Miyakogusa Predicted Gene

Lj4g3v2215300.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2215300.2 Non Characterized Hit- tr|I1MS36|I1MS36_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.58127 PE,85.19,0,Protein
present in Fab1, YOTB, Vac1, and EEA,Zinc finger, FYVE-type; FYVE/PHD
zinc finger,Zinc finge,CUFF.50512.2
         (479 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g124600.1 | RING/FYVE/PHD-type zinc finger protein | HC | ...   691   0.0  
Medtr2g044220.1 | RING/FYVE/PHD-type zinc finger protein | HC | ...   623   e-178
Medtr2g016870.1 | RING/FYVE/PHD-type zinc finger protein | HC | ...   380   e-105
Medtr8g023080.1 | 1-phosphatidylinositol-3-phosphate 5-kinase | ...    67   4e-11
Medtr8g023080.3 | 1-phosphatidylinositol-3-phosphate 5-kinase | ...    67   4e-11
Medtr8g023080.2 | 1-phosphatidylinositol-3-phosphate 5-kinase | ...    67   4e-11
Medtr3g114080.1 | RING/FYVE/PHD-type zinc finger protein | HC | ...    63   6e-10
Medtr4g124590.1 | 1-phosphatidylinositol-3-phosphate 5-kinase | ...    60   6e-09
Medtr4g092040.1 | FYVE zinc finger protein | HC | chr4:36532038-...    59   1e-08
Medtr4g092040.2 | FYVE zinc finger protein | HC | chr4:36532038-...    59   1e-08
Medtr4g029410.1 | regulator of chromosome condensation (RCC1) fa...    56   1e-07
Medtr1g042800.1 | chromosome condensation regulator RCC1 repeat ...    54   4e-07
Medtr7g072410.1 | regulator of chromosome condensation (RCC1) fa...    51   3e-06

>Medtr4g124600.1 | RING/FYVE/PHD-type zinc finger protein | HC |
           chr4:51599216-51595277 | 20130731
          Length = 424

 Score =  691 bits (1783), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 333/411 (81%), Positives = 369/411 (89%), Gaps = 6/411 (1%)

Query: 1   MASSNGKVAYASLSKLEKEDAHFGYDDMNSYSESTWSEPKSGAATFSNQE---KLYQFPS 57
           MASS G++AY+SLSKLEKE  HFG+D MN + +STWSEP+S   T +NQ+     YQFP 
Sbjct: 1   MASSEGRIAYSSLSKLEKEKTHFGFDAMNHHVQSTWSEPESTIGT-TNQDISYDSYQFPY 59

Query: 58  EDDDLFDGGYESEDDAYARRITPSNMPPEVNLKNVLGGICAILTGKNKAPKIAVNEQLPI 117
           E+D+LFDGGY+S ++A    I  SNMPPEVNLKNVL GI +ILTG+NKAPKI VNEQ P 
Sbjct: 60  EEDELFDGGYDSNEEARGG-IARSNMPPEVNLKNVLSGIFSILTGQNKAPKIDVNEQSPS 118

Query: 118 SNVSFFDSGNDGD-IVHASVYSPSAPPLCLPNGADYSSYKEVLEAEPPDWLPDSATTVCM 176
           SNVSF  +G +GD +++ASVY+PSAPPLCLPNGA+YSSYKEVLEAEPP+WLPDS+TT CM
Sbjct: 119 SNVSFLGAGKNGDDLLNASVYTPSAPPLCLPNGAEYSSYKEVLEAEPPEWLPDSSTTACM 178

Query: 177 QCTAPFTALTRGRHHCRFCGGIFCRNCTKGRCLLPVRFRERNPQRVCDSCYDRLDPLQGV 236
           QC +PFTALTRGRHHCRFCGGIFCR CTKGRCLLPVRFRERNPQRVCDSCYDRLDPLQGV
Sbjct: 179 QCASPFTALTRGRHHCRFCGGIFCRICTKGRCLLPVRFRERNPQRVCDSCYDRLDPLQGV 238

Query: 237 LINTISNAVQPAKHDVMDWTCARGWINLPIGLSMEHEIYKASNTLRSYCQVAQSNPERSI 296
           LINTISNAVQ AKHDVMDWTCARGW+NLPIG+SMEHEIYKASNTLR+YCQVA+SNPERSI
Sbjct: 239 LINTISNAVQAAKHDVMDWTCARGWLNLPIGISMEHEIYKASNTLRNYCQVAKSNPERSI 298

Query: 297 PLAVLKSAQGLAILTVAKAGALLSYKLGTGLVVARRSDGSWSAPSAIFSLGLGWGAQIGG 356
           PL+VLKSAQGLAILTV KAGAL+SYK+GTGLVVARR DGSWSAPSAI S+GLGWGAQIGG
Sbjct: 299 PLSVLKSAQGLAILTVVKAGALVSYKVGTGLVVARRYDGSWSAPSAICSMGLGWGAQIGG 358

Query: 357 ELMDFIIVLRDMKAVKTFCSRMHFSLGAGCSAAAGPVGRVLEADIRAGDRG 407
           ELMDFI+VL D KAVKTFCSRMHFSLGAGCSAAAGPVGRVLEAD+RAGD G
Sbjct: 359 ELMDFIVVLHDTKAVKTFCSRMHFSLGAGCSAAAGPVGRVLEADLRAGDEG 409


>Medtr2g044220.1 | RING/FYVE/PHD-type zinc finger protein | HC |
           chr2:19241750-19244486 | 20130731
          Length = 427

 Score =  623 bits (1606), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 302/405 (74%), Positives = 343/405 (84%), Gaps = 13/405 (3%)

Query: 62  LFDGGYESEDDAYARRITPSNMPPEVNLKNVLGGICAILTGKNKAPKIAVNEQLPISNVS 121
           +FDG YES DD+ +   + +N P EV  KNV+    +ILT +NK            ++VS
Sbjct: 21  IFDGCYESSDDSVSIIPSFTNKPSEVRFKNVISRAFSILTRRNKTSDT--------NDVS 72

Query: 122 FFDSGNDGDIV-HASVYSPSAPPLCLPNGADYSSYKEVLEAEPPDWLPDSATTVCMQCTA 180
           F   G DGDIV   SVY PSAPP+ +    DYS+YKEVLE EPP+WL DS+ T CMQC+A
Sbjct: 73  FLGVGKDGDIVIDPSVYMPSAPPIEI----DYSAYKEVLEVEPPEWLRDSSATACMQCSA 128

Query: 181 PFTALTRGRHHCRFCGGIFCRNCTKGRCLLPVRFRERNPQRVCDSCYDRLDPLQGVLINT 240
           PFTALTRGRHHCRFCGG+FCR CTKGRCLLPV FRERNPQRVCD+C+ +LDP+Q  LI+ 
Sbjct: 129 PFTALTRGRHHCRFCGGVFCRGCTKGRCLLPVAFRERNPQRVCDACHGKLDPVQDFLISN 188

Query: 241 ISNAVQPAKHDVMDWTCARGWINLPIGLSMEHEIYKASNTLRSYCQVAQSNPERSIPLAV 300
           ISNAVQ AKHDVMDWTCA+GW+NLPIG SME EIYK+SNTLR+YC+VA+SNPE+SIPLA+
Sbjct: 189 ISNAVQVAKHDVMDWTCAKGWLNLPIGFSMEDEIYKSSNTLRNYCKVARSNPEKSIPLAI 248

Query: 301 LKSAQGLAILTVAKAGALLSYKLGTGLVVARRSDGSWSAPSAIFSLGLGWGAQIGGELMD 360
           LK A+GLAILTV KAGA LSYKLGTGLVV+R+SDGSWSAPSAIFSLGLGWGAQIGGELMD
Sbjct: 249 LKEAKGLAILTVVKAGAFLSYKLGTGLVVSRKSDGSWSAPSAIFSLGLGWGAQIGGELMD 308

Query: 361 FIIVLRDMKAVKTFCSRMHFSLGAGCSAAAGPVGRVLEADIRAGDRGSGMCYTYSCSKGA 420
           FIIVLRD+KAV+TFCS MHFSLGAGCSAAAGP+GRVLEADIRAGDRGS MCYTYSCSKGA
Sbjct: 309 FIIVLRDIKAVRTFCSHMHFSLGAGCSAAAGPIGRVLEADIRAGDRGSCMCYTYSCSKGA 368

Query: 421 FVGVSLEGNIVATRRDANLRFYGDPYLTTSDILLGMVDRPKAAQP 465
           FVG SLEGNIVATR DAN++FYG+P LTTSDILLGMVDRP+AA+P
Sbjct: 369 FVGASLEGNIVATRMDANMQFYGNPCLTTSDILLGMVDRPEAAEP 413


>Medtr2g016870.1 | RING/FYVE/PHD-type zinc finger protein | HC |
           chr2:5324170-5317931 | 20130731
          Length = 545

 Score =  380 bits (975), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 183/314 (58%), Positives = 226/314 (71%)

Query: 150 ADYSSYKEVLEAEPPDWLPDSATTVCMQCTAPFTALTRGRHHCRFCGGIFCRNCTKGRCL 209
           A + + KE++EAEPP WL DSA   CM C   F  +   RHHCRFCGGIFC  C+KGR L
Sbjct: 215 ASFGNVKELIEAEPPKWLADSAAAACMLCGVRFHPIMCSRHHCRFCGGIFCGECSKGRSL 274

Query: 210 LPVRFRERNPQRVCDSCYDRLDPLQGVLINTISNAVQPAKHDVMDWTCARGWINLPIGLS 269
           +P +FR  +PQRVCD C  RL+ +Q  L++ +SNA Q   HD+ D +  R W+N P G +
Sbjct: 275 MPSKFRVSDPQRVCDVCCVRLESIQPYLMDHVSNASQLPTHDLTDLSTLRSWVNFPWGQT 334

Query: 270 MEHEIYKASNTLRSYCQVAQSNPERSIPLAVLKSAQGLAILTVAKAGALLSYKLGTGLVV 329
           ME+EIYKA+NT++SY Q+    PE++IP A+L+ A+GLAI+TV K G +++Y +GTG+VV
Sbjct: 335 MEYEIYKATNTIKSYNQIGLLKPEKTIPDAILRQAKGLAIITVVKVGVVVTYNIGTGIVV 394

Query: 330 ARRSDGSWSAPSAIFSLGLGWGAQIGGELMDFIIVLRDMKAVKTFCSRMHFSLGAGCSAA 389
           ARR DGSWS PSA+ + G+GWGAQ GGEL DFIIVLR  +AVKTF    H SLGAG SAA
Sbjct: 395 ARREDGSWSPPSAVSTFGVGWGAQAGGELTDFIIVLRTNEAVKTFSGNAHVSLGAGMSAA 454

Query: 390 AGPVGRVLEADIRAGDRGSGMCYTYSCSKGAFVGVSLEGNIVATRRDANLRFYGDPYLTT 449
            G +GR +EAD+RAGD G   CYTYSCSKGAFVG SLEG+IV TR   N RFYG   L  
Sbjct: 455 VGVIGRAVEADVRAGDGGYAACYTYSCSKGAFVGCSLEGSIVTTRTHENCRFYGSQSLNA 514

Query: 450 SDILLGMVDRPKAA 463
           SDILLG + RP AA
Sbjct: 515 SDILLGSLPRPPAA 528


>Medtr8g023080.1 | 1-phosphatidylinositol-3-phosphate 5-kinase | HC
           | chr8:8246072-8256088 | 20130731
          Length = 1811

 Score = 67.0 bits (162), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 34/79 (43%), Positives = 44/79 (55%), Gaps = 12/79 (15%)

Query: 166 WLPDSATTVCMQCTAPFTALTRGRHHCRFCGGIFCRNCTKGRCLLPVRFR-ERNPQ---- 220
           W+PD +  VC +C + FT   R RHHCR CG IFC  CT     +P  F  ERNP     
Sbjct: 33  WMPDHSCRVCYECDSQFTLFNR-RHHCRLCGRIFCSKCTTNS--IPAPFSGERNPWDEWE 89

Query: 221 --RVCDSCYDRLDPLQGVL 237
             RVC+ CY + +  QG++
Sbjct: 90  KIRVCNYCYKQWE--QGIV 106


>Medtr8g023080.3 | 1-phosphatidylinositol-3-phosphate 5-kinase | HC
           | chr8:8244596-8256379 | 20130731
          Length = 1819

 Score = 67.0 bits (162), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 34/79 (43%), Positives = 44/79 (55%), Gaps = 12/79 (15%)

Query: 166 WLPDSATTVCMQCTAPFTALTRGRHHCRFCGGIFCRNCTKGRCLLPVRFR-ERNPQ---- 220
           W+PD +  VC +C + FT   R RHHCR CG IFC  CT     +P  F  ERNP     
Sbjct: 41  WMPDHSCRVCYECDSQFTLFNR-RHHCRLCGRIFCSKCTTNS--IPAPFSGERNPWDEWE 97

Query: 221 --RVCDSCYDRLDPLQGVL 237
             RVC+ CY + +  QG++
Sbjct: 98  KIRVCNYCYKQWE--QGIV 114


>Medtr8g023080.2 | 1-phosphatidylinositol-3-phosphate 5-kinase | HC
           | chr8:8244583-8256436 | 20130731
          Length = 1819

 Score = 67.0 bits (162), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 34/79 (43%), Positives = 44/79 (55%), Gaps = 12/79 (15%)

Query: 166 WLPDSATTVCMQCTAPFTALTRGRHHCRFCGGIFCRNCTKGRCLLPVRFR-ERNPQ---- 220
           W+PD +  VC +C + FT   R RHHCR CG IFC  CT     +P  F  ERNP     
Sbjct: 41  WMPDHSCRVCYECDSQFTLFNR-RHHCRLCGRIFCSKCTTNS--IPAPFSGERNPWDEWE 97

Query: 221 --RVCDSCYDRLDPLQGVL 237
             RVC+ CY + +  QG++
Sbjct: 98  KIRVCNYCYKQWE--QGIV 114


>Medtr3g114080.1 | RING/FYVE/PHD-type zinc finger protein | HC |
           chr3:53260463-53266029 | 20130731
          Length = 549

 Score = 62.8 bits (151), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 29/61 (47%), Positives = 32/61 (52%), Gaps = 2/61 (3%)

Query: 166 WLPDSATTVCMQCTAPFTALTRGRHHCRFCGGIFCRNCTKGRCLLPVRFRERNPQRVCDS 225
           W+PD A + C  C   F A  R +HHCR CG IFC  CT GR  L        P RVCD 
Sbjct: 401 WVPDEAVSKCTACGTDFGAFIR-KHHCRNCGDIFCDKCTHGRIALTAE-ENAQPVRVCDR 458

Query: 226 C 226
           C
Sbjct: 459 C 459


>Medtr4g124590.1 | 1-phosphatidylinositol-3-phosphate 5-kinase | HC
           | chr4:51591191-51580865 | 20130731
          Length = 1801

 Score = 59.7 bits (143), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 30/83 (36%), Positives = 42/83 (50%), Gaps = 15/83 (18%)

Query: 161 AEPPD-----WLPDSATTVCMQCTAPFTALTRGRHHCRFCGGIFCRNCTKGRCLLPVRFR 215
            EPP+     W+PD +  +C +C + FT   R RHHCR CG +FC  CT     +P   R
Sbjct: 23  VEPPNVSRDFWMPDQSCPLCYECDSQFTVFNR-RHHCRICGRVFCAKCTAN--FVPSSPR 79

Query: 216 ERN-------PQRVCDSCYDRLD 231
           E N         RVC+ C+ + +
Sbjct: 80  EPNIGREDWERIRVCNYCFKQWE 102


>Medtr4g092040.1 | FYVE zinc finger protein | HC |
           chr4:36532038-36526309 | 20130731
          Length = 1230

 Score = 58.5 bits (140), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 25/62 (40%), Positives = 41/62 (66%), Gaps = 5/62 (8%)

Query: 165 DWLPDSATTVCMQCTAPFTALTRGRHHCRFCGGIFCRNCTKGRCLLPVRFRERNPQRVCD 224
           +W+ D++   C  C+A FT + R +HHCR CGG+FC +CT+ R  + +R +  +P R+C+
Sbjct: 17  NWVVDASN--CQGCSAQFTFINR-KHHCRRCGGLFCGSCTQQR--MALRGQGDSPVRICE 71

Query: 225 SC 226
            C
Sbjct: 72  PC 73


>Medtr4g092040.2 | FYVE zinc finger protein | HC |
           chr4:36532038-36526140 | 20130731
          Length = 1230

 Score = 58.5 bits (140), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 25/62 (40%), Positives = 41/62 (66%), Gaps = 5/62 (8%)

Query: 165 DWLPDSATTVCMQCTAPFTALTRGRHHCRFCGGIFCRNCTKGRCLLPVRFRERNPQRVCD 224
           +W+ D++   C  C+A FT + R +HHCR CGG+FC +CT+ R  + +R +  +P R+C+
Sbjct: 17  NWVVDASN--CQGCSAQFTFINR-KHHCRRCGGLFCGSCTQQR--MALRGQGDSPVRICE 71

Query: 225 SC 226
            C
Sbjct: 72  PC 73


>Medtr4g029410.1 | regulator of chromosome condensation (RCC1)
           family protein, putative | HC | chr4:10165501-10157053 |
           20130731
          Length = 1045

 Score = 55.8 bits (133), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 25/59 (42%), Positives = 34/59 (57%), Gaps = 2/59 (3%)

Query: 173 TVCMQCTAPFTALTRGRHHCRFCGGIFCRNCTKGRCLLPVRFRERN-PQRVCDSCYDRL 230
           +VC  C  PF  LTR RH+C  CG +FC NC+  + +        + P RVCD+CY +L
Sbjct: 418 SVCFGCRQPF-GLTRIRHNCNNCGLVFCHNCSSKKAIKAAMAPTLDKPHRVCDTCYTKL 475


>Medtr1g042800.1 | chromosome condensation regulator RCC1 repeat
           protein | HC | chr1:16011888-16018401 | 20130731
          Length = 1076

 Score = 53.5 bits (127), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 24/66 (36%), Positives = 35/66 (53%), Gaps = 2/66 (3%)

Query: 166 WLPDSATTVCMQCTAPFTALTRGRHHCRFCGGIFCRNCTKGRCL-LPVRFRERNPQRVCD 224
           W+  +  +VC  C  PF   TR RH+C  CG ++C  C+  + L   +      P RVCD
Sbjct: 607 WVSGNDQSVCSGCRQPF-GFTRKRHNCYHCGLVYCHPCSSKKALKAALAPTPSKPHRVCD 665

Query: 225 SCYDRL 230
           +CY +L
Sbjct: 666 ACYAKL 671


>Medtr7g072410.1 | regulator of chromosome condensation (RCC1)
           family protein | HC | chr7:26894031-26888474 | 20130731
          Length = 1108

 Score = 50.8 bits (120), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 26/84 (30%), Positives = 39/84 (46%), Gaps = 8/84 (9%)

Query: 166 WLPDSATTVCMQCTAPFTALTRGRHHCRFCGGIFCRNCTKGR----CLLPVRFRERNPQR 221
           W+     + C  C  PF   TR RH+C  CG + C  C+  +     L P   +   P R
Sbjct: 609 WVSGVDQSTCTGCRQPF-GFTRKRHNCYNCGLVHCHGCSSRKVMKAALAPTPGK---PHR 664

Query: 222 VCDSCYDRLDPLQGVLINTISNAV 245
           VCDSCY +L  ++    + ++  V
Sbjct: 665 VCDSCYTKLKAVEANAASNLNRKV 688