Miyakogusa Predicted Gene

Lj4g3v2225630.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2225630.1 CUFF.50539.1
         (186 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g124190.1 | cytidine/deoxycytidylate deaminase family prot...   320   5e-88
Medtr2g045280.1 | cytidine/deoxycytidylate deaminase family prot...   293   5e-80
Medtr1g081550.1 | cytidine/deoxycytidylate deaminase family prot...   229   9e-61
Medtr1g081420.1 | cytidine/deoxycytidylate deaminase family prot...   182   2e-46
Medtr1g081450.1 | cytidine/deoxycytidylate deaminase family prot...   168   2e-42
Medtr3g005755.1 | deoxycytidylate deaminase (cytidine deaminase)...   121   5e-28
Medtr1g081440.1 | cytidine/deoxycytidylate deaminase family prot...    86   2e-17
Medtr4g012000.4 | tRNA-specific adenosine deaminase | HC | chr4:...    76   2e-14
Medtr4g012000.3 | tRNA-specific adenosine deaminase | HC | chr4:...    76   2e-14
Medtr4g012000.2 | tRNA-specific adenosine deaminase | HC | chr4:...    75   2e-14
Medtr4g012000.1 | tRNA-specific adenosine deaminase | HC | chr4:...    75   2e-14
Medtr7g086830.1 | tRNA-specific adenosine deaminase | HC | chr7:...    50   2e-06
Medtr7g086830.2 | tRNA-specific adenosine deaminase | HC | chr7:...    50   2e-06

>Medtr4g124190.1 | cytidine/deoxycytidylate deaminase family protein
           | HC | chr4:51285975-51282495 | 20130731
          Length = 186

 Score =  320 bits (820), Expect = 5e-88,   Method: Compositional matrix adjust.
 Identities = 158/186 (84%), Positives = 161/186 (86%)

Query: 1   MEEVNVVETKDGTVSVATAFAGHQEAVQDRDHKFLGKAVEEAYKGVDCGHGGPFGAVIVR 60
           MEEVNVVETKDGTVSVATAFAGHQEAVQDRDHKFL +AVEEAYKGVDCG GGPFGAVIV 
Sbjct: 1   MEEVNVVETKDGTVSVATAFAGHQEAVQDRDHKFLRRAVEEAYKGVDCGDGGPFGAVIVH 60

Query: 61  NDEVVVSCHNMVLNHTDPTAHAEVTAIREACKKLNQIELSDCEIYASCEPCPMCFGAIHL 120
           NDEVV SCHNMVLN TDPTAHAEVTAIREACKKL QIELSDCEIYASCEPCPMCFGAIHL
Sbjct: 61  NDEVVASCHNMVLNFTDPTAHAEVTAIREACKKLKQIELSDCEIYASCEPCPMCFGAIHL 120

Query: 121 SRIKRLVYGAKXXXXXXXXXXXXXXXXLRGTGFYQKAQLEIKRADGNGALIAEEVFQKTK 180
           SRIKRLVYGAK                LRGTGFYQKA LEIKRADGN A+IAEEVF+KTK
Sbjct: 121 SRIKRLVYGAKAEAAIAIGFDDFIADALRGTGFYQKATLEIKRADGNEAVIAEEVFEKTK 180

Query: 181 EKFQMY 186
            KFQMY
Sbjct: 181 AKFQMY 186


>Medtr2g045280.1 | cytidine/deoxycytidylate deaminase family protein
           | HC | chr2:19893624-19896239 | 20130731
          Length = 200

 Score =  293 bits (751), Expect = 5e-80,   Method: Compositional matrix adjust.
 Identities = 139/183 (75%), Positives = 157/183 (85%)

Query: 4   VNVVETKDGTVSVATAFAGHQEAVQDRDHKFLGKAVEEAYKGVDCGHGGPFGAVIVRNDE 63
           + VV+ KDG+V+VA+AFAGH++A++DRDHKFL KAVEEAYKGV+C  GGPFGAVIV NDE
Sbjct: 18  LKVVQNKDGSVAVASAFAGHKQAIKDRDHKFLRKAVEEAYKGVECEDGGPFGAVIVLNDE 77

Query: 64  VVVSCHNMVLNHTDPTAHAEVTAIREACKKLNQIELSDCEIYASCEPCPMCFGAIHLSRI 123
           V+ SCHNMVL +TDP+AHAEVTAIREACKKL QIELS+CEIYASCEPCPMCFGAIHLSR+
Sbjct: 78  VIASCHNMVLRNTDPSAHAEVTAIREACKKLKQIELSECEIYASCEPCPMCFGAIHLSRV 137

Query: 124 KRLVYGAKXXXXXXXXXXXXXXXXLRGTGFYQKAQLEIKRADGNGALIAEEVFQKTKEKF 183
           KRLVYGAK                LRGTGFYQKAQLEIKRADGN A+IAEEVF+KTKEKF
Sbjct: 138 KRLVYGAKAEAAIAIGFDDFIADALRGTGFYQKAQLEIKRADGNEAIIAEEVFEKTKEKF 197

Query: 184 QMY 186
           +MY
Sbjct: 198 RMY 200


>Medtr1g081550.1 | cytidine/deoxycytidylate deaminase family protein
           | HC | chr1:36250141-36252652 | 20130731
          Length = 169

 Score =  229 bits (585), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 110/159 (69%), Positives = 127/159 (79%)

Query: 28  QDRDHKFLGKAVEEAYKGVDCGHGGPFGAVIVRNDEVVVSCHNMVLNHTDPTAHAEVTAI 87
           +DRD KF+ KAVEEAYKGV+CG G PFGAVIVRNDEVVVSCHNMVL + DPTAHAEVTAI
Sbjct: 11  EDRDQKFITKAVEEAYKGVECGDGRPFGAVIVRNDEVVVSCHNMVLRNKDPTAHAEVTAI 70

Query: 88  REACKKLNQIELSDCEIYASCEPCPMCFGAIHLSRIKRLVYGAKXXXXXXXXXXXXXXXX 147
           REAC+KL+QI L+DCEIYASCEPCPMCFGAI+LS+IKRLVYGAK                
Sbjct: 71  REACQKLDQIYLTDCEIYASCEPCPMCFGAINLSKIKRLVYGAKAEAAVAIGFDSFIADA 130

Query: 148 LRGTGFYQKAQLEIKRADGNGALIAEEVFQKTKEKFQMY 186
            +G+   QKAQLEIK+ DGN A I+E+VF+KTK K+ +Y
Sbjct: 131 QKGSDSRQKAQLEIKKIDGNAAAISEQVFEKTKGKYILY 169


>Medtr1g081420.1 | cytidine/deoxycytidylate deaminase family protein
           | LC | chr1:36226971-36224477 | 20130731
          Length = 228

 Score =  182 bits (461), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 92/156 (58%), Positives = 112/156 (71%), Gaps = 7/156 (4%)

Query: 28  QDRDHKFLGKAVEEAYKGVDCGHGGPFGAVIVRND-EVVVSCHNMVLNHTDPTAHAEVTA 86
            DRD KF+ K+V+EAY+ V+ G G P+GA+IVRND EVVVS HNMVL + DPTAHAE+TA
Sbjct: 12  NDRDSKFIIKSVKEAYEAVESGDGYPYGALIVRNDHEVVVSTHNMVLRNKDPTAHAEITA 71

Query: 87  IREACKKLNQIELSDCEIYASCEPCPMCFGAIHLSRIKRLVYGAKXXXXXXXXXXXXXXX 146
           IREAC+ L++I L+DCE+YASCEPCPMCFGAIH S IKR+VYGA                
Sbjct: 72  IREACQTLDRISLADCELYASCEPCPMCFGAIHFSDIKRMVYGASAEVAGSIGFSNYIGT 131

Query: 147 XLRGTGFYQKAQLEIKRADGNGALIAEEVFQKTKEK 182
              GT F+   + EIK+ DG  A IAEEVF+KTK+ 
Sbjct: 132 ---GTDFH---RFEIKKIDGIAAEIAEEVFEKTKQS 161


>Medtr1g081450.1 | cytidine/deoxycytidylate deaminase family protein
           | HC | chr1:36232459-36235435 | 20130731
          Length = 222

 Score =  168 bits (426), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 89/193 (46%), Positives = 116/193 (60%), Gaps = 41/193 (21%)

Query: 27  VQDRDHKFLGKAVEEAYKGVDCGHGGPFGAVIVRNDEVVVSCHNMVLNHTDPTAHAEVTA 86
           V+DRD KF+ K+V+EAY+ V+ G G P+GA+IVRNDEV+VSCHNM L + +PTAHAE+ A
Sbjct: 29  VEDRDSKFIIKSVKEAYEAVESGDGYPYGALIVRNDEVIVSCHNMFLRNKEPTAHAEIIA 88

Query: 87  IREACKKLNQIELSDCEIYASCEPCPMCFGAIHLSRIK---------------------- 124
           IREACKKL+++ L+ CE+Y SCEPCPMCFGAIH S++K                      
Sbjct: 89  IREACKKLDKVSLAGCELYTSCEPCPMCFGAIHFSKVKASMRRLSFCLHNYTFLQSVLNY 148

Query: 125 -------------RLVYGAKXXXXXXXXXXXXXXXXLRGTGFYQKAQLEIKRADGNGALI 171
                        R+VYGA                  +GT F+   + EIK+ DG  A I
Sbjct: 149 IDITYLSYIHIKQRMVYGATAEAARSIGFSNYIG---KGTDFH---KFEIKKIDGIAAEI 202

Query: 172 AEEVFQKTKEKFQ 184
           AEEVF+KTK+K +
Sbjct: 203 AEEVFEKTKDKVK 215


>Medtr3g005755.1 | deoxycytidylate deaminase (cytidine deaminase),
           putative | LC | chr3:367590-366620 | 20130731
          Length = 309

 Score =  121 bits (303), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 76/164 (46%), Positives = 91/164 (55%), Gaps = 36/164 (21%)

Query: 20  FAGHQEAVQDRDHKFLGKAVEEAYKGVDCGHGGPFGAVIVRNDEVVVSCHNMVLNHTDPT 79
           F     AV+D+D KF+ K+         CG G PFG VIVRNDEVVVS HNMVL + DPT
Sbjct: 69  FCHKSYAVEDKDQKFITKSYA-------CGDGRPFGPVIVRNDEVVVSFHNMVLRNKDPT 121

Query: 80  AHAEVTAIREACKKLNQIELSDCEIYASCEPCPMCFGAIHLSRIKRLVYGAKXXXXXXXX 139
           AHAE+  IREAC+KL+QI L+DC IY            ++L    RLVYGAK        
Sbjct: 122 AHAEIIPIREACQKLDQIYLTDCGIY---------MLLVNL----RLVYGAKYEVAG--- 165

Query: 140 XXXXXXXXLRGTGFYQKAQLEIKRADGNGALIAEEVFQKTKEKF 183
                       GF     L IK+ DGN A IAE+VF+K K K+
Sbjct: 166 ----------AIGF---DSLMIKKIDGNAAEIAEQVFEKKKGKY 196


>Medtr1g081440.1 | cytidine/deoxycytidylate deaminase family
          protein | LC | chr1:36231786-36232067 | 20130731
          Length = 93

 Score = 86.3 bits (212), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 41/62 (66%), Positives = 49/62 (79%), Gaps = 6/62 (9%)

Query: 28 QDRDHKFLGKAVEEAYKGVDCGHGGPFGAVIVRNDEVVVSCHNMVLNHTDPTAHAEVTAI 87
          +DRD KF+ KAVEEAYKGV+CG      A+ V+NDE+VVS HNMVL + DPTAHAEVT +
Sbjct: 18 EDRDRKFIAKAVEEAYKGVECG------AITVQNDEIVVSSHNMVLRNKDPTAHAEVTVM 71

Query: 88 RE 89
          RE
Sbjct: 72 RE 73


>Medtr4g012000.4 | tRNA-specific adenosine deaminase | HC |
           chr4:3200772-3190968 | 20130731
          Length = 1055

 Score = 75.9 bits (185), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 43/100 (43%), Positives = 60/100 (60%), Gaps = 1/100 (1%)

Query: 31  DHKFLGKAVEEAYKGVDCGHGGPFGAVIVRNDEVVVSCHNMVLNHTDPTAHAEVTAIREA 90
           D  F+ +A+ EA K  D     P GAV+V++ +++    N+V    D TAHAE+  IREA
Sbjct: 855 DELFMKEALLEARKAGDTWEV-PVGAVLVQHGKIIARGCNLVEELRDSTAHAEMVCIREA 913

Query: 91  CKKLNQIELSDCEIYASCEPCPMCFGAIHLSRIKRLVYGA 130
            K LN   LS+  +Y + EPC MC GAI  +RI  +V+GA
Sbjct: 914 SKHLNSWRLSETTLYVTLEPCAMCAGAILQARIDTVVWGA 953


>Medtr4g012000.3 | tRNA-specific adenosine deaminase | HC |
           chr4:3200898-3190956 | 20130731
          Length = 1048

 Score = 75.9 bits (185), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 43/100 (43%), Positives = 60/100 (60%), Gaps = 1/100 (1%)

Query: 31  DHKFLGKAVEEAYKGVDCGHGGPFGAVIVRNDEVVVSCHNMVLNHTDPTAHAEVTAIREA 90
           D  F+ +A+ EA K  D     P GAV+V++ +++    N+V    D TAHAE+  IREA
Sbjct: 855 DELFMKEALLEARKAGDTWEV-PVGAVLVQHGKIIARGCNLVEELRDSTAHAEMVCIREA 913

Query: 91  CKKLNQIELSDCEIYASCEPCPMCFGAIHLSRIKRLVYGA 130
            K LN   LS+  +Y + EPC MC GAI  +RI  +V+GA
Sbjct: 914 SKHLNSWRLSETTLYVTLEPCAMCAGAILQARIDTVVWGA 953


>Medtr4g012000.2 | tRNA-specific adenosine deaminase | HC |
            chr4:3199290-3190971 | 20130731
          Length = 1248

 Score = 75.5 bits (184), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 43/100 (43%), Positives = 60/100 (60%), Gaps = 1/100 (1%)

Query: 31   DHKFLGKAVEEAYKGVDCGHGGPFGAVIVRNDEVVVSCHNMVLNHTDPTAHAEVTAIREA 90
            D  F+ +A+ EA K  D     P GAV+V++ +++    N+V    D TAHAE+  IREA
Sbjct: 1048 DELFMKEALLEARKAGDTWEV-PVGAVLVQHGKIIARGCNLVEELRDSTAHAEMVCIREA 1106

Query: 91   CKKLNQIELSDCEIYASCEPCPMCFGAIHLSRIKRLVYGA 130
             K LN   LS+  +Y + EPC MC GAI  +RI  +V+GA
Sbjct: 1107 SKHLNSWRLSETTLYVTLEPCAMCAGAILQARIDTVVWGA 1146


>Medtr4g012000.1 | tRNA-specific adenosine deaminase | HC |
            chr4:3199290-3191293 | 20130731
          Length = 1241

 Score = 75.5 bits (184), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 43/100 (43%), Positives = 60/100 (60%), Gaps = 1/100 (1%)

Query: 31   DHKFLGKAVEEAYKGVDCGHGGPFGAVIVRNDEVVVSCHNMVLNHTDPTAHAEVTAIREA 90
            D  F+ +A+ EA K  D     P GAV+V++ +++    N+V    D TAHAE+  IREA
Sbjct: 1048 DELFMKEALLEARKAGDTWEV-PVGAVLVQHGKIIARGCNLVEELRDSTAHAEMVCIREA 1106

Query: 91   CKKLNQIELSDCEIYASCEPCPMCFGAIHLSRIKRLVYGA 130
             K LN   LS+  +Y + EPC MC GAI  +RI  +V+GA
Sbjct: 1107 SKHLNSWRLSETTLYVTLEPCAMCAGAILQARIDTVVWGA 1146


>Medtr7g086830.1 | tRNA-specific adenosine deaminase | HC |
           chr7:33771815-33768126 | 20130731
          Length = 178

 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/86 (37%), Positives = 45/86 (52%), Gaps = 9/86 (10%)

Query: 53  PFGAVIVRNDEVVVSCHNMVLNHTDPTAHAEVTAI---REACKK--LNQIEL----SDCE 103
           P G VIV + +V+ S  N      + T HAE+ AI    E  +K  L+  E+    S+C 
Sbjct: 27  PVGCVIVEDGKVIASGRNRTTETRNATRHAEMEAIDVLLEQWQKNGLSMTEVAKKFSNCS 86

Query: 104 IYASCEPCPMCFGAIHLSRIKRLVYG 129
           +Y +CEPC MC  A+    IK + YG
Sbjct: 87  LYVTCEPCIMCASALSNLGIKEVFYG 112


>Medtr7g086830.2 | tRNA-specific adenosine deaminase | HC |
           chr7:33771802-33768158 | 20130731
          Length = 178

 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/86 (37%), Positives = 45/86 (52%), Gaps = 9/86 (10%)

Query: 53  PFGAVIVRNDEVVVSCHNMVLNHTDPTAHAEVTAI---REACKK--LNQIEL----SDCE 103
           P G VIV + +V+ S  N      + T HAE+ AI    E  +K  L+  E+    S+C 
Sbjct: 27  PVGCVIVEDGKVIASGRNRTTETRNATRHAEMEAIDVLLEQWQKNGLSMTEVAKKFSNCS 86

Query: 104 IYASCEPCPMCFGAIHLSRIKRLVYG 129
           +Y +CEPC MC  A+    IK + YG
Sbjct: 87  LYVTCEPCIMCASALSNLGIKEVFYG 112