 185
+G+R G S VA +ISEL + +I+V TPGR++
Sbjct: 601 KVMGIRCVPVYGGSGVAQQISEL----------------------KRGTEIVVCTPGRMI 638
Query: 186 DHINTTKG--FTLEHLHYLVVDETDRLLREAYQSWLPTVLELAQSNDDSFSQPADSFFPC 243
D + T+ G L + YLV+DE DR+ ++ P + + Q+
Sbjct: 639 DILCTSSGKITNLRRVTYLVMDEADRMFDMGFE---PQITRIVQN--------------- 680
Query: 244 SVGALRTRRRCGVERGFKDKPYPRLAKMVLSATITQDPGKLVQLNLHLPLFLRAGQMRYR 303
+R R+ ++ SAT + L + L+ P+ ++ G R
Sbjct: 681 ----IRPDRQT----------------VLFSATFPRQVEILARKVLNKPVEIQVGG---R 717
Query: 304 LPENLESYKLICETKVKPLYLVALLKSLG-GE-----KCIVFTKSVESTHRLCKLLNCFE 357
N + +L+ +V+P L GE K +VF S + C L F+
Sbjct: 718 SVVNKDIAQLV---EVRPENERFLRLLELLGEWYEKGKILVFVHSQDK----CDAL--FK 768
Query: 358 DLQIDMKE------YSGLQHQCVRSKTLTAFRKGEFQVLVSSDAMTRGMDVEGVRNVINY 411
DL MK G + Q R T++ F+ +LV++ RG+DV+ + VIN+
Sbjct: 769 DL---MKHGYPCLSLHGAKDQTDRESTISDFKSNVCNLLVATSIAARGLDVKELELVINF 825
Query: 412 DMPKYIKTYVHRAGRTARAGQTGRCFTLMSKDEVRRFKKLMQKAEAGSCEEHILPSSL 469
D+P + + YVHR GRT RAG+ G T +S+++ R L++ E E I+P L
Sbjct: 826 DVPNHYEDYVHRVGRTGRAGRKGCAITFISEEDARYAPDLVKALE---LSEQIVPDDL 880
>Medtr2g007000.3 | DEAD-box RNA helicase family protein | HC |
chr2:778196-784023 | 20130731
Length = 1114
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 112/418 (26%), Positives = 181/418 (43%), Gaps = 96/418 (22%)
Query: 70 RDLCVNSPTGSGKTLAYALPIVQMLSTR----VAKCLRALVVVPTRDLAFQVKRVFDGVA 125
RD + TGSGKTLA+ LP+++ + + V L++ PTR+L Q+
Sbjct: 541 RDCIGVAKTGSGKTLAFVLPMLRHIKDQPPVVVGDGPIGLIMAPTRELVQQIHSDIRKFT 600
Query: 126 SPLGLRVGLAVGQSSVADEISELVHVPAREAGSCYDPQHALFVRFESKVDILVATPGRLM 185
+G+R G S VA +ISEL + +I+V TPGR++
Sbjct: 601 KVMGIRCVPVYGGSGVAQQISEL----------------------KRGTEIVVCTPGRMI 638
Query: 186 DHINTTKG--FTLEHLHYLVVDETDRLLREAYQSWLPTVLELAQSNDDSFSQPADSFFPC 243
D + T+ G L + YLV+DE DR+ ++ P + + Q+
Sbjct: 639 DILCTSSGKITNLRRVTYLVMDEADRMFDMGFE---PQITRIVQN--------------- 680
Query: 244 SVGALRTRRRCGVERGFKDKPYPRLAKMVLSATITQDPGKLVQLNLHLPLFLRAGQMRYR 303
+R R+ ++ SAT + L + L+ P+ ++ G R
Sbjct: 681 ----IRPDRQT----------------VLFSATFPRQVEILARKVLNKPVEIQVGG---R 717
Query: 304 LPENLESYKLICETKVKPLYLVALLKSLG-GE-----KCIVFTKSVESTHRLCKLLNCFE 357
N + +L+ +V+P L GE K +VF S + C L F+
Sbjct: 718 SVVNKDIAQLV---EVRPENERFLRLLELLGEWYEKGKILVFVHSQDK----CDAL--FK 768
Query: 358 DLQIDMKE------YSGLQHQCVRSKTLTAFRKGEFQVLVSSDAMTRGMDVEGVRNVINY 411
DL MK G + Q R T++ F+ +LV++ RG+DV+ + VIN+
Sbjct: 769 DL---MKHGYPCLSLHGAKDQTDRESTISDFKSNVCNLLVATSIAARGLDVKELELVINF 825
Query: 412 DMPKYIKTYVHRAGRTARAGQTGRCFTLMSKDEVRRFKKLMQKAEAGSCEEHILPSSL 469
D+P + + YVHR GRT RAG+ G T +S+++ R L++ E E I+P L
Sbjct: 826 DVPNHYEDYVHRVGRTGRAGRKGCAITFISEEDARYAPDLVKALE---LSEQIVPDDL 880
>Medtr2g007000.9 | DEAD-box RNA helicase family protein | HC |
chr2:778196-784007 | 20130731
Length = 1114
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 112/418 (26%), Positives = 181/418 (43%), Gaps = 96/418 (22%)
Query: 70 RDLCVNSPTGSGKTLAYALPIVQMLSTR----VAKCLRALVVVPTRDLAFQVKRVFDGVA 125
RD + TGSGKTLA+ LP+++ + + V L++ PTR+L Q+
Sbjct: 541 RDCIGVAKTGSGKTLAFVLPMLRHIKDQPPVVVGDGPIGLIMAPTRELVQQIHSDIRKFT 600
Query: 126 SPLGLRVGLAVGQSSVADEISELVHVPAREAGSCYDPQHALFVRFESKVDILVATPGRLM 185
+G+R G S VA +ISEL + +I+V TPGR++
Sbjct: 601 KVMGIRCVPVYGGSGVAQQISEL----------------------KRGTEIVVCTPGRMI 638
Query: 186 DHINTTKG--FTLEHLHYLVVDETDRLLREAYQSWLPTVLELAQSNDDSFSQPADSFFPC 243
D + T+ G L + YLV+DE DR+ ++ P + + Q+
Sbjct: 639 DILCTSSGKITNLRRVTYLVMDEADRMFDMGFE---PQITRIVQN--------------- 680
Query: 244 SVGALRTRRRCGVERGFKDKPYPRLAKMVLSATITQDPGKLVQLNLHLPLFLRAGQMRYR 303
+R R+ ++ SAT + L + L+ P+ ++ G R
Sbjct: 681 ----IRPDRQT----------------VLFSATFPRQVEILARKVLNKPVEIQVGG---R 717
Query: 304 LPENLESYKLICETKVKPLYLVALLKSLG-GE-----KCIVFTKSVESTHRLCKLLNCFE 357
N + +L+ +V+P L GE K +VF S + C L F+
Sbjct: 718 SVVNKDIAQLV---EVRPENERFLRLLELLGEWYEKGKILVFVHSQDK----CDAL--FK 768
Query: 358 DLQIDMKE------YSGLQHQCVRSKTLTAFRKGEFQVLVSSDAMTRGMDVEGVRNVINY 411
DL MK G + Q R T++ F+ +LV++ RG+DV+ + VIN+
Sbjct: 769 DL---MKHGYPCLSLHGAKDQTDRESTISDFKSNVCNLLVATSIAARGLDVKELELVINF 825
Query: 412 DMPKYIKTYVHRAGRTARAGQTGRCFTLMSKDEVRRFKKLMQKAEAGSCEEHILPSSL 469
D+P + + YVHR GRT RAG+ G T +S+++ R L++ E E I+P L
Sbjct: 826 DVPNHYEDYVHRVGRTGRAGRKGCAITFISEEDARYAPDLVKALE---LSEQIVPDDL 880
>Medtr2g007000.10 | DEAD-box RNA helicase family protein | HC |
chr2:778234-784007 | 20130731
Length = 1114
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 112/418 (26%), Positives = 181/418 (43%), Gaps = 96/418 (22%)
Query: 70 RDLCVNSPTGSGKTLAYALPIVQMLSTR----VAKCLRALVVVPTRDLAFQVKRVFDGVA 125
RD + TGSGKTLA+ LP+++ + + V L++ PTR+L Q+
Sbjct: 541 RDCIGVAKTGSGKTLAFVLPMLRHIKDQPPVVVGDGPIGLIMAPTRELVQQIHSDIRKFT 600
Query: 126 SPLGLRVGLAVGQSSVADEISELVHVPAREAGSCYDPQHALFVRFESKVDILVATPGRLM 185
+G+R G S VA +ISEL + +I+V TPGR++
Sbjct: 601 KVMGIRCVPVYGGSGVAQQISEL----------------------KRGTEIVVCTPGRMI 638
Query: 186 DHINTTKG--FTLEHLHYLVVDETDRLLREAYQSWLPTVLELAQSNDDSFSQPADSFFPC 243
D + T+ G L + YLV+DE DR+ ++ P + + Q+
Sbjct: 639 DILCTSSGKITNLRRVTYLVMDEADRMFDMGFE---PQITRIVQN--------------- 680
Query: 244 SVGALRTRRRCGVERGFKDKPYPRLAKMVLSATITQDPGKLVQLNLHLPLFLRAGQMRYR 303
+R R+ ++ SAT + L + L+ P+ ++ G R
Sbjct: 681 ----IRPDRQT----------------VLFSATFPRQVEILARKVLNKPVEIQVGG---R 717
Query: 304 LPENLESYKLICETKVKPLYLVALLKSLG-GE-----KCIVFTKSVESTHRLCKLLNCFE 357
N + +L+ +V+P L GE K +VF S + C L F+
Sbjct: 718 SVVNKDIAQLV---EVRPENERFLRLLELLGEWYEKGKILVFVHSQDK----CDAL--FK 768
Query: 358 DLQIDMKE------YSGLQHQCVRSKTLTAFRKGEFQVLVSSDAMTRGMDVEGVRNVINY 411
DL MK G + Q R T++ F+ +LV++ RG+DV+ + VIN+
Sbjct: 769 DL---MKHGYPCLSLHGAKDQTDRESTISDFKSNVCNLLVATSIAARGLDVKELELVINF 825
Query: 412 DMPKYIKTYVHRAGRTARAGQTGRCFTLMSKDEVRRFKKLMQKAEAGSCEEHILPSSL 469
D+P + + YVHR GRT RAG+ G T +S+++ R L++ E E I+P L
Sbjct: 826 DVPNHYEDYVHRVGRTGRAGRKGCAITFISEEDARYAPDLVKALE---LSEQIVPDDL 880
>Medtr2g099620.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr2:42715955-42719519 | 20130731
Length = 413
Score = 104 bits (259), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 102/424 (24%), Positives = 182/424 (42%), Gaps = 82/424 (19%)
Query: 57 AVWQETVGPGNFDRDLCVNSPTGSGKTLAYALPIVQMLSTRVAKCLRALVVVPTRDLAFQ 116
A+ Q + P D+ + +G+GKT + I+Q L + +C +ALV+ PTR+LA Q
Sbjct: 65 AIQQRGIVPFIKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQC-QALVLAPTRELAQQ 123
Query: 117 VKRVFDGVASPLGLRVGLAVGQSSVADEISELVHVPAREAGSCYDPQHALFVRFESKVDI 176
+++V + LG++V VG +SV ++ Q L ++ V +
Sbjct: 124 IEKVMRALGDYLGVKVHACVGGTSVRED------------------QRIL----QTGVHV 161
Query: 177 LVATPGRLMDHINTTKGFTLEHLHYLVVDETDRLLREAYQSWLPTVLELAQSNDDSFSQP 236
+V TPGR+ D + + + + V+DE D +L
Sbjct: 162 VVGTPGRVFDMLRR-QSLRSDCIKMFVLDEADEML------------------------- 195
Query: 237 ADSFFPCSVGALRTRRRCGVERGFKDKPY-------PRLAKMVLSATITQDPGKLVQLNL 289
RGFKD+ Y P++ V SAT+ + ++ + +
Sbjct: 196 --------------------SRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFM 235
Query: 290 HLPLFLRAGQMRYRLPENLESYKLICETKVKPLYLVALLKSLGGEKCIVFTKSVESTHRL 349
+ P+ + + L + Y + + + K L L ++L + ++F V + ++
Sbjct: 236 NKPVRILVKRDELTLEGIKQFYVNVDKEEWKLETLCDLYETLAITQSVIF---VNTRRKV 292
Query: 350 CKLLNCFEDLQIDMKEYSGLQHQCVRSKTLTAFRKGEFQVLVSSDAMTRGMDVEGVRNVI 409
L + + G Q R + FR G +VL+++D + RG+DV+ V VI
Sbjct: 293 DWLTDKMRGRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVI 352
Query: 410 NYDMPKYIKTYVHRAGRTARAGQTGRCFTLMSKDEVRRFKKLMQKAEAGSCEEHILPSSL 469
NYD+P + Y+HR GR+ R G+ G ++ ++ R + QK EE LPS++
Sbjct: 353 NYDLPTQPENYLHRIGRSGRFGRKGVAINFVTLEDARMLADI-QKFYNVIVEE--LPSNV 409
Query: 470 IDAL 473
D L
Sbjct: 410 ADLL 413
>Medtr2g099620.2 | DEAD-box ATP-dependent RNA helicase | HC |
chr2:42715955-42719519 | 20130731
Length = 397
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 102/424 (24%), Positives = 182/424 (42%), Gaps = 82/424 (19%)
Query: 57 AVWQETVGPGNFDRDLCVNSPTGSGKTLAYALPIVQMLSTRVAKCLRALVVVPTRDLAFQ 116
A+ Q + P D+ + +G+GKT + I+Q L + +C +ALV+ PTR+LA Q
Sbjct: 49 AIQQRGIVPFIKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQC-QALVLAPTRELAQQ 107
Query: 117 VKRVFDGVASPLGLRVGLAVGQSSVADEISELVHVPAREAGSCYDPQHALFVRFESKVDI 176
+++V + LG++V VG +SV ++ Q L ++ V +
Sbjct: 108 IEKVMRALGDYLGVKVHACVGGTSVRED------------------QRIL----QTGVHV 145
Query: 177 LVATPGRLMDHINTTKGFTLEHLHYLVVDETDRLLREAYQSWLPTVLELAQSNDDSFSQP 236
+V TPGR+ D + + + + V+DE D +L
Sbjct: 146 VVGTPGRVFDMLRR-QSLRSDCIKMFVLDEADEML------------------------- 179
Query: 237 ADSFFPCSVGALRTRRRCGVERGFKDKPY-------PRLAKMVLSATITQDPGKLVQLNL 289
RGFKD+ Y P++ V SAT+ + ++ + +
Sbjct: 180 --------------------SRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFM 219
Query: 290 HLPLFLRAGQMRYRLPENLESYKLICETKVKPLYLVALLKSLGGEKCIVFTKSVESTHRL 349
+ P+ + + L + Y + + + K L L ++L + ++F V + ++
Sbjct: 220 NKPVRILVKRDELTLEGIKQFYVNVDKEEWKLETLCDLYETLAITQSVIF---VNTRRKV 276
Query: 350 CKLLNCFEDLQIDMKEYSGLQHQCVRSKTLTAFRKGEFQVLVSSDAMTRGMDVEGVRNVI 409
L + + G Q R + FR G +VL+++D + RG+DV+ V VI
Sbjct: 277 DWLTDKMRGRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVI 336
Query: 410 NYDMPKYIKTYVHRAGRTARAGQTGRCFTLMSKDEVRRFKKLMQKAEAGSCEEHILPSSL 469
NYD+P + Y+HR GR+ R G+ G ++ ++ R + QK EE LPS++
Sbjct: 337 NYDLPTQPENYLHRIGRSGRFGRKGVAINFVTLEDARMLADI-QKFYNVIVEE--LPSNV 393
Query: 470 IDAL 473
D L
Sbjct: 394 ADLL 397
>Medtr2g063080.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr2:26668487-26670676 | 20130731
Length = 552
Score = 103 bits (256), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 115/414 (27%), Positives = 182/414 (43%), Gaps = 58/414 (14%)
Query: 69 DRDLCVNSPTGSGKTLAYALPIVQMLS-------------TRVAKCL--RALVVVPTRDL 113
+RD+ + S TGSGKTLAY LPI+ ++ K L A++V P+R+L
Sbjct: 145 NRDVIIQSYTGSGKTLAYLLPILSVIGPLKGENNEGGGDGGESGKKLGVEAVIVAPSREL 204
Query: 114 AFQVKRVFDGVASPLGLRVGLAVGQSSVADEISELVHVPAREAGSCYDPQHALFVRFESK 173
Q+ R F+ + LG+ V Q LV G+ Q + +K
Sbjct: 205 GMQIVREFEKI---LGMENRKVVQQ---------LV------GGANRTRQEEALKK--NK 244
Query: 174 VDILVATPGRLMDHINTTKGFTLEHLHYLVVDETDRLL----REAYQSWLPTVLELAQSN 229
I+V TPGR+ + ++ + YLV+DE D LL RE L V + ++
Sbjct: 245 PAIVVGTPGRIAE-LSASGKLRAHGCQYLVLDEVDELLSFNFREDMHRLLEHVGRRSGAD 303
Query: 230 DDSFSQPAD-------SFFPCSVGALRTRRRCGVERGFKDKPYPRLAKMVLSATITQDPG 282
+S ++ + + P SV +R + G D + K+V T++ +P
Sbjct: 304 HNSKAKKTERQLIMVSATVPFSV--VRAAKSWG-----SDPLLVQAKKIVPLETLSPEPV 356
Query: 283 KLVQLNLHLPLFLRAGQMRYRLPENLESYKLICETKVKPLYLVALLKSLGGEKCIVFTKS 342
KL + P + LP L+ Y + + K L + +L + IVF
Sbjct: 357 KLSPSSSSTPSVPSKAVVE-SLPPALKHYYCVVRLQHKVDTLRRCIHALDAKFVIVF--- 412
Query: 343 VESTHRLCKLLNCFEDLQIDMKEYSGLQHQCVRSKTLTAFRKGEFQVLVSSDAMTRGMDV 402
+ T +L ++ E + E G + RS TL F+ GE +VLV+++ RG+DV
Sbjct: 413 MNHTKQLKDVVFKLEARGVKAAELHGDLGKLGRSTTLKKFKNGEVRVLVTNELSARGLDV 472
Query: 403 EGVRNVINYDMPKYIKTYVHRAGRTARAGQTGRCFTLMSKDEVRRFKKLMQKAE 456
V+N D+P Y HRAGRT R G+ G T+ + EV +KL ++ E
Sbjct: 473 AECDLVVNLDLPTDSIHYAHRAGRTGRLGRNGTVLTICEESEVFVVRKLKKQLE 526
>Medtr1g095810.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr1:43124508-43126947 | 20130731
Length = 589
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 107/410 (26%), Positives = 180/410 (43%), Gaps = 95/410 (23%)
Query: 70 RDLCVNSPTGSGKTLAYALPIVQM-------LSTRVAKCLRALVVVPTRDLAFQVKRVFD 122
RD+ + TGSGKTL + LP++ M + + L++ P+R+LA Q V +
Sbjct: 182 RDMIGIAFTGSGKTLVFVLPMIMMAMQEEIMMPIVPGEGPFGLIICPSRELARQTYEVIE 241
Query: 123 GVASPLG------LRVGLAVGQSSVADEISELVHVPAREAGSCYDPQHALFVRFESKVDI 176
PL LR L +G + ++ E+V + V I
Sbjct: 242 EFLLPLKEAGYPELRPLLCIGGIDMRSQL-EIV---------------------KKGVHI 279
Query: 177 LVATPGRLMDHINTTKGFTLEHLHYLVVDETDRLLREAYQSWLPTVLELAQSNDDSFSQP 236
+VATPGRL D + K L++ YL +DE DRL+ ++ D +
Sbjct: 280 VVATPGRLKDML-AKKKMNLDNCRYLTLDEADRLVDLGFE--------------DDIREV 324
Query: 237 ADSFFPCSVGALRTRRRCGVERGFKDKPYPRLAKMVLSATITQDPGKLVQLNLHLPLFL- 295
D F + +R+ ++ SAT+ + L P+ +
Sbjct: 325 FDHF--------KAQRQT----------------LLFSATMPTKIQNFARSALVKPIIVN 360
Query: 296 --RAGQMRYRLPENLESYKLICETKVKPLYLVALLKSLGGEKCIVFTKS---VESTHRLC 350
RAG + + +E K + K +YL+ L+ ++F ++ V+ H
Sbjct: 361 VGRAGAANLDVIQEVEYVK----QEAKIVYLLECLQKTP-PPVLIFCENKADVDDIHEYL 415
Query: 351 KLLNCFEDLQIDMKEYSGLQHQCVRSKTLTAFRKGEFQVLVSSDAMTRGMDVEGVRNVIN 410
LL E + I G + Q R +++F+ G+ VLV++D ++G+D +++VIN
Sbjct: 416 -LLKGVEAVAI-----HGGKDQEEREYAISSFKAGKKDVLVATDVASKGLDFPDIQHVIN 469
Query: 411 YDMPKYIKTYVHRAGRTARAGQTGRCFTLMSKDE----VRRFKKLMQKAE 456
YDMP I+ YVHR GRT R G+TG T ++K++ + K L+Q+A+
Sbjct: 470 YDMPAEIENYVHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAK 519
>Medtr8g018400.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr8:6253262-6248871 | 20130731
Length = 413
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 102/424 (24%), Positives = 181/424 (42%), Gaps = 82/424 (19%)
Query: 57 AVWQETVGPGNFDRDLCVNSPTGSGKTLAYALPIVQMLSTRVAKCLRALVVVPTRDLAFQ 116
A+ Q + P D+ + +G+GKT + I+Q L + +C +ALV+ PTR+LA Q
Sbjct: 65 AIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQC-QALVLAPTRELAQQ 123
Query: 117 VKRVFDGVASPLGLRVGLAVGQSSVADEISELVHVPAREAGSCYDPQHALFVRFESKVDI 176
+++V + LG++V VG +SV ++ Q L ++ V
Sbjct: 124 IEKVMRALGDFLGVKVHACVGGTSVRED------------------QRIL----QAGVHT 161
Query: 177 LVATPGRLMDHINTTKGFTLEHLHYLVVDETDRLLREAYQSWLPTVLELAQSNDDSFSQP 236
+V TPGR+ D + + E + V+DE D +L
Sbjct: 162 VVGTPGRVFDMLRR-QSLRSECIKMFVLDEADEML------------------------- 195
Query: 237 ADSFFPCSVGALRTRRRCGVERGFKDKPYPRLAKM-------VLSATITQDPGKLVQLNL 289
RGFKD+ Y ++ V SAT+ + ++ + +
Sbjct: 196 --------------------SRGFKDQIYDIFQQLPGKIQVGVFSATMPPEALEITRKFM 235
Query: 290 HLPLFLRAGQMRYRLPENLESYKLICETKVKPLYLVALLKSLGGEKCIVFTKSVESTHRL 349
+ P+ + + L + Y + + + K L L ++L + ++F V + ++
Sbjct: 236 NKPVRILVKRDELTLEGIKQFYVNVDKEEWKLETLCDLYETLAITQSVIF---VNTRRKV 292
Query: 350 CKLLNCFEDLQIDMKEYSGLQHQCVRSKTLTAFRKGEFQVLVSSDAMTRGMDVEGVRNVI 409
L + + G Q R + FR G +VL+++D + RG+DV+ V VI
Sbjct: 293 DWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVI 352
Query: 410 NYDMPKYIKTYVHRAGRTARAGQTGRCFTLMSKDEVRRFKKLMQKAEAGSCEEHILPSSL 469
NYD+P + Y+HR GR+ R G+ G ++ ++ R + QK + EE LPS++
Sbjct: 353 NYDLPTQPENYLHRIGRSGRFGRKGVSINFVTGEDARMLADI-QKFYNVTIEE--LPSNV 409
Query: 470 IDAL 473
D L
Sbjct: 410 ADLL 413
>Medtr2g438110.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr2:15371233-15366440 | 20130731
Length = 406
Score = 102 bits (255), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 95/406 (23%), Positives = 167/406 (41%), Gaps = 83/406 (20%)
Query: 57 AVWQETVGPGNFDRDLCVNSPTGSGKTLAYALPIVQMLSTRVAKCLRALVVVPTRDLAFQ 116
A+ Q V P RD+ + +G+GKT AL + Q++ T V + ++AL+V PTR+LA Q
Sbjct: 58 AIQQRAVAPIIQGRDVIAQAQSGTGKTSMIALTVCQVVDTSVRE-VQALIVSPTRELASQ 116
Query: 117 VKRVFDGVASPLGLRVGLAVGQSSVADEISELVHVPAREAGSCYDPQHALFVRFESKVDI 176
++V + + ++ +G SV ++I +L H V +
Sbjct: 117 TEKVILTIGDFINIQAHACIGGKSVGEDIRKLEH----------------------GVHV 154
Query: 177 LVATPGRLMDHINTTKGFTLEHLHYLVVDETDRLLREAYQSWLPTVLELAQSNDDSFSQP 236
+ TPGR+ D I + + LV+DE+D +L
Sbjct: 155 VSGTPGRVCDMIKR-RTLRTRAIKLLVLDESDEML------------------------- 188
Query: 237 ADSFFPCSVGALRTRRRCGVERGFKDKPY-------PRLAKMVLSATITQDPGKLVQLNL 289
RGFKD+ Y P L ++SAT+ + ++ +
Sbjct: 189 --------------------SRGFKDQIYDVYRYLPPDLQVCLISATLPHEILEMTNKFM 228
Query: 290 HLPLFLRAGQMRYRLPENLESYKLICETKVKPLYLVALLKSLGGEKCIVFTKSVESTHRL 349
P+ + + L + + + + K L L +L + ++F + L
Sbjct: 229 TDPVRILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWL 288
Query: 350 CKLL--NCFEDLQIDMKEYSGLQHQCVRSKTLTAFRKGEFQVLVSSDAMTRGMDVEGVRN 407
+ + N F + G Q R + FR G +VL+++D RG+DV+ V
Sbjct: 289 TEKMRNNNFT-----VSAMHGDMPQRERDAIMGEFRAGTTRVLITTDVWARGLDVQQVSL 343
Query: 408 VINYDMPKYIKTYVHRAGRTARAGQTGRCFTLMSKDEVRRFKKLMQ 453
VINYD+P + Y+HR GR+ R G+ G + D+++ + + Q
Sbjct: 344 VINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKSDDIKILRDIEQ 389
>Medtr1g083130.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr1:37010922-37003111 | 20130731
Length = 604
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 115/432 (26%), Positives = 181/432 (41%), Gaps = 116/432 (26%)
Query: 70 RDLCVNSPTGSGKTLAYALPIVQMLST----RVAKCLRALVVVPTRDLAFQVKRVFDGVA 125
+D+ + TGSGKTLAY LP++Q L T R V+ P+R+L Q+ + V
Sbjct: 63 KDVVARAKTGSGKTLAYLLPLLQKLFTANVDRKKLAPNVFVLAPSRELCQQI---YVEVK 119
Query: 126 SPLGLRVGLAVGQSSVADEISELVHVP--AREAGS---CYDPQHALFVRFESKVDILVAT 180
S L EL VP A + S D Q AL D+L++T
Sbjct: 120 SLL------------------ELCKVPLKAVQLNSNMLATDLQAALV----GPPDVLIST 157
Query: 181 PGRLMDHINTT--KGFTLE-HLHYLVVDETDRLLREAYQSWLPTVLELAQSNDDSFSQPA 237
P + ++ + + ++ L LV+DE D LL Y+ ND P
Sbjct: 158 PACIAKCLSNSVLQAASINGSLETLVLDEADLLLSYGYE------------NDIKALTP- 204
Query: 238 DSFFPCSVGALRTRRRCGVERGFKDKPYPRLAKMVLSATITQDPGKLVQLNLHLPLFLRA 297
P R C +++SAT + D KL +L LH P+ L
Sbjct: 205 --HIP---------RSCQC--------------LLMSATSSDDVDKLKKLMLHNPVILTL 239
Query: 298 GQMRYR----LPENLESYKLICETKVKPLYLVALLK-SLGGEKCIVFTKSVESTHRLCKL 352
++ R +P+N++ + + C K LY++A+LK L +K ++FT +++++ RL
Sbjct: 240 PEVGNRKDEVIPKNVQQFWIYCPANDKLLYILAMLKLELVQKKVLIFTNNIDTSFRLKLF 299
Query: 353 LNCFEDLQIDMKEYSGLQHQCVRSKTLTAFRKGEFQVLVSSD------------------ 394
L E I + Q R L F G F L+++D
Sbjct: 300 L---EKFGIKSAVLNAELPQNSRLHILEEFNAGLFDYLIATDISQSTEKDEAPKENIVGS 356
Query: 395 ---------------AMTRGMDVEGVRNVINYDMPKYIKTYVHRAGRTARAGQTGRCFTL 439
+ RG+D + V VIN++MP+ + YVHR GRT RA +G +L
Sbjct: 357 KKSRKYTKLKLDSEFGVVRGIDFKNVYTVINFEMPRSVTGYVHRIGRTGRAYSSGTSISL 416
Query: 440 MSKDEVRRFKKL 451
+S DE+ F+++
Sbjct: 417 VSTDEMDTFEEV 428
>Medtr1g026830.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr1:8797246-8799070 | 20130731
Length = 591
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 105/407 (25%), Positives = 177/407 (43%), Gaps = 89/407 (21%)
Query: 70 RDLCVNSPTGSGKTLAYALPIVQMLSTRVAKCLRALVVVPTRDLAFQVKRVFDGVASPLG 129
RD+ + TGSGKTL + LP++ M + + +VP P G
Sbjct: 184 RDMIGIAFTGSGKTLVFVLPMIMMAMQEEIR----MPIVPGE--------------GPFG 225
Query: 130 LRVGLAVGQSSVADEISELVHVPAREAG----------SCYDPQHALFVRFESKVDILVA 179
L + + + E+ E +P +EAG D + L + + V I+VA
Sbjct: 226 LIICPSWELARQTYEVIEQFLLPLKEAGYPELRPLLCIGGIDMRSQLKI-VKKGVHIVVA 284
Query: 180 TPGRLMDHINTTKGFTLEHLHYLVVDETDRLLREAYQSWLPTVLELAQSNDDSFSQPADS 239
TPGRL D + K L++ YL +DE DRL+ ++ D + D
Sbjct: 285 TPGRLKDML-AKKKMNLDNCRYLTLDEADRLVDPGFE--------------DDIREVFDH 329
Query: 240 FFPCSVGALRTRRRCGVERGFKDKPYPRLAKMVLSATITQDPGKLVQLNLHLPLFL---R 296
F + +R+ ++ SAT+ + L P+ + R
Sbjct: 330 F--------KAQRQT----------------LLFSATMPTKIQNFARSALVKPIIVNVGR 365
Query: 297 AGQMRYRLPENLESYKLICETKVKPLYLVALLKSLGGEKCIVFTKS---VESTHRLCKLL 353
AG + + +E K + K +YL+ L+ ++F ++ V++ H LL
Sbjct: 366 AGAANLDVIQEVEYVK----QEAKIVYLLECLQKTP-PPVLIFCENKADVDNIHEYL-LL 419
Query: 354 NCFEDLQIDMKEYSGLQHQCVRSKTLTAFRKGEFQVLVSSDAMTRGMDVEGVRNVINYDM 413
E + I G + Q R +++F+ G+ VLV++D ++G+D +++VINYDM
Sbjct: 420 KGVEAVAI-----HGDKDQEDREYAISSFKTGKKDVLVATDIASKGLDFPDIQHVINYDM 474
Query: 414 PKYIKTYVHRAGRTARAGQTGRCFTLMSKDEVRR----FKKLMQKAE 456
P I+ YVHR GRT R G+TG T ++K++ K L+Q+A+
Sbjct: 475 PAEIENYVHRIGRTGRCGKTGIATTFINKNQTETTLLDLKHLLQEAK 521
>Medtr4g068990.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr4:25903244-25908935 | 20130731
Length = 752
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 105/429 (24%), Positives = 179/429 (41%), Gaps = 80/429 (18%)
Query: 70 RDLCVNSPTGSGKTLAYALPIVQMLSTR---VAKCLRALVVVPTRDLAFQVKRVFDGVAS 126
RD+ + TGSGKTLA+ +P+++ L + + ++++ PT +LA Q+ V +
Sbjct: 113 RDVLGAAKTGSGKTLAFIIPVLEKLYRKRWGPEDGVGSIIISPTWELAGQIFAVLKAIGC 172
Query: 127 PLGLRVGLAVG-QSSVADEISELVHVPAREAGSCYDPQHALFVRFESKVDILVATPGRLM 185
G GL +G + VA E C + K+++L+ TPGRL+
Sbjct: 173 IHGFSAGLLIGGRQGVATE------------KECVN-----------KLNVLICTPGRLL 209
Query: 186 DHINTTKGFTLEHLHYLVVDETDRLLREAYQSWLPTVLELAQSNDDSFSQPADSFFPCSV 245
H++ T F + LV+DE DR+L ++ L + +
Sbjct: 210 QHMDETPNFDCSKMQVLVLDEADRILDSGFKKELNAI----------------------I 247
Query: 246 GALRTRRRCGVERGFKDKPYPRLAKMVLSATITQDPGKLVQLNLHLPLFLRAGQMRYR-L 304
L RR+ M+ SAT T+ L +L+L P ++ +
Sbjct: 248 SQLPKRRQT----------------MLFSATQTKSVQDLARLSLKDPEYISVHEESVTAT 291
Query: 305 PENLESYKLICETKVKPLYLVALLKSLGGEKCIVFTKSVESTHRLCKLLNCFEDLQ--ID 362
P L+ +I K L +K+ K +VF + S ++ + F+ L I
Sbjct: 292 PTLLKQKVMIVPLDQKLDMLWNFIKTHLKSKTLVF---LSSCKQVKFVFEAFKKLHPGIP 348
Query: 363 MKEYSGLQHQCVRSKTLTAFRKGEFQVLVSSDAMTRGMDVE-GVRNVINYDMPKYIKTYV 421
+K G Q R + F + + +L ++D RG+D V V+ D P+ + +Y+
Sbjct: 349 LKCLHGRMKQEKRMAIYSEFCE-KCSILFATDVAARGLDFNRAVDWVVQVDCPENVASYI 407
Query: 422 HRAGRTARAGQTGRCFTLMSKDEVRRFKKLMQKAEAGSCEEHILP---SSLIDALHTTYQ 478
HR GRTAR G+ + E K+++K EAG H P L+ + +
Sbjct: 408 HRVGRTARYKSLGKSVLYLLPSET----KMLEKLEAGKVPVHYPPKPRKELLQPVSSLLA 463
Query: 479 SALEKFKEI 487
S L K+ E+
Sbjct: 464 SLLVKYPEL 472
>Medtr5g092560.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr5:40427970-40421694 | 20130731
Length = 747
Score = 100 bits (248), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 97/389 (24%), Positives = 160/389 (41%), Gaps = 70/389 (17%)
Query: 70 RDLCVNSPTGSGKTLAYALPIVQMLSTR---VAKCLRALVVVPTRDLAFQVKRVFDGVAS 126
RD+ + TGSGKTLA+ +P+++ L + ++++ PTR+LA Q+ V + +
Sbjct: 113 RDVLGAAKTGSGKTLAFIIPVLEKLHRERWGTEDGVGSIIISPTRELAGQIFGVLNAIGE 172
Query: 127 PLGLRVGLAVGQSSVADEISELVHVPAREAGSCYDPQHALFVRFESKVDILVATPGRLMD 186
GL +G E V+ K++IL+ TPGRL+
Sbjct: 173 HHRFSAGLLIGGGGDVAIEKECVN----------------------KLNILICTPGRLLQ 210
Query: 187 HINTTKGFTLEHLHYLVVDETDRLLREAYQSWLPTVLELAQSNDDSFSQPADSFFPCSVG 246
H++ T F + LV+DE DR+L D F + ++ +
Sbjct: 211 HMDETPNFDCSQMQVLVLDEADRIL------------------DSGFKKEVNAI----IS 248
Query: 247 ALRTRRRCGVERGFKDKPYPRLAKMVLSATITQDPGKLVQLNLHLPLFLRAGQMRYR-LP 305
L RR+ M+ SAT T+ L +L+L P ++ + P
Sbjct: 249 QLPKRRQT----------------MLFSATQTKSVQDLARLSLKDPEYISVHEESVTATP 292
Query: 306 ENLESYKLICETKVKPLYLVALLKSLGGEKCIVFTKSVESTHRLCKLLNCFEDLQ--IDM 363
L+ +I K L +K K +VF + S ++ + F+ L I +
Sbjct: 293 TLLKQTVMIVPLDQKLDMLWTFIKRHLQSKTLVF---LSSCKQVKFVFEVFKKLHPGIPL 349
Query: 364 KEYSGLQHQCVRSKTLTAFRKGEFQVLVSSDAMTRGMDV-EGVRNVINYDMPKYIKTYVH 422
K G Q R + F + + VL S+D RG+D + V V+ D P+ + +Y+H
Sbjct: 350 KCLHGRMKQEKRMAIYSEFCEEKRSVLFSTDVAARGLDFNKAVDWVVQVDCPENVASYIH 409
Query: 423 RAGRTARAGQTGRCFTLMSKDEVRRFKKL 451
R GRTAR G+ + E +KL
Sbjct: 410 RVGRTARYNSVGKSVLFLLPSETMMHEKL 438
>Medtr4g125970.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr4:52325320-52330070 | 20130731
Length = 413
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 99/424 (23%), Positives = 182/424 (42%), Gaps = 82/424 (19%)
Query: 57 AVWQETVGPGNFDRDLCVNSPTGSGKTLAYALPIVQMLSTRVAKCLRALVVVPTRDLAFQ 116
A+ Q + P D+ + +G+GKT + ++Q L V +C +ALV+ PTR+LA Q
Sbjct: 65 AIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQQLDYNVTQC-QALVLAPTRELAQQ 123
Query: 117 VKRVFDGVASPLGLRVGLAVGQSSVADEISELVHVPAREAGSCYDPQHALFVRFESKVDI 176
+++V + LG++V VG +SV ++ Q L + V +
Sbjct: 124 IEKVMRALGDYLGVKVHACVGGTSVRED------------------QRIL----STGVHV 161
Query: 177 LVATPGRLMDHINTTKGFTLEHLHYLVVDETDRLLREAYQSWLPTVLELAQSNDDSFSQP 236
+V TPGR+ D + + +++ V+DE D +L
Sbjct: 162 VVGTPGRVFDMLRR-QSLHPDYIKMFVLDEADEML------------------------- 195
Query: 237 ADSFFPCSVGALRTRRRCGVERGFKDKPYP-------RLAKMVLSATITQDPGKLVQLNL 289
RGFKD+ Y ++ V SAT+ + ++ + +
Sbjct: 196 --------------------SRGFKDQIYDIFQLLPGKIQVGVFSATMPPEALEITRKFM 235
Query: 290 HLPLFLRAGQMRYRLPENLESYKLICETKVKPLYLVALLKSLGGEKCIVFTKSVESTHRL 349
+ P+ + + L + Y + + + K L L ++L + ++F V + ++
Sbjct: 236 NKPVRILVKRDELTLEGIKQFYVNVEKEEWKLDTLCDLYETLAITQSVIF---VNTRRKV 292
Query: 350 CKLLNCFEDLQIDMKEYSGLQHQCVRSKTLTAFRKGEFQVLVSSDAMTRGMDVEGVRNVI 409
L + + G Q R + FR G +VL+++D + RG+DV+ V VI
Sbjct: 293 DWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVI 352
Query: 410 NYDMPKYIKTYVHRAGRTARAGQTGRCFTLMSKDEVRRFKKLMQKAEAGSCEEHILPSSL 469
N+D+P + Y+HR GR+ R G+ G ++K++ + + QK EE LPS++
Sbjct: 353 NFDLPTQPENYLHRIGRSGRFGRKGVAINFVTKEDEGMLRDI-QKFYNVLVEE--LPSNV 409
Query: 470 IDAL 473
+ L
Sbjct: 410 AELL 413
>Medtr4g125970.2 | DEAD-box ATP-dependent RNA helicase | HC |
chr4:52326072-52330070 | 20130731
Length = 430
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 99/424 (23%), Positives = 182/424 (42%), Gaps = 82/424 (19%)
Query: 57 AVWQETVGPGNFDRDLCVNSPTGSGKTLAYALPIVQMLSTRVAKCLRALVVVPTRDLAFQ 116
A+ Q + P D+ + +G+GKT + ++Q L V +C +ALV+ PTR+LA Q
Sbjct: 82 AIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQQLDYNVTQC-QALVLAPTRELAQQ 140
Query: 117 VKRVFDGVASPLGLRVGLAVGQSSVADEISELVHVPAREAGSCYDPQHALFVRFESKVDI 176
+++V + LG++V VG +SV ++ Q L + V +
Sbjct: 141 IEKVMRALGDYLGVKVHACVGGTSVRED------------------QRIL----STGVHV 178
Query: 177 LVATPGRLMDHINTTKGFTLEHLHYLVVDETDRLLREAYQSWLPTVLELAQSNDDSFSQP 236
+V TPGR+ D + + +++ V+DE D +L
Sbjct: 179 VVGTPGRVFDMLRR-QSLHPDYIKMFVLDEADEML------------------------- 212
Query: 237 ADSFFPCSVGALRTRRRCGVERGFKDKPYP-------RLAKMVLSATITQDPGKLVQLNL 289
RGFKD+ Y ++ V SAT+ + ++ + +
Sbjct: 213 --------------------SRGFKDQIYDIFQLLPGKIQVGVFSATMPPEALEITRKFM 252
Query: 290 HLPLFLRAGQMRYRLPENLESYKLICETKVKPLYLVALLKSLGGEKCIVFTKSVESTHRL 349
+ P+ + + L + Y + + + K L L ++L + ++F V + ++
Sbjct: 253 NKPVRILVKRDELTLEGIKQFYVNVEKEEWKLDTLCDLYETLAITQSVIF---VNTRRKV 309
Query: 350 CKLLNCFEDLQIDMKEYSGLQHQCVRSKTLTAFRKGEFQVLVSSDAMTRGMDVEGVRNVI 409
L + + G Q R + FR G +VL+++D + RG+DV+ V VI
Sbjct: 310 DWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVI 369
Query: 410 NYDMPKYIKTYVHRAGRTARAGQTGRCFTLMSKDEVRRFKKLMQKAEAGSCEEHILPSSL 469
N+D+P + Y+HR GR+ R G+ G ++K++ + + QK EE LPS++
Sbjct: 370 NFDLPTQPENYLHRIGRSGRFGRKGVAINFVTKEDEGMLRDI-QKFYNVLVEE--LPSNV 426
Query: 470 IDAL 473
+ L
Sbjct: 427 AELL 430
>Medtr3g107420.2 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr3:49555719-49561649 | 20130731
Length = 427
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 107/411 (26%), Positives = 181/411 (44%), Gaps = 72/411 (17%)
Query: 34 LLHPKLKSALESMGISSLFPVQLAVWQETVGPGNFDRDLCVNSPTGSGKTLAYALPIVQM 93
LL P+L A+ + S F V E + D+ + +G GKT + L +Q
Sbjct: 52 LLKPELLRAI----VDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
Query: 94 LSTRVAKCLRALVVVPTRDLAFQVKRVFDGVASPL-GLRVGLAVGQSSVADEISELVHVP 152
+ V + ALV+ TR+LA+Q+ F+ ++ L L+V + G ++ VH
Sbjct: 108 IDP-VPGQVSALVLCHTRELAYQICHEFERFSTYLPDLKVAVFYGGVNIK------VHKD 160
Query: 153 AREAGSCYDPQHALFVRFESKVDILVATPGRLMDHINTTKGFTLEHLHYLVVDETDRLLR 212
+ C PQ I+V TPGR++ + K +L+++ + V+DE D++L
Sbjct: 161 LLK-NEC--PQ------------IVVGTPGRIL-ALAREKNLSLKNVRHFVLDECDKMLE 204
Query: 213 EAYQSWLPTVLELAQSNDDSFSQPADSFFPCSVGALRTRRRCGVERGFKDKPYPRLAKMV 272
+L R+ V+ FK P+ + M+
Sbjct: 205 ----------------------------------SLDMRK--DVQDIFKLTPHDKQV-MM 227
Query: 273 LSATITQDPGKLVQLNLHLPLFLRAGQMRYRLPENLESYKLICETKVKPLYLVALLKSLG 332
SAT++++ + + + P+ + L + + + + K L LL +L
Sbjct: 228 FSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLKEEEKNRKLNDLLDALD 287
Query: 333 GEKCIVFTKSVESTHRLCKLL-NC-FEDLQIDMKEYSGLQHQCVRSKTLTAFRKGEFQVL 390
+ ++F KSV L +LL C F + I +SG+ + R K F++G ++L
Sbjct: 288 FNQVVIFVKSVSRAAELDRLLIECNFPSICI----HSGMSQE-ERLKRYRGFKEGHSRIL 342
Query: 391 VSSDAMTRGMDVEGVRNVINYDMPKYIKTYVHRAGRTARAGQTGRCFTLMS 441
V++D + RG+D+E V VINYDMP TY+HR GR R G G T +S
Sbjct: 343 VATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
>Medtr3g107420.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr3:49555719-49561649 | 20130731
Length = 427
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 107/411 (26%), Positives = 181/411 (44%), Gaps = 72/411 (17%)
Query: 34 LLHPKLKSALESMGISSLFPVQLAVWQETVGPGNFDRDLCVNSPTGSGKTLAYALPIVQM 93
LL P+L A+ + S F V E + D+ + +G GKT + L +Q
Sbjct: 52 LLKPELLRAI----VDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
Query: 94 LSTRVAKCLRALVVVPTRDLAFQVKRVFDGVASPL-GLRVGLAVGQSSVADEISELVHVP 152
+ V + ALV+ TR+LA+Q+ F+ ++ L L+V + G ++ VH
Sbjct: 108 IDP-VPGQVSALVLCHTRELAYQICHEFERFSTYLPDLKVAVFYGGVNIK------VHKD 160
Query: 153 AREAGSCYDPQHALFVRFESKVDILVATPGRLMDHINTTKGFTLEHLHYLVVDETDRLLR 212
+ C PQ I+V TPGR++ + K +L+++ + V+DE D++L
Sbjct: 161 LLK-NEC--PQ------------IVVGTPGRIL-ALAREKNLSLKNVRHFVLDECDKMLE 204
Query: 213 EAYQSWLPTVLELAQSNDDSFSQPADSFFPCSVGALRTRRRCGVERGFKDKPYPRLAKMV 272
+L R+ V+ FK P+ + M+
Sbjct: 205 ----------------------------------SLDMRK--DVQDIFKLTPHDKQV-MM 227
Query: 273 LSATITQDPGKLVQLNLHLPLFLRAGQMRYRLPENLESYKLICETKVKPLYLVALLKSLG 332
SAT++++ + + + P+ + L + + + + K L LL +L
Sbjct: 228 FSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLKEEEKNRKLNDLLDALD 287
Query: 333 GEKCIVFTKSVESTHRLCKLL-NC-FEDLQIDMKEYSGLQHQCVRSKTLTAFRKGEFQVL 390
+ ++F KSV L +LL C F + I +SG+ + R K F++G ++L
Sbjct: 288 FNQVVIFVKSVSRAAELDRLLIECNFPSICI----HSGMSQE-ERLKRYRGFKEGHSRIL 342
Query: 391 VSSDAMTRGMDVEGVRNVINYDMPKYIKTYVHRAGRTARAGQTGRCFTLMS 441
V++D + RG+D+E V VINYDMP TY+HR GR R G G T +S
Sbjct: 343 VATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
>Medtr6g039840.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr6:14348854-14341230 | 20130731
Length = 684
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 117/468 (25%), Positives = 198/468 (42%), Gaps = 81/468 (17%)
Query: 44 ESMGISSLFPVQLAVWQETVG-PGNFD-RDLCVNSPTGSGKTLAYALPIVQMLSTRVA-- 99
E MG +++ + +G P D + + + S TGSGKTLAY LP+VQ+L
Sbjct: 119 EVMGAVREMGIEVPTEIQCIGVPAVLDGKSVVLGSHTGSGKTLAYLLPLVQLLRRDEQMN 178
Query: 100 ------KCLRALVVVPTRDLAFQVKRVFDGVASPLGLRVGLAVGQSSVADEISELVHVPA 153
K RA+V+ PTR+L+ QV RV ++ R + G
Sbjct: 179 GLVLKPKRPRAVVLCPTRELSEQVFRVAKAISHHARFRCTMVSG---------------- 222
Query: 154 REAGSCYDPQHALFVRFESKVDILVATPGRLMDHINTTKGFTLEHLHYLVVDETDRLLRE 213
G PQ + +D++V TPGR++ HI + Y+V+DE D +
Sbjct: 223 ---GGRLRPQEE---SLSNPIDMVVGTPGRILQHIEEGN-MVYGDIQYVVLDEADTMFDR 275
Query: 214 AYQSWLPTVLELAQSNDDSFSQPADSFFPCSVGALRTRRRCGVERGFKDKPYPRLAKMVL 273
+ P + + S+P DS GF+ +++
Sbjct: 276 GFG---PDIKKFLAPLKHRASKP-DSL------------------GFQ--------TVLV 305
Query: 274 SATITQDPGKLVQLNLHLPLFLRAGQMRYRLPENLESYKLICETKVKPLYLVALLK-SLG 332
+AT+T+ LV + LR + ++ + + T+ K L+ +L+ SL
Sbjct: 306 TATMTKAVQNLVDEEFQGIVHLRTSSLHKKISNARHDFIKLSGTENKLDSLLQVLEPSLA 365
Query: 333 -GEKCIVFTKSVESTHRLCKLLNCFEDLQIDMKEYSGLQHQCVRSKTLTAFRKGEFQ--V 389
G + +VF ++ S+ + L E+ QI Y G R + L F+
Sbjct: 366 KGNRVMVFCNTLNSSRAVDHFL---EENQISTVNYHGEVPAAQRVENLNKFKSNNDDCPT 422
Query: 390 LVSSDAMTRGMDVEGVRNVINYDMPKYIKTYVHRAGRTARAGQTGRCFTLMSKDEVRRFK 449
LV +D RG+D++ V +VI +D P Y+HR GRTAR G G+ +L++K +
Sbjct: 423 LVCTDLAARGLDLD-VDHVIMFDFPLNSIDYLHRTGRTARMGAKGKITSLVTKKDY---- 477
Query: 450 KLMQKAEAGSCEEHILPSSLIDALHTTYQSALEKFKEILSERRKKPKE 497
+ A EE I + ++A+ T ++ + ++E+R+K K
Sbjct: 478 -----SLATKIEEAIKKNENLEAI-TKESVRMDVTRNQITEQRRKNKN 519
>Medtr1g012420.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr1:2463886-2455302 | 20130731
Length = 427
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 103/411 (25%), Positives = 179/411 (43%), Gaps = 72/411 (17%)
Query: 34 LLHPKLKSALESMGISSLFPVQLAVWQETVGPGNFDRDLCVNSPTGSGKTLAYALPIVQM 93
LL P+L A+ + S F V E + D+ + +G GKT + L +Q
Sbjct: 52 LLKPELLRAI----VDSGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLSTLQQ 107
Query: 94 LSTRVAKCLRALVVVPTRDLAFQVKRVFDGVASPLG-LRVGLAVGQSSVADEISELVHVP 152
+ V + AL++ TR+LA+Q+ F+ ++ L L+V + G ++
Sbjct: 108 IDP-VPGQVSALILCHTRELAYQICHEFERFSTYLADLKVAVFYGGVNIK---------- 156
Query: 153 AREAGSCYDPQHALFVRFESKVDILVATPGRLMDHINTTKGFTLEHLHYLVVDETDRLLR 212
H ++ E I+V TPGR++ + K +L+++ + ++DE D++L
Sbjct: 157 ----------VHKDLLKNECP-HIVVGTPGRIL-ALARDKDLSLKNVRHFILDECDKMLE 204
Query: 213 EAYQSWLPTVLELAQSNDDSFSQPADSFFPCSVGALRTRRRCGVERGFKDKPYPRLAKMV 272
+L R+ V+ FK P+ + M+
Sbjct: 205 ----------------------------------SLDMRK--DVQDIFKMTPHDKQV-MM 227
Query: 273 LSATITQDPGKLVQLNLHLPLFLRAGQMRYRLPENLESYKLICETKVKPLYLVALLKSLG 332
SAT++++ + + + P+ + L + + + + K L LL +L
Sbjct: 228 FSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLKEEEKNRKLNDLLDALD 287
Query: 333 GEKCIVFTKSVESTHRLCKLL-NC-FEDLQIDMKEYSGLQHQCVRSKTLTAFRKGEFQVL 390
+ ++F KSV L KLL C F + I +SG+ + R K F++G ++L
Sbjct: 288 FNQVVIFVKSVSRAAELDKLLVECNFPSICI----HSGMSQE-ERLKRYKGFKEGHTRIL 342
Query: 391 VSSDAMTRGMDVEGVRNVINYDMPKYIKTYVHRAGRTARAGQTGRCFTLMS 441
V++D + RG+D+E V VINYDMP TY+HR GR R G G T +S
Sbjct: 343 VATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
>Medtr4g112320.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr4:46124357-46130061 | 20130731
Length = 401
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 119/271 (43%), Gaps = 48/271 (17%)
Query: 174 VDILVATPGRLMDHINTTKGFTLEHLHYLVVDETDRLLREAYQSWLPTVLELAQSNDDSF 233
++I+VATPGRL+DH+ TK F +L L++DE DR+L ++ L +++L N +
Sbjct: 39 INIVVATPGRLLDHLQNTKRFIYNNLKCLIIDEADRILEANFEDELKQIIKLLPKNRQT- 97
Query: 234 SQPADSFFPCSVGALRTRRRCGVERGFKDKPYPRLAKMVLSATITQDPGKLVQLNLHL-P 292
+ SAT T+ L +L+ P
Sbjct: 98 -------------------------------------ALFSATQTKKVEDLARLSFQTTP 120
Query: 293 LFLRAGQMRYRLPEN--LESYKLI-CETKVKPLYLVALLKSLGGEKCIVFTKSVESTHRL 349
+++ R ++ L+ Y ++ C + LY + LK +K +VF S S
Sbjct: 121 IYIDVDDGRKKVTNEGLLQGYVVVPCAKRFMVLY--SFLKRHKSKKVMVFFSSCNSVKFH 178
Query: 350 CKLLNCFEDLQIDMKEYSGLQHQCVRSKTLTAFRKGEFQVLVSSDAMTRGMDVEGVRNVI 409
+ N + + G Q Q R+ T F + E +L+ +D RG+D+ V ++
Sbjct: 179 ADIFN---HIHLHCSSIYGKQKQQTRTTTFVDFCQAEKGILLCTDVAARGLDIPSVDWIL 235
Query: 410 NYDMPKYIKTYVHRAGRTARAGQTGRCFTLM 440
YD P K Y+HR GRTAR G+ G+ L+
Sbjct: 236 QYDPPDEPKEYIHRVGRTAR-GEDGKGNALL 265
>Medtr5g027840.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr5:11616617-11610718 | 20130731
Length = 523
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 105/400 (26%), Positives = 172/400 (43%), Gaps = 79/400 (19%)
Query: 53 PVQLAVWQETVGPGNFD-RDLCVNSPTGSGKTLAYALP-IVQMLSTRVAKCLR------A 104
P+Q W P D RDL + TGSGKTLA+ +P I+ +++ R +K
Sbjct: 126 PIQSRAW-----PFLLDGRDLIGIAATGSGKTLAFGIPAIMHVMNKRKSKGSSKGRNPLC 180
Query: 105 LVVVPTRDLAFQVKRVFDGVASPLGLRVGLAVGQSSVADEISELVHVPAREAGSCYDPQH 164
L++ PTR+LA Q+ V G+ G + +IS L
Sbjct: 181 LMLSPTRELAQQISDVLCDAGKSCGVESVCLYGGTPKGAQISAL---------------- 224
Query: 165 ALFVRFESKVDILVATPGRLMDHINTTKGFT-LEHLHYLVVDETDRLLREAYQSWLPTVL 223
+S +DI++ TPGR+ D + G L+ + ++V+DE DR+L ++ + ++L
Sbjct: 225 ------KSGIDIVIGTPGRIQDLVEM--GICRLQEVSFVVLDEADRMLDMGFEQIVRSIL 276
Query: 224 ELAQSNDDSFSQPADSFFPCSVGALRTRRRCGVERGFKDKPYPRLAKMVLSATITQDPGK 283
Q+ + +P +V L F D P K+V+ +
Sbjct: 277 --GQTCSARQMVMFSATWPLAVHHLAQE--------FMD---PNPVKVVVGSEDLSANHD 323
Query: 284 LVQLNLHLPLFLRAGQMRYRLPENLESYKLICETKVKPLYLVALLKSLGGEKCIVFTKSV 343
++Q+ L LR RL LE Y + +V +VF
Sbjct: 324 VMQIVEVLDERLR----DKRLLALLEKYHKSQKNRV-----------------LVFVLYK 362
Query: 344 ESTHRLCKLL--NCFEDLQIDMKEYSGLQHQCVRSKTLTAFRKGEFQVLVSSDAMTRGMD 401
T R+ K+L ++ + I SG + Q R+K L+ F+ G +++++D RG+D
Sbjct: 363 WETTRVEKMLQQGGWKAVSI-----SGDKSQHERTKALSLFKNGSCPLMIATDVAARGLD 417
Query: 402 VEGVRNVINYDMPKYIKTYVHRAGRTARAGQTGRCFTLMS 441
+ V VIN+ P ++ YVHR GRT RAG+ G T +
Sbjct: 418 IPDVEVVINFSFPLTLEDYVHRIGRTGRAGKKGVAHTFFT 457
>Medtr4g010565.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr4:2449773-2458512 | 20130731
Length = 504
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 103/411 (25%), Positives = 177/411 (43%), Gaps = 72/411 (17%)
Query: 34 LLHPKLKSALESMGISSLFPVQLAVWQETVGPGNFDRDLCVNSPTGSGKTLAYALPIVQM 93
LL P+L A+ + S F V E + D+ + +G GKT + L +Q
Sbjct: 129 LLKPELLRAI----VDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 184
Query: 94 LSTRVAKCLRALVVVPTRDLAFQVKRVFDGVASPL-GLRVGLAVGQSSVADEISELVHVP 152
+ V + ALV+ TR+LA+Q+ + ++ L ++V + G ++
Sbjct: 185 IDP-VPGQVAALVLCHTRELAYQICHEVERFSTYLPDIKVAVFYGGVNIK---------- 233
Query: 153 AREAGSCYDPQHALFVRFESKVDILVATPGRLMDHINTTKGFTLEHLHYLVVDETDRLLR 212
H ++ E I+V TPGR++ + K L+++ + ++DE D++L
Sbjct: 234 ----------VHKDLLKNECP-HIVVGTPGRIL-ALTRDKDLGLKNVRHFILDECDKMLE 281
Query: 213 EAYQSWLPTVLELAQSNDDSFSQPADSFFPCSVGALRTRRRCGVERGFKDKPYPRLAKMV 272
+L R+ V+ FK P+ + M+
Sbjct: 282 ----------------------------------SLDMRK--DVQEIFKLTPHDKQV-MM 304
Query: 273 LSATITQDPGKLVQLNLHLPLFLRAGQMRYRLPENLESYKLICETKVKPLYLVALLKSLG 332
SAT++++ + + + P+ + L + + + K L LL +L
Sbjct: 305 FSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLQEPEKNRKLNDLLDALD 364
Query: 333 GEKCIVFTKSVESTHRLCKLL-NC-FEDLQIDMKEYSGLQHQCVRSKTLTAFRKGEFQVL 390
+ ++F KSV L KLL C F + I +SG+ Q R K F++G+ ++L
Sbjct: 365 FNQVVIFVKSVSRAAELNKLLVECNFPSICI----HSGMS-QEERLKRYKGFKEGKQRIL 419
Query: 391 VSSDAMTRGMDVEGVRNVINYDMPKYIKTYVHRAGRTARAGQTGRCFTLMS 441
V++D + RG+D+E V VINYDMP TY+HR GR R G G T +S
Sbjct: 420 VATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 470
>Medtr8g032230.1 | DEAD-box helicase family protein | HC |
chr8:12119817-12118310 | 20130731
Length = 171
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 83/166 (50%), Gaps = 28/166 (16%)
Query: 39 LKSALESMGISSLFPVQL-AVWQETVGPGNFDRDLCVNSPTGSGKTLAYALPIVQMLSTR 97
L A E MG + +QL A+ Q G +D+ S TGSGKT A+ALPI+ L
Sbjct: 20 LVEAFEKMGWKNPKEIQLKAIPQALQG-----KDVIGFSQTGSGKTGAFALPILHALLDA 74
Query: 98 VAKCLRALVVVPTRDLAFQVKRVFDGVASPLGLRVGLAVGQSSVADEISELVHVPAREAG 157
A V+ PTR+LA+QV F+ + S +G++ + VGQ + + E+ P
Sbjct: 75 PRHGFFACVISPTRELAYQVPEQFEALGSEIGVKCAVLVGQMDMVQQSIEIAKGP----- 129
Query: 158 SCYDPQHALFVRFESKVDILVATPGRLMDHINTTKGFTLEHLHYLV 203
DI V TPGR++DH+ TKGF+L+ L YLV
Sbjct: 130 -----------------DIFVGTPGRVLDHLKNTKGFSLDRLKYLV 158
>Medtr8g097000.1 | DEAD-box ATP-dependent RNA helicase family
protein | HC | chr8:40729630-40725252 | 20130731
Length = 756
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 106/414 (25%), Positives = 174/414 (42%), Gaps = 109/414 (26%)
Query: 60 QETVGP----GNFDRDLCVNSPTGSGKTLAYALPIVQML-------STRVAKCLRALVVV 108
QET P GN D+ V + TG+GKT A+ LP ++ + ++ A + L++
Sbjct: 314 QETSLPICLEGN---DVMVKAKTGTGKTAAFLLPAIETVLKAMSSKTSHRAPPIYVLILC 370
Query: 109 PTRDLAFQVKRVFDGVASPLGLRVGLAVGQSSVADEISELVHVPAREAGSCYDPQHALFV 168
PTR+LA Q+ + + L+ VG ++ + V E+ C
Sbjct: 371 PTRELASQI-----AAEAKVLLKYHDGVGVQTLVGGVRFKVDQKRLESDPC--------- 416
Query: 169 RFESKVDILVATPGRLMDHINTTKGFTLE--HLHYLVVDETDRLLREAYQSWLPTVLELA 226
+LVATPGRL+DHI G ++ L L++DE D LL
Sbjct: 417 ------QMLVATPGRLLDHIENKTGISVRVMGLQMLILDEADHLL--------------- 455
Query: 227 QSNDDSFSQPADSFFPCSVGALRTRRRCGVERGFKDKPYPRLAK-MVLSATITQDPGKLV 285
D F + + C PR + ++ SATI ++ ++
Sbjct: 456 ---DLGFRKDIEKIVDC---------------------LPRQRQSLLFSATIPKEVRRVS 491
Query: 286 QLNLHLPLFLRAGQMRYRLPENLESYKLIC-ET--KVKPLYLVA-----------LLKSL 331
QL L R + +++ + C ET +VK YL+A +LK
Sbjct: 492 QLVLK------------REHKYVDTVGMGCVETPVQVKQSYLIAPHESHFQIVHHILKEH 539
Query: 332 GGE----KCIVFTKSVESTHRLCKLLNCFEDLQIDMKEYSGLQHQCVRSKTLTAFRKGEF 387
+ K IVF + T LL D++++++E + Q R++ F++ +
Sbjct: 540 ISQTPDYKVIVFCITGMVTSLTYHLLR---DMKLNVREIHSRKPQLYRTRVSDEFKESKQ 596
Query: 388 QVLVSSDAMTRGMDVEGVRNVINYDMPKYIKTYVHRAGRTARAGQTGRCFTLMS 441
+LVSSD +RGM+ V VI +P + Y+HR GRT R G+ G+ L++
Sbjct: 597 MILVSSDVTSRGMNYPDVTLVIQVGIPSDREQYIHRLGRTGREGKEGKGILLIA 650
>Medtr8g027770.1 | DEAD-box ATP-dependent RNA helicase family
protein | HC | chr8:10111776-10105760 | 20130731
Length = 668
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 109/424 (25%), Positives = 175/424 (41%), Gaps = 91/424 (21%)
Query: 41 SALESMGISSLFPVQLAVWQETVGPGNFD-RDLCVNSPTGSGKTLAYALPIVQML----- 94
S L GI ++ V QE P +D+ + TG+GKT+A+ LP ++++
Sbjct: 208 SPLSLKGIKDAGYEKMTVVQEATLPVILKGKDVLAKAKTGTGKTVAFLLPSIEVVVKSPP 267
Query: 95 STRVAK--CLRALVVVPTRDLAFQVKRVFDGVASPL-----GLRVGLAVGQSSVADEISE 147
S R + + LV+ PTR+LA Q A+ L + V + +G + +A E
Sbjct: 268 SDRDQRRPPIFVLVICPTRELACQAA----AEATKLLKYHPTIGVQVVIGGTRLALEQKR 323
Query: 148 LVHVPAREAGSCYDPQHALFVRFESKVDILVATPGRLMDHINTTKGFT--LEHLHYLVVD 205
+ +A C ILVATPGRL DHI T GF L + LV+D
Sbjct: 324 M------QANPC---------------QILVATPGRLRDHIENTAGFASRLMGVKSLVLD 362
Query: 206 ETDRLL----REAYQSWLPTVLELAQSNDDSFSQPADSFFPCSVGALRTRRRCGVERGFK 261
E D LL R+ + + + + Q+ S + P + C V R +
Sbjct: 363 EADHLLDMGFRKDIEKIIAAIPKQRQTLMFSATIPDEVRQVCHVALKRDFEYINTVQEGS 422
Query: 262 DKPYPRLAKMVLSATITQDPGKLVQLNLHLPLFLRAGQMRYRLPENLESYKLICETKVKP 321
+ + ++ +M L A L+ H PL
Sbjct: 423 EDTHSQVRQMHLVAP----------LDKHFPL---------------------------- 444
Query: 322 LYLVALLKSLGGE----KCIVFTKSVESTHRLCKLLNCFEDLQIDMKEYSGLQHQCVRSK 377
L A+LK + K +VF + T + LL +L ++++E + Q R++
Sbjct: 445 --LYAILKEHIADDVDYKVLVFCTTAMVTRLVADLLG---ELNLNVREIHSRKPQSYRTR 499
Query: 378 TLTAFRKGEFQVLVSSDAMTRGMDVEGVRNVINYDMPKYIKTYVHRAGRTARAGQTGRCF 437
FRK + +LV+SD RG+D V V+ +P + Y+HR GRT R G+ G+
Sbjct: 500 VSDEFRKSKGLILVTSDVSARGVDYPDVTLVVQVGLPADKQQYIHRLGRTGRKGKEGQGI 559
Query: 438 TLMS 441
L++
Sbjct: 560 LLLA 563
>Medtr3g467550.3 | DEAD-box ATP-dependent RNA helicase | HC |
chr3:27857813-27867050 | 20130731
Length = 456
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 93/360 (25%), Positives = 154/360 (42%), Gaps = 79/360 (21%)
Query: 70 RDLCVNSPTGSGKTLAYALPIVQML----STRVAKCLRALVVVPTRDLAFQVKRVFDGVA 125
RDL + TGSGKT A+ +P++Q R ALV+ PTR+LA Q+++ +
Sbjct: 154 RDLLGCAETGSGKTAAFTIPMIQHCLAQPPIRRGDGPLALVLAPTRELAQQIEKEVQAFS 213
Query: 126 SPL-GLRVGLAVGQSSVADEISELVHVPAREAGSCYDPQHALFVRFESKVDILVATPGRL 184
L + + VG +++ + SEL AG V+I VATPGR
Sbjct: 214 RSLESFKTAIVVGGTNIEKQRSEL------RAG----------------VEIAVATPGRF 251
Query: 185 MDHINTTKGFT-LEHLHYLVVDETDRLLREAYQSWLPTVLELAQSNDDSFSQPADSFFPC 243
+DH+ +G T L + Y+V+DE DR+L ++ P + E+ +S +
Sbjct: 252 IDHLQ--QGNTSLSRISYVVLDEADRMLDMGFE---PQIREIMRSLPE------------ 294
Query: 244 SVGALRTRRRCGVERGFKDKPYPRLAKMVLSATITQDPGKLVQLNLHLPLFLRAGQMRYR 303
+ ++ SAT+ + L + L P+ ++ G++
Sbjct: 295 -----------------------KHQTLLFSATMPVEIEALSKEYLASPVQVKVGKVSSP 331
Query: 304 LPENLESYKLICET-KVKPLYLVALLKSLGGEKC-------IVFTKSVESTHRLCKLLNC 355
++ + E K+ L + + ++ EKC IVF VE R ++
Sbjct: 332 TTNVSQTLVKVSENEKIDRLLDLLVEEASQAEKCGHPFPLTIVF---VERKTRCDEVAEA 388
Query: 356 FEDLQIDMKEYSGLQHQCVRSKTLTAFRKGEFQVLVSSDAMTRGMDVEGVRNVINYDMPK 415
+ G + Q R L FR +LV++D +RG+DV GV +VIN D+PK
Sbjct: 389 LIAQGLSAVSLHGGRSQSEREAALHDFRSSSTSILVATDVASRGLDVTGVSHVINLDLPK 448
>Medtr2g043360.2 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr2:18890320-18881902 | 20130731
Length = 492
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 82/338 (24%), Positives = 141/338 (41%), Gaps = 79/338 (23%)
Query: 168 VRFESKVDILVATPGRLMDHINTTKGFTLEHLHYLVVDETDRLLREAYQSWLPTVLELAQ 227
R + IL+ATPGRL+DH+ T F +L +++ DE DR+L + + +L L
Sbjct: 43 ARLRKGISILIATPGRLLDHLKNTSSFVYTNLRWIIFDEADRILELGFGKEIQEILNL-- 100
Query: 228 SNDDSFSQPADSFFPCSVGALRTRRRCGVERGFKDKPYP---RLAKMVLSATITQDPGKL 284
+G+++T G + P P + ++LSAT+ + L
Sbjct: 101 -----------------LGSMKT----GHDDQGNGVPRPTKFQRQNLLLSATLNEKVNHL 139
Query: 285 VQLNLHLPLFLR--------AGQMR-----------------------YRLPENL-ESY- 311
+++L P+ + ++R Y++PE L + Y
Sbjct: 140 AKISLEDPVMIGIDDKVLEPTSKIRFDNSDCDEDNEGTYSSKIPAVGAYKVPEQLIQRYM 199
Query: 312 KLICETKVKPLYLVALLKSL----GGEKCIVFTKSVESTHRLCKLLNCF--------ED- 358
K+ C +++ L+++LK L +K ++F + ++ LL F E+
Sbjct: 200 KVPCGSRLA--ILLSILKHLFEREPSQKIVLFFSTCDAVDFHYSLLTEFLFSAFPQTEEG 257
Query: 359 -----LQIDMKEYSGLQHQCVRSKTLTAFRKGEFQVLVSSDAMTRGMDVEGVRNVINYDM 413
L G Q R+ + AF+ + +L+S+D RG+D VR +I YD
Sbjct: 258 NRPMFLGCKTLRLHGNMEQEDRTTSFQAFKTEKSALLLSTDVSARGLDFPNVRCIIQYDS 317
Query: 414 PKYIKTYVHRAGRTARAGQTGRCFTLMSKDEVRRFKKL 451
P YVHR GRTAR G+ G + E+ + L
Sbjct: 318 PGEATEYVHRVGRTARLGERGESLLFLQPSEIEYLQDL 355
>Medtr4g131750.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr4:54963018-54968467 | 20130731
Length = 480
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 99/371 (26%), Positives = 162/371 (43%), Gaps = 58/371 (15%)
Query: 70 RDLCVNSPTGSGKTLAYALPIVQMLSTRVAKCLRALVVVPTRDLAFQVKRVFDGVASPLG 129
RD +++ TGSGKTLAY L I ++STR + +ALV+VPTR+L QV +V
Sbjct: 119 RDCILHAQTGSGKTLAYLLLIYSIISTRKSS-FQALVLVPTRELGMQVTKV--------- 168
Query: 130 LRVGLAVGQSSVADEISELVHVPAREAGSCYDPQHALFVRFESKVDILVATPGRLMDHIN 189
R+ LA + V E + + G+ +H + + E I+VAT L +
Sbjct: 169 ARI-LAAKPTGVEGEQRSCTIMALLDGGTLR--RHKSWFKAEPPA-IVVATVESLCQMLE 224
Query: 190 TTKGFTLEHLHYLVVDETDRLLREAYQSWLPTVLELAQSNDDSFSQPADSFFPCSVGALR 249
+ F+L +L LVVDE D + + Q S + S+ C+
Sbjct: 225 R-QLFSLGNLRVLVVDEVDFIFNSSKQV-------------SSLRKILTSYSSCN----- 265
Query: 250 TRRRCGVERGFKDKPYPRLAKMVLSATITQDPGKLVQLNLHL-PLFLRAGQMRYRLPENL 308
+ F P+ + L+ + Q K +++H+ P+ +P L
Sbjct: 266 -----NRQTVFASASIPQHNQF-LNEAVQQKWTKRDVIHIHVSPV--------EPMPSRL 311
Query: 309 ESYKLICETKVKPLYLVALLKSLGGEKCIVFTK----------SVESTHRLCKLLNCFED 358
++C+ K K L++L++S E I+F + ST + L
Sbjct: 312 SHRFIVCDIKRKLQTLLSLIQSDAPESGIIFVSEQSEKSKKAGNSPSTSLVIDFLKTSYH 371
Query: 359 LQIDMKEYSGLQHQCVRSKTLTAFRKGEFQVLVSSDAMTRGMDVEGVRNVINYDMPKYIK 418
+D+ + R+ +L RKG +LV++D RG+D + ++ NYD+PK
Sbjct: 372 GSLDILLLEDDMNFNSRAASLLEVRKGGGYLLVATDVAARGVDFPEMTHIYNYDLPKTAI 431
Query: 419 TYVHRAGRTAR 429
Y+HRAGRT R
Sbjct: 432 DYLHRAGRTCR 442
>Medtr8g027780.1 | DEAD-box ATP-dependent RNA helicase family
protein | HC | chr8:10120030-10127066 | 20130731
Length = 573
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 105/407 (25%), Positives = 170/407 (41%), Gaps = 85/407 (20%)
Query: 55 QLAVWQETVGPGNFD-RDLCVNSPTGSGKTLAYALPIVQML-------STRVAKCLRALV 106
++ + QE P + +D+ + TG+GKT+A+ LP ++++ + + LV
Sbjct: 127 KMTIVQEATLPVILEGKDVLAKAKTGTGKTVAFLLPSIEVVVKSPPSDPGQSQTPILVLV 186
Query: 107 VVPTRDLAFQVKRVFDGVAS---PLGLRVGLAVGQSSVADEISELVHVPAREAGSCYDPQ 163
V PTR+LA Q + +G +V +G + + E + P +
Sbjct: 187 VCPTRELARQAAAEATKLLKYHPTIGAQV--VIGGTKIVSEQKRIQKNPCQ--------- 235
Query: 164 HALFVRFESKVDILVATPGRLMDHINTTKGF--TLEHLHYLVVDETDRLL----REAYQS 217
ILVATPGRL DHI T GF L L V+DE DRLL R+ +
Sbjct: 236 ------------ILVATPGRLKDHIAKTAGFASNLMGLKTFVIDEADRLLDMGFRKDIEE 283
Query: 218 WLPTVLELAQSNDDSFSQPADSFFPCSVGALRTRRRCGVERGFKDKPYPRLAKMVLSATI 277
+ +V + Q+ S + P C+V AL+ KD + + T
Sbjct: 284 IITSVPKQRQTLMFSATIPKAVHQVCNV-ALK-----------KDYEFINTVQEGTEETH 331
Query: 278 TQDPGKLVQLNLHLPLFLRAGQMRYRLPENLESYKLICETKVKPLYLVALLKSLGGE--- 334
+Q + Q++L PL K L V L + + E
Sbjct: 332 SQ----VRQMHLIAPL-----------------------DKHFSLLSVILKEHIADEVDY 364
Query: 335 KCIVFTKSVESTHRLCKLLNCFEDLQIDMKEYSGLQHQCVRSKTLTAFRKGEFQVLVSSD 394
K +VF + T + LL L ++++E + Q R++ FRK + +LV+SD
Sbjct: 365 KVLVFCTTAMVTSLVASLLG---KLDLNVREIYSRKKQGFRNRVSDEFRKSKRLILVTSD 421
Query: 395 AMTRGMDVEGVRNVINYDMPKYIKTYVHRAGRTARAGQTGRCFTLMS 441
RG+D V V+ +P + Y+HR GRT R G+ G+ L++
Sbjct: 422 VSARGVDYPDVSLVVQLGIPADKELYIHRLGRTGRIGKEGKGILLLA 468
>Medtr8g027775.1 | DEAD-box ATP-dependent RNA helicase family
protein | HC | chr8:10113462-10118856 | 20130731
Length = 569
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 98/388 (25%), Positives = 166/388 (42%), Gaps = 78/388 (20%)
Query: 70 RDLCVNSPTGSGKTLAYALPIVQML-------STRVAKCLRALVVVPTRDLAFQVKRVFD 122
+D+ + TG+GKT+A+ LP ++++ + + LVV PTR+LA Q
Sbjct: 139 KDVLAKAKTGTGKTVAFLLPSIEVVVKSPPNNRGQNQTPILVLVVCPTRELACQAAAEAT 198
Query: 123 GVAS---PLGLRVGLAVGQSSVADEISELVHVPAREAGSCYDPQHALFVRFESKVDILVA 179
+ +G +V +G +S++ E + P + IL+A
Sbjct: 199 KLLKYHPTIGAQV--VIGGTSLSSEQKRIQKNPCQ---------------------ILIA 235
Query: 180 TPGRLMDHINTTKGFT--LEHLHYLVVDETDRLL----REAYQSWLPTVLELAQSNDDSF 233
TPGRL DHI T GF L + LV+DE D+LL R+ + + +V + Q+ S
Sbjct: 236 TPGRLKDHIANTAGFASKLMGVKALVLDEADQLLDMGFRKDIEKIIASVPKQRQTLMFSA 295
Query: 234 SQPADSFFPCSVGALRTRRRCGVERGFKDKPYPRLAKMVLSATITQDPGKLVQLNLHLPL 293
+ P C+V AL+ KD + + T +Q + Q++L PL
Sbjct: 296 TIPDAVHQVCNV-ALK-----------KDFEFINTVQEGTEETHSQ----VRQMHLIAPL 339
Query: 294 FLRAGQMRYRLPENLESYKLICETKVKPLYLVALLKSLGGEKCIVFTKSVESTHRLCKLL 353
+ L E++ + KV A++ SL +
Sbjct: 340 DKHFSLLSVILKEHIADD---VDYKVLVFCTTAMVTSL--------------------VA 376
Query: 354 NCFEDLQIDMKEYSGLQHQCVRSKTLTAFRKGEFQVLVSSDAMTRGMDVEGVRNVINYDM 413
N L ++++E ++Q R++ FRK + +LV+SD RG+D V V+ +
Sbjct: 377 NLLGKLNLNVREIHSRKNQSYRTRVSDEFRKSKRLILVTSDVSARGVDYPDVSLVVQVGL 436
Query: 414 PKYIKTYVHRAGRTARAGQTGRCFTLMS 441
P + Y+HR GRT R G+ G+ L++
Sbjct: 437 PADKQQYIHRLGRTGRKGKEGKGILLLA 464
>Medtr1g061970.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr1:27069344-27076281 | 20130731
Length = 491
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 93/390 (23%), Positives = 155/390 (39%), Gaps = 79/390 (20%)
Query: 70 RDLCVNSPTGSGKTLAYALPIVQMLSTRVAKCLRALVVVPTRDLAFQVKRVFDGVASPLG 129
RDL + GSGKT + L ++ + + + +AL + PTR+LA Q V + G
Sbjct: 120 RDLIAQAHNGSGKTTCFNLGMLSRVDPNL-QAPQALCICPTRELAIQNIEVLRKMGKYTG 178
Query: 130 LRVGLAVGQSSVADEISELVHVPAREAGSCYDPQHALFVRFESKVDILVATPGRLMDHIN 189
+ AV D I + P +++ TPG M ++
Sbjct: 179 ISSECAVPMDR-RDSIPVMKRAPIM-------------------AQVVIGTPGT-MKNLI 217
Query: 190 TTKGFTLEHLHYLVVDETDRLLREAYQSWLPTVLELAQSNDDSFSQPADSFFPCSVGALR 249
T K + L LV DE D++L E D F S+ ++
Sbjct: 218 TYKKLGVTKLKILVFDEADQMLAE------------------------DGFRDDSLRIIK 253
Query: 250 TRRRCGVERGFKDKPYPRLAKMVLSATITQDPGKLVQLNLHLPLFLRAGQMRYRLPENLE 309
+ F L + T+ ++V H LF++ ++ + ++
Sbjct: 254 EIEK------FNSSCQVLLFSATFNETVKNFATRVVGKKEHNELFVKKEELSL---DAVK 304
Query: 310 SYKLICETKVKPL-----YLVALLKSLGGEKCIVFTKSVESTHRLCKLLNCFEDLQIDMK 364
YK++ ++ + Y+ L +++G + I+F ++ S L K L DL ++
Sbjct: 305 QYKVLVPDELVKIDVIKNYIFELGENVG--QTIIFVRTRNSAKMLHKAL---VDLGYEVT 359
Query: 365 EYSGLQHQCVRSKTLTAFRKGEFQVLVSSDAMTRGMDVEGVRNVINYDMP-KY------- 416
G R K + F+ G QVL+S+D + RG D + V VINYD+P KY
Sbjct: 360 SIQGALDHVDRDKIVKEFKDGLTQVLISTDVLARGFDQQQVNLVINYDLPLKYAAEYTHG 419
Query: 417 ------IKTYVHRAGRTARAGQTGRCFTLM 440
+ Y+HR GR R G+ G F L+
Sbjct: 420 HEQEPDYEVYLHRVGRAGRFGRKGAVFNLI 449
>Medtr4g049910.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr4:17617607-17621556 | 20130731
Length = 450
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 92/390 (23%), Positives = 155/390 (39%), Gaps = 95/390 (24%)
Query: 70 RDLCVNSPTGSGKTLAYALPIVQMLSTRVAKCLRALVVVPTRDLAFQVKRVFDGVASPLG 129
+DL + GSGKT + L ++ + + K +AL + PTR+LA Q V + G
Sbjct: 95 KDLIAQARNGSGKTTCFVLGMLSRVDPNM-KAPQALCICPTRELAIQNNEVLQKMGKYTG 153
Query: 130 LRVGLAVGQSSVADEISELVHVPAREAGSCYDPQHALFVRFESKVDILVATPGRLMDHIN 189
+ LA+ D+I P+R R +++ TPG + + +
Sbjct: 154 ISSELAIPS---MDKIP-----PSR--------------RPPIMAQVVIGTPGTI-NSLK 190
Query: 190 TTKGFTLEHLHYLVVDETDRLLRE--AYQSWLP--TVLELAQSNDDSFSQPADSFFPCSV 245
K + L LV DE D++L + + WL VL + + DD
Sbjct: 191 NHKKLGVTRLKILVFDEADQMLAQMMVTKDWLVFLQVLLFSATFDD-------------- 236
Query: 246 GALRTRRRCGVERGFKDKPYPRLAKMVLSATITQDPGKLVQLNLHLPLFLRAGQMRYRLP 305
T+ ++V H F++ ++
Sbjct: 237 ------------------------------TVKNFATRIVAKKEHNEYFVKKEELSL--- 263
Query: 306 ENLESYKLICETKVKPL-----YLVALLKSLGGEKCIVFTKSVESTHRLCKLLNCFEDLQ 360
E ++ YK+ C ++ + Y+ L +++G + I+F ++ S L K L D
Sbjct: 264 EAVKQYKVKCTDELAKIEVIKDYIFELGENVG--QTIIFVRTRNSAKMLHKSL---VDFG 318
Query: 361 IDMKEYSGLQHQCVRSKTLTAFRKGEFQVLVSSDAMTRGMDVEGVRNVINYDMP-KYIK- 418
++ G R + F+ G QVL+S+D ++RG D + V VINYD+P KY +
Sbjct: 319 YEVTSIQGALQTEERDTIIKEFKDGLTQVLISTDVLSRGFDQDQVNLVINYDLPLKYTRG 378
Query: 419 --------TYVHRAGRTARAGQTGRCFTLM 440
Y+HR GR R G+ G F L+
Sbjct: 379 QEPEPDCEVYLHRVGRAGRFGRKGAVFNLI 408
>Medtr1g046570.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr1:17543999-17545772 | 20130731
Length = 398
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 101/409 (24%), Positives = 167/409 (40%), Gaps = 72/409 (17%)
Query: 57 AVWQETVGPGNFDRDLCVNSPTGSGKTLAYALPIVQMLSTRVAKCLRALVVVPTRDLAFQ 116
++ Q + P + + P G+G + + I++ L + C +ALV+ PT +L Q
Sbjct: 15 SIQQRVIAPFCEGLGVILQDPYGTGMLETFCIGILKKLDYGLVHC-QALVLAPTMELVLQ 73
Query: 117 VKRVFDGVASPLGLRVGLAVGQSSVADEISELV------HVPAREAGSCYD--PQHALFV 168
+K V + G+++ VG +SV E + + YD F+
Sbjct: 74 IKEVMQDLGRFHGVKIHACVGGTSVPKEDRQRFLKVGYNSYIVEGTSNVYDIIDMDGQFI 133
Query: 169 RFESKVDILVATPGRLMDHINTTKGFT-LEHLHYLVVDETDRLLREAYQSWLPTVLELAQ 227
F+ V I+V TP + D + +G T L+ + V+DE D++L ++ + + +L
Sbjct: 134 -FKGGVHIIVGTPRCVYDMLQ--RGRTRLDCIKMFVMDEVDQMLSLGFKDKIDEIFKL-- 188
Query: 228 SNDDSFSQPADSFFPC--SVGALRTR---RRCGVERGFKDKPYPRLAKMVLSATITQDPG 282
PC VG + + R F KP TI P
Sbjct: 189 -------------LPCKIQVGVISATMPPEALEITRKFMKKP----------VTIQAKPD 225
Query: 283 KLVQLNLHLPLFLRAGQMRYRLPENLESYKLICETKVKPLYLVALLKSLGGEKCIVFTKS 342
+L G ++ + E +KL ET L KS+ CIVF +
Sbjct: 226 ELT----------LEGIKQFYVDVEKEEWKL--ETLCDIFELTVKAKSI--THCIVFVDT 271
Query: 343 VESTHRLCKLLNCFEDLQIDMKEYSGLQ---HQCVRSKTLTAF--RKGEFQVLVSSDAMT 397
CK+ + +Q + S +Q Q R + F + G VL+++D +
Sbjct: 272 ------RCKVDWLTDKMQSRDHKVSVIQSDMDQNTRDIIVREFFSQSGSPHVLITTDPLV 325
Query: 398 RGMDVEGVRNVINYDMPKYIKTYVHRAGRTARAGQTGRC--FTLMSKDE 444
G DV V ++NYD+P + Y++R GR R+GQ GRC M+KDE
Sbjct: 326 CGTDVHKVSLIVNYDLPAAPENYLYRIGR--RSGQFGRCVAINFMTKDE 372
>Medtr4g459350.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr4:21843191-21840034 | 20130731
Length = 276
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 76/165 (46%), Gaps = 28/165 (16%)
Query: 70 RDLCVNSPTGSGKTLAYALPIVQMLSTRVAKCLR-----ALVVVPTRDLAFQVKRVFDGV 124
R VN+ TG+GKT+AY PI+ L + + R ALV+VPTR+L QV + +
Sbjct: 79 RHALVNAATGTGKTIAYLAPIIHHLQSYDKRVQRSDGTFALVLVPTRELCLQVHEILQKL 138
Query: 125 ASPLGLRV-GLAVGQSSVADEISELVHVPAREAGSCYDPQHALFVRFESKVDILVATPGR 183
V G +G S + E + R + IL+ATPGR
Sbjct: 139 LHRFHWIVPGYIMGGESRSKEKA----------------------RLRKGISILIATPGR 176
Query: 184 LMDHINTTKGFTLEHLHYLVVDETDRLLREAYQSWLPTVLELAQS 228
L+DH+ T F +L +++ DE DR+L + + +L L S
Sbjct: 177 LLDHLKNTSSFVYTNLRWIIFDEADRILELGFGKEIQEILNLLGS 221
>Medtr6g039840.2 | DEAD-box ATP-dependent RNA helicase | HC |
chr6:14348848-14341230 | 20130731
Length = 508
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 95/399 (23%), Positives = 166/399 (41%), Gaps = 71/399 (17%)
Query: 103 RALVVVPTRDLAFQVKRVFDGVASPLGLRVGLAVGQSSVADEISELVHVPAREAGSCYDP 162
RA+V+ PTR+L+ QV RV ++ R + G G P
Sbjct: 12 RAVVLCPTRELSEQVFRVAKAISHHARFRCTMVSG-------------------GGRLRP 52
Query: 163 QHALFVRFESKVDILVATPGRLMDHINTTKGFTLEHLHYLVVDETDRLLREAYQSWLPTV 222
Q + +D++V TPGR++ HI + Y+V+DE D + + P +
Sbjct: 53 QEE---SLSNPIDMVVGTPGRILQHIEEG-NMVYGDIQYVVLDEADTMFDRGFG---PDI 105
Query: 223 LELAQSNDDSFSQPADSFFPCSVGALRTRRRCGVERGFKDKPYPRLAKMVLSATITQDPG 282
+ S+P DS GF+ ++++AT+T+
Sbjct: 106 KKFLAPLKHRASKP-DSL------------------GFQ--------TVLVTATMTKAVQ 138
Query: 283 KLVQLNLHLPLFLRAGQMRYRLPENLESYKLICETKVKPLYLVALLK-SLG-GEKCIVFT 340
LV + LR + ++ + + T+ K L+ +L+ SL G + +VF
Sbjct: 139 NLVDEEFQGIVHLRTSSLHKKISNARHDFIKLSGTENKLDSLLQVLEPSLAKGNRVMVFC 198
Query: 341 KSVESTHRLCKLLNCFEDLQIDMKEYSGLQHQCVRSKTLTAFRKGEFQ--VLVSSDAMTR 398
++ S+ + L E+ QI Y G R + L F+ LV +D R
Sbjct: 199 NTLNSSRAVDHFL---EENQISTVNYHGEVPAAQRVENLNKFKSNNDDCPTLVCTDLAAR 255
Query: 399 GMDVEGVRNVINYDMPKYIKTYVHRAGRTARAGQTGRCFTLMSKDEVRRFKKLMQKAEAG 458
G+D++ V +VI +D P Y+HR GRTAR G G+ +L++K + + A
Sbjct: 256 GLDLD-VDHVIMFDFPLNSIDYLHRTGRTARMGAKGKITSLVTKKDY---------SLAT 305
Query: 459 SCEEHILPSSLIDALHTTYQSALEKFKEILSERRKKPKE 497
EE I + ++A+ T ++ + ++E+R+K K
Sbjct: 306 KIEEAIKKNENLEAI-TKESVRMDVTRNQITEQRRKNKN 343
>Medtr3g118120.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr3:55283621-55286718 | 20130731
Length = 537
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 104/408 (25%), Positives = 168/408 (41%), Gaps = 67/408 (16%)
Query: 78 TGSGKTLAYALPIVQMLSTRVAKCLRA--------LVVVPTRDLAFQVKRVFDGVASPLG 129
+GSGKTLAY +PI+Q L + + L L++ PT +LA QV F S
Sbjct: 177 SGSGKTLAYLVPIIQRLRQQELQGLHKSSSQSPTLLILAPTAELASQV---FHNCRS--- 230
Query: 130 LRVGLAVGQSSVADEISELVHVPAREAGSCYDPQHALFVRFESKVDILVATPGRLMDHIN 189
+ +S V S LV R Q VD+L+ATPGR + IN
Sbjct: 231 ------ISKSGVVPFKSMLVTGGFR--------QKTQLDTLNQGVDVLIATPGRFLFLIN 276
Query: 190 TTKGFT-LEHLHYLVVDETDRLL-REAYQSWLPTVLELAQSNDDSFSQPADSFFPCSVGA 247
+GF L +L V+DE D L E ++ L ++ S P D+ +
Sbjct: 277 --QGFLHLTNLTCAVLDEVDILFGDEDFEKALQCLIS---------SSPVDTQYLFVTAT 325
Query: 248 LRTRRRCGVERGFKDKPYPRLAKMVLSATITQDPGKLVQLNLHLPLFLRAGQMRYRLPEN 307
L + F D +MV+ ++ + +L ++ + E+
Sbjct: 326 LPKNVYSKLVEVFPD------CEMVMGPSMHRINSRLEEIIVDCS------------GED 367
Query: 308 LESYKLICETKVKPLYLVALLKSLGGEKCIVFTKSVESTHRLCKLLNCFEDLQIDMK--E 365
+ L K L+ L + + IVF +E+ ++ LN F+ I M+
Sbjct: 368 GQEKTLDTAFLNKKAALLQLAEKNRVPRTIVFCNKIETCRKVENALNRFDRKGIRMQVLP 427
Query: 366 YSGLQHQCVRSKTLTAFRKGE----FQVLVSSDAMTRGMDVEGVRNVINYDMPKYIKTYV 421
+ Q R ++ F + Q +V +D +RG+D V +VI +D P+ YV
Sbjct: 428 FHAAMTQESRLASMKEFTRSPPKELSQFMVCTDRASRGIDFTRVDHVILFDYPRDPSEYV 487
Query: 422 HRAGRTARAGQ-TGRCFTLMSKDEVRRFKKLMQKAEAGSCEEHILPSS 468
R GRTAR + G+ F + +V +K+M++ G H +PS+
Sbjct: 488 RRVGRTARGARGQGKAFIFVVGKQVSLARKVMERNRKGH-PLHDVPSA 534
>Medtr4g105100.5 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr4:43543552-43548350 | 20130731
Length = 523
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 84/368 (22%), Positives = 153/368 (41%), Gaps = 83/368 (22%)
Query: 43 LESMGISSLFPVQLAVWQETVGPGNFDRDLCVNSPTGSGKTLAYALPIVQMLSTRV---- 98
+ +G P+Q W + RDL + TGSGKTL+Y LP + +S +
Sbjct: 216 IAKLGFVEPTPIQAQGWPMALT----GRDLIGIAETGSGKTLSYLLPAIVHVSAQPRLVQ 271
Query: 99 AKCLRALVVVPTRDLAFQVKRVFDGVASPLGLRVGLAVGQSSVADEISELVHVPAREAGS 158
+ LV+ PTR+LA Q+++ S +R G + +I +L
Sbjct: 272 GEGPVVLVLAPTRELAVQIQQEAMKFGSRSNIRCTCIYGGAPKGPQIRDL---------- 321
Query: 159 CYDPQHALFVRFESKVDILVATPGRLMDHINTTKGFTLEHLHYLVVDETDRLLREAYQSW 218
V+I++ATPGRL+D + + L+ + YLV+DE DR+L ++
Sbjct: 322 ------------RMGVEIVIATPGRLIDMLE-AQHTNLQRVTYLVLDEADRMLDMGFEPQ 368
Query: 219 LPTVLELAQSNDDSFSQPADSFFPCSVGALRTRRRCGVERGFKDKPYPRLAKMVLSATIT 278
+ ++ + + + A +P V +L R F PY K+V+ +
Sbjct: 369 IRKIVNQIRPDRQTLYWSAT--WPKEVESL--------ARQFLHNPY----KVVIGSP-- 412
Query: 279 QDPGKLVQLNLHLPLFLRAGQMRYRLPE---NLESYKLICETKVKPLYLVALLKS-LGGE 334
+L+A Q ++ E ++E Y L+ LLK + G
Sbjct: 413 ---------------YLKANQSINQVVEVVTDMEKYN----------RLIKLLKEVMDGS 447
Query: 335 KCIVFTKSVESTHRLCKLL--NCFEDLQIDMKEYSGLQHQCVRSKTLTAFRKGEFQVLVS 392
+ ++FT++ + ++ + L + + L I G ++Q R L F+ G ++ +
Sbjct: 448 RILIFTETKKGCDQVTRQLRMDGWPALSI-----HGDKNQAERDWVLAEFKSGRSPIMTA 502
Query: 393 SDAMTRGM 400
+D RG+
Sbjct: 503 TDVAARGL 510
>Medtr4g105100.3 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr4:43543552-43548350 | 20130731
Length = 523
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 84/368 (22%), Positives = 153/368 (41%), Gaps = 83/368 (22%)
Query: 43 LESMGISSLFPVQLAVWQETVGPGNFDRDLCVNSPTGSGKTLAYALPIVQMLSTRV---- 98
+ +G P+Q W + RDL + TGSGKTL+Y LP + +S +
Sbjct: 216 IAKLGFVEPTPIQAQGWPMALT----GRDLIGIAETGSGKTLSYLLPAIVHVSAQPRLVQ 271
Query: 99 AKCLRALVVVPTRDLAFQVKRVFDGVASPLGLRVGLAVGQSSVADEISELVHVPAREAGS 158
+ LV+ PTR+LA Q+++ S +R G + +I +L
Sbjct: 272 GEGPVVLVLAPTRELAVQIQQEAMKFGSRSNIRCTCIYGGAPKGPQIRDL---------- 321
Query: 159 CYDPQHALFVRFESKVDILVATPGRLMDHINTTKGFTLEHLHYLVVDETDRLLREAYQSW 218
V+I++ATPGRL+D + + L+ + YLV+DE DR+L ++
Sbjct: 322 ------------RMGVEIVIATPGRLIDMLE-AQHTNLQRVTYLVLDEADRMLDMGFEPQ 368
Query: 219 LPTVLELAQSNDDSFSQPADSFFPCSVGALRTRRRCGVERGFKDKPYPRLAKMVLSATIT 278
+ ++ + + + A +P V +L R F PY K+V+ +
Sbjct: 369 IRKIVNQIRPDRQTLYWSAT--WPKEVESL--------ARQFLHNPY----KVVIGSP-- 412
Query: 279 QDPGKLVQLNLHLPLFLRAGQMRYRLPE---NLESYKLICETKVKPLYLVALLKS-LGGE 334
+L+A Q ++ E ++E Y L+ LLK + G
Sbjct: 413 ---------------YLKANQSINQVVEVVTDMEKYN----------RLIKLLKEVMDGS 447
Query: 335 KCIVFTKSVESTHRLCKLL--NCFEDLQIDMKEYSGLQHQCVRSKTLTAFRKGEFQVLVS 392
+ ++FT++ + ++ + L + + L I G ++Q R L F+ G ++ +
Sbjct: 448 RILIFTETKKGCDQVTRQLRMDGWPALSI-----HGDKNQAERDWVLAEFKSGRSPIMTA 502
Query: 393 SDAMTRGM 400
+D RG+
Sbjct: 503 TDVAARGL 510
>Medtr4g105100.4 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr4:43543552-43548350 | 20130731
Length = 523
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 84/368 (22%), Positives = 153/368 (41%), Gaps = 83/368 (22%)
Query: 43 LESMGISSLFPVQLAVWQETVGPGNFDRDLCVNSPTGSGKTLAYALPIVQMLSTRV---- 98
+ +G P+Q W + RDL + TGSGKTL+Y LP + +S +
Sbjct: 216 IAKLGFVEPTPIQAQGWPMALT----GRDLIGIAETGSGKTLSYLLPAIVHVSAQPRLVQ 271
Query: 99 AKCLRALVVVPTRDLAFQVKRVFDGVASPLGLRVGLAVGQSSVADEISELVHVPAREAGS 158
+ LV+ PTR+LA Q+++ S +R G + +I +L
Sbjct: 272 GEGPVVLVLAPTRELAVQIQQEAMKFGSRSNIRCTCIYGGAPKGPQIRDL---------- 321
Query: 159 CYDPQHALFVRFESKVDILVATPGRLMDHINTTKGFTLEHLHYLVVDETDRLLREAYQSW 218
V+I++ATPGRL+D + + L+ + YLV+DE DR+L ++
Sbjct: 322 ------------RMGVEIVIATPGRLIDMLE-AQHTNLQRVTYLVLDEADRMLDMGFEPQ 368
Query: 219 LPTVLELAQSNDDSFSQPADSFFPCSVGALRTRRRCGVERGFKDKPYPRLAKMVLSATIT 278
+ ++ + + + A +P V +L R F PY K+V+ +
Sbjct: 369 IRKIVNQIRPDRQTLYWSAT--WPKEVESL--------ARQFLHNPY----KVVIGSP-- 412
Query: 279 QDPGKLVQLNLHLPLFLRAGQMRYRLPE---NLESYKLICETKVKPLYLVALLKS-LGGE 334
+L+A Q ++ E ++E Y L+ LLK + G
Sbjct: 413 ---------------YLKANQSINQVVEVVTDMEKYN----------RLIKLLKEVMDGS 447
Query: 335 KCIVFTKSVESTHRLCKLL--NCFEDLQIDMKEYSGLQHQCVRSKTLTAFRKGEFQVLVS 392
+ ++FT++ + ++ + L + + L I G ++Q R L F+ G ++ +
Sbjct: 448 RILIFTETKKGCDQVTRQLRMDGWPALSI-----HGDKNQAERDWVLAEFKSGRSPIMTA 502
Query: 393 SDAMTRGM 400
+D RG+
Sbjct: 503 TDVAARGL 510
>Medtr4g105100.2 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr4:43543552-43548350 | 20130731
Length = 523
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 84/368 (22%), Positives = 153/368 (41%), Gaps = 83/368 (22%)
Query: 43 LESMGISSLFPVQLAVWQETVGPGNFDRDLCVNSPTGSGKTLAYALPIVQMLSTRV---- 98
+ +G P+Q W + RDL + TGSGKTL+Y LP + +S +
Sbjct: 216 IAKLGFVEPTPIQAQGWPMALT----GRDLIGIAETGSGKTLSYLLPAIVHVSAQPRLVQ 271
Query: 99 AKCLRALVVVPTRDLAFQVKRVFDGVASPLGLRVGLAVGQSSVADEISELVHVPAREAGS 158
+ LV+ PTR+LA Q+++ S +R G + +I +L
Sbjct: 272 GEGPVVLVLAPTRELAVQIQQEAMKFGSRSNIRCTCIYGGAPKGPQIRDL---------- 321
Query: 159 CYDPQHALFVRFESKVDILVATPGRLMDHINTTKGFTLEHLHYLVVDETDRLLREAYQSW 218
V+I++ATPGRL+D + + L+ + YLV+DE DR+L ++
Sbjct: 322 ------------RMGVEIVIATPGRLIDMLE-AQHTNLQRVTYLVLDEADRMLDMGFEPQ 368
Query: 219 LPTVLELAQSNDDSFSQPADSFFPCSVGALRTRRRCGVERGFKDKPYPRLAKMVLSATIT 278
+ ++ + + + A +P V +L R F PY K+V+ +
Sbjct: 369 IRKIVNQIRPDRQTLYWSAT--WPKEVESL--------ARQFLHNPY----KVVIGSP-- 412
Query: 279 QDPGKLVQLNLHLPLFLRAGQMRYRLPE---NLESYKLICETKVKPLYLVALLKS-LGGE 334
+L+A Q ++ E ++E Y L+ LLK + G
Sbjct: 413 ---------------YLKANQSINQVVEVVTDMEKYN----------RLIKLLKEVMDGS 447
Query: 335 KCIVFTKSVESTHRLCKLL--NCFEDLQIDMKEYSGLQHQCVRSKTLTAFRKGEFQVLVS 392
+ ++FT++ + ++ + L + + L I G ++Q R L F+ G ++ +
Sbjct: 448 RILIFTETKKGCDQVTRQLRMDGWPALSI-----HGDKNQAERDWVLAEFKSGRSPIMTA 502
Query: 393 SDAMTRGM 400
+D RG+
Sbjct: 503 TDVAARGL 510
>Medtr1g009617.1 | DEAD-box ATP-dependent RNA helicase-like protein
| LC | chr1:1383737-1377649 | 20130731
Length = 400
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
Query: 372 QCVRSKTLTAFRKGEFQVLVSSDAMTRGMDVEGVRNVINYDMPKYIKTYVHRAGRTARAG 431
Q + ++L AF+ GE+ +L+ SD +++G+D+ V VINY++P+Y K Y++R G T A
Sbjct: 180 QAKKLRSLNAFKSGEYNILLCSDFLSKGLDIPAVDMVINYNIPRYPKDYIYRVGWT--AA 237
Query: 432 QTGRCFTLMSKDEVRRFKKL 451
+ +S DE R F +
Sbjct: 238 HVNVAISFVSPDERRHFNMI 257
>Medtr0915s0010.1 | DEAD-box ATP-dependent RNA helicase | HC |
scaffold0915:3555-1057 | 20130731
Length = 282
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 84/171 (49%), Gaps = 29/171 (16%)
Query: 58 VWQETVGPGNFDRDLCVNSPTGSGKTLAYALPIVQMLSTRVAKCLRALVVVPTRDLAFQV 117
+ +E++ D+ + G+GKT A+++P ++ + ++ +++VPTR+LA Q
Sbjct: 14 IQEESIPIALTGSDILARAKNGTGKTAAFSIPALEKIDQD-NNIIQVVILVPTRELALQT 72
Query: 118 KRVFDGVASPLGLRVGLAVGQSSVADEISELVHVPAREAGSCYDPQHALFVRFESKVDIL 177
+V + L ++V + G +S+ D+I L Y P H +L
Sbjct: 73 SQVCKELGKHLQIQVMVTTGGTSLKDDIMRL-----------YQPVH-----------LL 110
Query: 178 VATPGRLMDHINTTKGF-TLEHLHYLVVDETDRLLREAYQSWLPTVLELAQ 227
V TPGR++D KG L+ LV+DE D+LL +Q P++ +L Q
Sbjct: 111 VGTPGRILDL--AKKGVCVLKDCSMLVMDEADKLLSPEFQ---PSIEQLIQ 156
>Medtr8g018370.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr8:6241938-6240697 | 20130731
Length = 325
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 104/221 (47%), Gaps = 12/221 (5%)
Query: 256 VERGFKDKPYPRLAKMVLSATITQDPGKLVQLNLHLPLFLRAGQMRYRLPENLESYKLIC 315
+++ F+ PY ++ V+S+T+ + ++ + + P+ ++A + E ++ + +
Sbjct: 113 IDKIFQLLPY-KIQVGVISSTMPPEALEITRKFMKKPVTIQAKRDELTTLEGIKQFYVNV 171
Query: 316 ET---KVKPLYLVALLKSLGGEKCIVFTKSVESTHRLCKLLNCFEDLQIDMKEYSGLQHQ 372
+ K++ LY + K + CIVF V + ++ L++ + Q
Sbjct: 172 DEEKWKLETLYDIYTTKFI--THCIVF---VNTERKVDWLMDKMRSRYYTVLTIHDDMDQ 226
Query: 373 CVRSKTLTAFRKGEFQVLVSSDAMTRGMDVEGVRNVINYDMPKYIKTYVHRAGRTARAGQ 432
R + F+ G Q+L+++D + G+DV+ V VINYD+P + Y+HR R G+
Sbjct: 227 NTRDIIVRNFQSGSPQILITTDPLVYGLDVQEVSLVINYDLPTLPENYLHRICHKGRFGR 286
Query: 433 TGRCFTLMSKDEVRRFKKLMQKAEAGSCEEHILPSSLIDAL 473
G ++ D+ R + QK EE LPS+ D L
Sbjct: 287 KGVAINFVTLDDFRMLSDI-QKLSNVIIEE--LPSNFADLL 324
>Medtr1g022305.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr1:7041752-7035027 | 20130731
Length = 462
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 65/147 (44%), Gaps = 40/147 (27%)
Query: 70 RDLCVNSPTGSGKTLAYALPIVQMLSTRVAKCLRALVVVPTRDLAFQVKRVFDGVASPLG 129
+D+ SP SGKT A+ LPI Q L + AF++ R F+ + G
Sbjct: 41 KDVYAISPPRSGKTGAFVLPIFQAL-----------------NFAFEIARYFEALGQHFG 83
Query: 130 LRVGLAVGQSSVADEISELVHVPAREAGSCYDPQHALFVRFESKVDILVATPGRLMDHIN 189
++ + V S + + ++++ P I+VATPG+L+ H+
Sbjct: 84 VKFAVLVSTSDMEYQTNKILQQP----------------------HIIVATPGKLVKHLK 121
Query: 190 TTKGFTLEHLHYLVVDETDRLLREAYQ 216
T F+L L YLV+DE LL Y+
Sbjct: 122 DTPAFSLRKLKYLVLDEA-HLLESNYK 147
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 46/80 (57%), Gaps = 3/80 (3%)
Query: 372 QCVRSKTLTAFRKGEFQVLVSSDAMTRGMDVEGVRNVINYDMPKYIKTYVHRAGRTARAG 431
Q R + L AF+ G ++L+ +D +RG+D+ V VINYD+P + Y+H G +A
Sbjct: 223 QAKRLEALNAFKSGNCKILLCNDLASRGLDIPAVDTVINYDIPDDPRDYMHHVG---QAA 279
Query: 432 QTGRCFTLMSKDEVRRFKKL 451
TG + +S +E R F+ +
Sbjct: 280 PTGVAISFVSPNEARWFEMI 299
>Medtr0427s0010.1 | DEAD-box RNA helicase family protein | HC |
scaffold0427:505-2043 | 20130731
Length = 227
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 51/104 (49%), Gaps = 18/104 (17%)
Query: 367 SGLQHQCVRSKTLTAFRKGEFQVLVSSDAMTRGMDVEGVRNVINYDMP-KYI-------- 417
L+H+ R K + F+ G VL+S+D + RG D + V VINYD+P Y
Sbjct: 97 DALEHE-ERDKMVKEFKDGSTGVLISNDVLARGFDQDQVNLVINYDLPLNYTAEITCGGK 155
Query: 418 -----KTYVHRAGRTARAGQTGRCFTLMSKDEVRRFKKLMQKAE 456
+ Y HR GR R G+ G F L+ + R +KLM K E
Sbjct: 156 PELDCEVYFHRVGRAGRFGRKGAVFNLICDE---RDEKLMSKIE 196
>Medtr8g062720.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr8:26237354-26229767 | 20130731
Length = 594
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 66/135 (48%), Gaps = 28/135 (20%)
Query: 332 GGEKCIVFTKSVESTHRLCKLLNCFEDLQIDMKEYSGLQ-----HQCV---RSKTLTAF- 382
G + +VF +VE+ + K+L Y+GL+ C R++TL F
Sbjct: 434 GIHRTMVFANTVEAVEAVVKILG-----------YAGLECLRYHKNCTLDERAQTLVDFY 482
Query: 383 RKGEFQVLVSSDAMTRGMDVEGVRNVINYDMPKYIKTYVHRAGRTARAGQTGRCFTLMSK 442
KG VLV +DA RG+D+ V +VI D ++HR GRTARAGQ G ++ ++
Sbjct: 483 DKG--GVLVCTDAAARGVDIPNVSHVIQADFATSAVDFLHRIGRTARAGQIGLVTSMYTE 540
Query: 443 ------DEVRRFKKL 451
D VRR +L
Sbjct: 541 SNRELVDAVRRAGEL 555
>Medtr8g042690.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr8:16475815-16482952 | 20130731
Length = 462
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 86/388 (22%), Positives = 149/388 (38%), Gaps = 80/388 (20%)
Query: 71 DLCVNSPTGSGKTLAYALPIVQMLSTRVAK---CLRALVVVPTRDLAFQVKRVFDGVA-- 125
DL S GSGKTLAY +P + L + + +V+ P +A Q+ R +
Sbjct: 56 DLAAYSSNGSGKTLAYLIPALDHLCKNKYEPDDGIIVMVLCPNTMVAIQIDRDIKTILKD 115
Query: 126 SPLGLRVGLAVGQSSVADEISELVHVPAREAGSCYDPQHALFVRFESKVDILVATPGRL- 184
SP L+ I L+ P R+ K ++L+ATP L
Sbjct: 116 SPQTLQT------------IGRLIASPGD--------------RYVRK-NLLIATPAGLR 148
Query: 185 MDHINTTKGFTLEHLHYLVVDETDRLLREAYQS-WLPTVLELAQSNDDSFSQPADSFFPC 243
H + + L +L+ D+ +LR + Q W +SN P +
Sbjct: 149 YHHAYDPERIKYDKLKFLIFDDPYLILRFSDQKKW-----NWVRSN-----FPKEQLQIA 198
Query: 244 SVGALRTRRRCGVE---RGFKDKPYPRLAKMVLSATITQDPGKLVQLNLHLPLFLRAGQM 300
+ +R C + G + + + ++ +T D +L Q + +P
Sbjct: 199 IFSVTKLKRECLLRLLPEGRRPGDFSVIDEVQNRQWVTND--RLEQEFILVP-------- 248
Query: 301 RYRLPENLESYKLICETKVKPLYLVALLKSLGGEKCIVFTKSVESTHRLCKLLNCFEDLQ 360
C ++ LY+ +LK+ +K +VF + ES +L
Sbjct: 249 --------------CAKRLITLYI--MLKTTKSKKVMVFFSTTESVKFHEELFTF----- 287
Query: 361 IDMKEYS--GLQHQCVRSKTLTAFRKGEFQVLVSSDAMTRGMDVEGVRNVINYDMPKYIK 418
+D+K Y G Q SK +F E +L+ ++ G+++ V ++ YD P +
Sbjct: 288 LDVKCYGVHGDQTVSEHSKIYYSFSNAEEMILLCTNIAAFGLNIPDVDLIVQYDPPIDPE 347
Query: 419 TYVHRAGRTARAGQTGRCFTLMSKDEVR 446
Y+H+ GRTAR + G + E+R
Sbjct: 348 EYIHKVGRTARGTRKGNALLFLMPHELR 375
>Medtr4g068990.2 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr4:25904178-25909316 | 20130731
Length = 535
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 73/313 (23%), Positives = 121/313 (38%), Gaps = 65/313 (20%)
Query: 188 INTTKGFTLEHLHYLVVDETDRLLREAYQSWLPTVLELAQSNDDSFSQPADSFFPCSVGA 247
++ T F + LV+DE DR+L ++ L + +
Sbjct: 1 MDETPNFDCSKMQVLVLDEADRILDSGFKKELNAI----------------------ISQ 38
Query: 248 LRTRRRCGVERGFKDKPYPRLAKMVLSATITQDPGKLVQLNLHLPLFLRAGQMRYR-LPE 306
L RR+ M+ SAT T+ L +L+L P ++ + P
Sbjct: 39 LPKRRQT----------------MLFSATQTKSVQDLARLSLKDPEYISVHEESVTATPT 82
Query: 307 NLESYKLICETKVKPLYLVALLKSLGGEKCIVFTKSVESTHRLCKLLN-CFEDLQIDMKE 365
L+ +I K L +K+ K +VF S CK + FE + K
Sbjct: 83 LLKQKVMIVPLDQKLDMLWNFIKTHLKSKTLVFLSS-------CKQVKFVFEAFK---KL 132
Query: 366 YSGLQHQCVRSKTLTAFRKG---EF----QVLVSSDAMTRGMDVE-GVRNVINYDMPKYI 417
+ G+ +C+ + R EF +L ++D RG+D V V+ D P+ +
Sbjct: 133 HPGIPLKCLHGRMKQEKRMAIYSEFCEKCSILFATDVAARGLDFNRAVDWVVQVDCPENV 192
Query: 418 KTYVHRAGRTARAGQTGRCFTLMSKDEVRRFKKLMQKAEAGSCEEHILP---SSLIDALH 474
+Y+HR GRTAR G+ + E K+++K EAG H P L+ +
Sbjct: 193 ASYIHRVGRTARYKSLGKSVLYLLPSET----KMLEKLEAGKVPVHYPPKPRKELLQPVS 248
Query: 475 TTYQSALEKFKEI 487
+ S L K+ E+
Sbjct: 249 SLLASLLVKYPEL 261
>Medtr5g092560.2 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr5:40426461-40421694 | 20130731
Length = 536
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 104/268 (38%), Gaps = 45/268 (16%)
Query: 188 INTTKGFTLEHLHYLVVDETDRLLREAYQSWLPTVLELAQSNDDSFSQPADSFFPCSVGA 247
++ T F + LV+DE DR+L ++ + + +
Sbjct: 1 MDETPNFDCSQMQVLVLDEADRILDSGFKKEVNAI----------------------ISQ 38
Query: 248 LRTRRRCGVERGFKDKPYPRLAKMVLSATITQDPGKLVQLNLHLPLFLRAGQMRYR-LPE 306
L RR+ M+ SAT T+ L +L+L P ++ + P
Sbjct: 39 LPKRRQT----------------MLFSATQTKSVQDLARLSLKDPEYISVHEESVTATPT 82
Query: 307 NLESYKLICETKVKPLYLVALLKSLGGEKCIVFTKSVESTHRLCKLLNCFEDLQ--IDMK 364
L+ +I K L +K K +VF + S ++ + F+ L I +K
Sbjct: 83 LLKQTVMIVPLDQKLDMLWTFIKRHLQSKTLVF---LSSCKQVKFVFEVFKKLHPGIPLK 139
Query: 365 EYSGLQHQCVRSKTLTAFRKGEFQVLVSSDAMTRGMDV-EGVRNVINYDMPKYIKTYVHR 423
G Q R + F + + VL S+D RG+D + V V+ D P+ + +Y+HR
Sbjct: 140 CLHGRMKQEKRMAIYSEFCEEKRSVLFSTDVAARGLDFNKAVDWVVQVDCPENVASYIHR 199
Query: 424 AGRTARAGQTGRCFTLMSKDEVRRFKKL 451
GRTAR G+ + E +KL
Sbjct: 200 VGRTARYNSVGKSVLFLLPSETMMHEKL 227
>Medtr4g077370.1 | DEAD-box helicase family protein | LC |
chr4:29630577-29632466 | 20130731
Length = 446
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 69/154 (44%), Gaps = 25/154 (16%)
Query: 78 TGSGKTLAYALPIVQMLSTRVAKCLRALVVVPTRDLAFQVKRVFDGVASPLGLRVGLAVG 137
TGSGKT A+ALPI+Q L + ALV+ PTR+LA Q+ F + S L L + + VG
Sbjct: 295 TGSGKTAAFALPILQRLG-ETPFGVFALVLTPTRELAVQLAHQFWILGSSLRLILTVVVG 353
Query: 138 QSSVADEISELVHVPAREAGSCYDPQHALFVRFESKVDILVATPGRL--MDHINTTKGFT 195
+ +LV P ++++ATP RL + N
Sbjct: 354 GLDKRIQAKQLVARP----------------------NLVIATPERLKILLQDNPEIAPI 391
Query: 196 LEHLHYLVVDETDRLLREAYQSWLPTVLELAQSN 229
+LV+DE D+LL +Q L + + N
Sbjct: 392 FAATKFLVLDEADQLLDVGFQEELKVIFQCLPEN 425