Miyakogusa Predicted Gene
- Lj4g3v2140320.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v2140320.1 Non Characterized Hit- tr|I1GXU4|I1GXU4_BRADI
Uncharacterized protein OS=Brachypodium distachyon
GN=,41.72,1e-18,zinc finger binding to DNA consensus sequenc,Zinc
finger, GATA-type; GATA,Zinc finger, GATA-type; SU,CUFF.50368.1
(325 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr4g126350.1 | GATA type zinc finger transcription factor fam... 273 2e-73
Medtr2g038720.1 | GATA type zinc finger transcription factor fam... 184 1e-46
Medtr1g016170.1 | GATA zinc finger protein | HC | chr1:4240718-4... 86 4e-17
Medtr4g121110.1 | GATA type zinc finger transcription factor fam... 68 9e-12
Medtr7g112330.1 | GATA type zinc finger transcription factor fam... 67 2e-11
Medtr5g020230.1 | GATA type zinc finger transcription factor fam... 67 2e-11
Medtr8g077510.1 | GATA type zinc finger transcription factor fam... 65 8e-11
Medtr1g116010.1 | GATA type zinc finger transcription factor fam... 60 3e-09
Medtr1g094930.1 | GATA type zinc finger transcription factor fam... 59 9e-09
Medtr2g094600.1 | GATA type zinc finger transcription factor fam... 59 9e-09
Medtr1g094930.2 | GATA type zinc finger transcription factor fam... 58 1e-08
Medtr4g058910.1 | GATA type zinc finger transcription factor fam... 58 1e-08
Medtr1g006650.1 | GATA transcription factor-like protein | HC | ... 56 5e-08
Medtr3g109760.1 | GATA transcription factor, putative | HC | chr... 56 5e-08
Medtr5g021340.1 | GATA type zinc finger transcription factor fam... 56 6e-08
Medtr8g013950.1 | GATA transcription factor-like protein | HC | ... 55 7e-08
Medtr8g076340.1 | GATA type zinc finger transcription factor fam... 55 1e-07
Medtr5g007600.1 | GATA type zinc finger transcription factor fam... 55 1e-07
Medtr4g071590.1 | GATA type zinc finger transcription factor fam... 54 2e-07
Medtr4g471590.1 | GATA type zinc finger transcription factor fam... 54 2e-07
Medtr4g471590.2 | GATA type zinc finger transcription factor fam... 54 2e-07
Medtr6g032830.1 | GATA type zinc finger transcription factor fam... 54 3e-07
Medtr3g117380.1 | GATA type zinc finger transcription factor fam... 53 5e-07
Medtr7g085410.1 | GATA type zinc finger transcription factor fam... 52 8e-07
Medtr1g016200.1 | GATA type zinc finger transcription factor fam... 52 8e-07
Medtr1g046680.1 | GATA type zinc finger transcription factor fam... 52 1e-06
Medtr1g046680.2 | GATA type zinc finger transcription factor fam... 52 1e-06
>Medtr4g126350.1 | GATA type zinc finger transcription factor family
protein | HC | chr4:52564744-52566048 | 20130731
Length = 327
Score = 273 bits (698), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 172/333 (51%), Positives = 209/333 (62%), Gaps = 19/333 (5%)
Query: 3 PAHRPSVSPSLMPLDLNQDDQNHDELFSPNHLVAXXXXXXXX--YPILFNPPDQDQEGSY 60
P +R S+S S+MPLDLNQD QNHD + + YP LFN DQ Q+ SY
Sbjct: 4 PPYRHSISSSVMPLDLNQD-QNHDLSSPNSSSSSSSSFSSLSPSYPTLFNSQDQVQKPSY 62
Query: 61 CWEPKHSPNEEEDEKIIIPSSGSWDNSAAEKH-GSSSKHKLRV-WKREERDGE--NLEEA 116
+ H P+++E EKI IPSSGSW++S AE H +KHKL + WK+E+ E N +EA
Sbjct: 63 YCQTNHLPHDQEVEKINIPSSGSWNSSTAENHENYKTKHKLTIRWKKEQISDEMNNNQEA 122
Query: 117 HEDGSLSVKWMSSKMRIMRKMIVPDQRGTSYAVAENTMQRFEDQKLPLSPVGTDXXXXXX 176
+DG+ SVKWMSSKMRIM+KM+V DQ G+S + + +FEDQK PLSP GTD
Sbjct: 123 DQDGT-SVKWMSSKMRIMKKMMVSDQTGSSNLTSNSKQIKFEDQKQPLSPQGTDNSSSNN 181
Query: 177 XXXXXXTVRVCADCNTTKTPLWRSGPRGPKSLCNACGIRQRKXXXXXXXXXXXXSGDGTI 236
T+RVC+DCNTTKTPLWRSGPRGPKSLCNACGIRQRK S +GT
Sbjct: 182 YS----TIRVCSDCNTTKTPLWRSGPRGPKSLCNACGIRQRK--ARRALAAAAASANGTT 235
Query: 237 LVTAESSXXXXXXXXXXXXXXXXESAPPVAQIKKKHR--ANKPS-QSKKKF-GFEDLTLS 292
+ +S E +KKKH+ A PS QS+K+F FEDL LS
Sbjct: 236 IADQTASVKRKKLQKKKENKSKIEFDCSTVHMKKKHKLEAKPPSHQSRKEFITFEDLKLS 295
Query: 293 LSKNLASLQQVFPQDEKEAAILLMALSYGLVHG 325
LS+NL +QQVFPQDE+EAAILLMALSYGLVHG
Sbjct: 296 LSENLG-VQQVFPQDEREAAILLMALSYGLVHG 327
>Medtr2g038720.1 | GATA type zinc finger transcription factor family
protein | HC | chr2:16955533-16953838 | 20130731
Length = 297
Score = 184 bits (467), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 142/328 (43%), Positives = 172/328 (52%), Gaps = 40/328 (12%)
Query: 1 MIPAHRPSVSPSLMPL-DLNQDDQNHDELFSPNHLVAXXXXXXXXYPILFNPPDQDQEGS 59
MIP +R S S MP DLN +D NH LF+ N A Y ILFN +QDQ S
Sbjct: 1 MIPTYRYSASSPPMPFFDLNNEDHNH-HLFTTNQQ-ATSSSSSLSYSILFNQ-NQDQTNS 57
Query: 60 YCWEPKHSPNEEEDEKIIIPSSGSWDNSAAEKHGSSSKHKLRVWKREERDGENLEEAHED 119
Y WE H ++ + K +PSS SWD+ EK + WK+EE D EN ++
Sbjct: 58 YSWESNHILSDGVEVKNFVPSSESWDHQEVEKDA-------KDWKKEE-DNENF---RDE 106
Query: 120 GSLSVKWMSSKMRIMRKMIVPDQRGTSYAVAENTMQRFEDQKLPLSP--VGTDXXXXXXX 177
G +S+KWM SK R++++M+ DQR + Q FE Q LSP VGT+
Sbjct: 107 GRISMKWMPSKKRMIKRMM-EDQRASE--------QEFEKQIKQLSPNLVGTEDSSNNNF 157
Query: 178 XXXXXTVRVCADCNTTKTPLWRSGPRGPKSLCNACGIRQRKXXXXXXXXXXXXSGDGTIL 237
TVRVC DC+TTKTPLWRSGP GPKSLCNACGIRQRK + +G L
Sbjct: 158 SNNS-TVRVCTDCHTTKTPLWRSGPTGPKSLCNACGIRQRK-----ARRALAAAANGETL 211
Query: 238 VTAESSXXXXXXXXXXXXXXXXESAPPVAQIKKKHRANKPSQSKKKFGFEDLTLSLSKNL 297
V AE + AQ+ K+ K K FEDL S S NL
Sbjct: 212 VVAEKPYVKGKKLQIKRKRSKTDQC---AQLLKR----KGKSENKCNNFEDLITSWSNNL 264
Query: 298 ASLQQVFPQDEKEAAILLMALSYGLVHG 325
AS QVFPQD KEAAILLMALS GL++G
Sbjct: 265 AS-HQVFPQDVKEAAILLMALSSGLLNG 291
>Medtr1g016170.1 | GATA zinc finger protein | HC |
chr1:4240718-4238422 | 20130731
Length = 305
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 51/114 (44%), Positives = 62/114 (54%), Gaps = 19/114 (16%)
Query: 123 SVKWMSSKMRIMRKMI--------VPDQRGTSYAVAENTMQRFEDQKLPLSP--VGTD-- 170
S KW+SSKMR+M KMI P R + ++A T + + +SP GT
Sbjct: 108 SEKWISSKMRLMNKMINTTATVATTPIMRPNN-SIAATTDKAIKTTTPMMSPSNFGTSPR 166
Query: 171 ------XXXXXXXXXXXXTVRVCADCNTTKTPLWRSGPRGPKSLCNACGIRQRK 218
TVRVC+DC+T+ TPLWRSGP GPKSLCNACGIRQRK
Sbjct: 167 NQNVRYSQTSPSSNSGNNTVRVCSDCSTSHTPLWRSGPMGPKSLCNACGIRQRK 220
>Medtr4g121110.1 | GATA type zinc finger transcription factor family
protein | HC | chr4:50150055-50148909 | 20130731
Length = 144
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 27/34 (79%), Positives = 29/34 (85%)
Query: 185 RVCADCNTTKTPLWRSGPRGPKSLCNACGIRQRK 218
+ CADC T+KTPLWR GP GPKSLCNACGIR RK
Sbjct: 30 KTCADCGTSKTPLWRGGPAGPKSLCNACGIRSRK 63
>Medtr7g112330.1 | GATA type zinc finger transcription factor family
protein | HC | chr7:46145422-46144111 | 20130731
Length = 129
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 27/34 (79%), Positives = 29/34 (85%)
Query: 185 RVCADCNTTKTPLWRSGPRGPKSLCNACGIRQRK 218
+ CADC TTKTPLWR GP GPK+LCNACGIR RK
Sbjct: 22 KFCADCKTTKTPLWRGGPNGPKTLCNACGIRYRK 55
>Medtr5g020230.1 | GATA type zinc finger transcription factor family
protein | HC | chr5:7722973-7724086 | 20130731
Length = 235
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 27/35 (77%), Positives = 31/35 (88%)
Query: 184 VRVCADCNTTKTPLWRSGPRGPKSLCNACGIRQRK 218
R CA+C+TT TPLWR+GPRGPKSLCNACGIR +K
Sbjct: 121 ARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKK 155
>Medtr8g077510.1 | GATA type zinc finger transcription factor family
protein | HC | chr8:32956780-32955421 | 20130731
Length = 238
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 26/35 (74%), Positives = 30/35 (85%)
Query: 184 VRVCADCNTTKTPLWRSGPRGPKSLCNACGIRQRK 218
R CA C++T TPLWR+GPRGPKSLCNACGIR +K
Sbjct: 124 ARRCASCDSTSTPLWRNGPRGPKSLCNACGIRYKK 158
>Medtr1g116010.1 | GATA type zinc finger transcription factor family
protein | LC | chr1:52421000-52422477 | 20130731
Length = 246
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 22/34 (64%), Positives = 26/34 (76%)
Query: 184 VRVCADCNTTKTPLWRSGPRGPKSLCNACGIRQR 217
VR C C TKTP WR+GP GPK+LCNACG+R +
Sbjct: 163 VRQCTHCEATKTPQWRTGPEGPKTLCNACGVRYK 196
>Medtr1g094930.1 | GATA type zinc finger transcription factor family
protein | HC | chr1:42711159-42715182 | 20130731
Length = 331
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 22/34 (64%), Positives = 26/34 (76%)
Query: 184 VRVCADCNTTKTPLWRSGPRGPKSLCNACGIRQR 217
VR C C TKTP WR+GP GPK+LCNACG+R +
Sbjct: 241 VRKCMHCEITKTPQWRAGPMGPKTLCNACGVRYK 274
>Medtr2g094600.1 | GATA type zinc finger transcription factor family
protein | HC | chr2:40382738-40376743 | 20130731
Length = 312
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 46/96 (47%), Gaps = 13/96 (13%)
Query: 122 LSVKWMSSKMRIMRKMIVPDQRGTSYAVAENTMQRFEDQKLPLSPVGTDXXXXXXXXXXX 181
S+ +++S + +K+ + +E+ + R + QK LS D
Sbjct: 166 FSISFIASLQALHKKI----------SASESDLNRVKKQKRMLS---GDIETKKSSSQES 212
Query: 182 XTVRVCADCNTTKTPLWRSGPRGPKSLCNACGIRQR 217
R C C T+TP WR GP GPK+LCNACG+R R
Sbjct: 213 VVQRKCTHCEVTETPQWREGPNGPKTLCNACGVRYR 248
>Medtr1g094930.2 | GATA type zinc finger transcription factor family
protein | HC | chr1:42711402-42715086 | 20130731
Length = 236
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 22/34 (64%), Positives = 26/34 (76%)
Query: 184 VRVCADCNTTKTPLWRSGPRGPKSLCNACGIRQR 217
VR C C TKTP WR+GP GPK+LCNACG+R +
Sbjct: 146 VRKCMHCEITKTPQWRAGPMGPKTLCNACGVRYK 179
>Medtr4g058910.1 | GATA type zinc finger transcription factor family
protein | HC | chr4:21699022-21702492 | 20130731
Length = 402
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 21/33 (63%), Positives = 25/33 (75%)
Query: 185 RVCADCNTTKTPLWRSGPRGPKSLCNACGIRQR 217
R C C T+TP WR GP+GPK+LCNACG+R R
Sbjct: 314 RKCTHCEVTETPQWREGPKGPKTLCNACGVRYR 346
>Medtr1g006650.1 | GATA transcription factor-like protein | HC |
chr1:120398-121915 | 20130731
Length = 344
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 21/33 (63%), Positives = 25/33 (75%)
Query: 185 RVCADCNTTKTPLWRSGPRGPKSLCNACGIRQR 217
R C C T KTP WR+GP GPK+LCNACG+R +
Sbjct: 234 RRCLHCMTDKTPQWRTGPNGPKTLCNACGVRYK 266
>Medtr3g109760.1 | GATA transcription factor, putative | HC |
chr3:51334611-51332152 | 20130731
Length = 318
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 21/33 (63%), Positives = 25/33 (75%)
Query: 185 RVCADCNTTKTPLWRSGPRGPKSLCNACGIRQR 217
R C C T KTP WR+GP GPK+LCNACG+R +
Sbjct: 207 RKCLHCATDKTPQWRTGPLGPKTLCNACGVRYK 239
>Medtr5g021340.1 | GATA type zinc finger transcription factor family
protein | HC | chr5:8235968-8237757 | 20130731
Length = 390
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 21/31 (67%), Positives = 24/31 (77%)
Query: 185 RVCADCNTTKTPLWRSGPRGPKSLCNACGIR 215
R C+ C TKTP WRSGP G K+LCNACG+R
Sbjct: 300 RRCSHCGVTKTPQWRSGPLGAKTLCNACGVR 330
>Medtr8g013950.1 | GATA transcription factor-like protein | HC |
chr8:4316084-4314496 | 20130731
Length = 342
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 21/31 (67%), Positives = 24/31 (77%)
Query: 185 RVCADCNTTKTPLWRSGPRGPKSLCNACGIR 215
R C C T KTP WR+GP GPK+LCNACG+R
Sbjct: 226 RKCLHCGTDKTPQWRTGPMGPKTLCNACGVR 256
>Medtr8g076340.1 | GATA type zinc finger transcription factor family
protein | HC | chr8:32335878-32334397 | 20130731
Length = 291
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 25/33 (75%)
Query: 185 RVCADCNTTKTPLWRSGPRGPKSLCNACGIRQR 217
R C+ C KTP WR+GP GPK+LCNACG+R +
Sbjct: 218 RRCSHCGVQKTPQWRTGPGGPKTLCNACGVRYK 250
>Medtr5g007600.1 | GATA type zinc finger transcription factor family
protein | LC | chr5:1423316-1424761 | 20130731
Length = 331
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 21/33 (63%), Positives = 24/33 (72%)
Query: 185 RVCADCNTTKTPLWRSGPRGPKSLCNACGIRQR 217
R C C TPLWR+GP GPK+LCNACG+R R
Sbjct: 157 RQCHHCGADNTPLWRTGPGGPKTLCNACGVRYR 189
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 22/33 (66%)
Query: 185 RVCADCNTTKTPLWRSGPRGPKSLCNACGIRQR 217
R C C TP WR GP GPK+LCNACG+R R
Sbjct: 259 RKCHHCGADNTPQWRVGPDGPKTLCNACGVRYR 291
>Medtr4g071590.1 | GATA type zinc finger transcription factor family
protein | HC | chr4:27083364-27084692 | 20130731
Length = 296
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 20/31 (64%), Positives = 25/31 (80%)
Query: 185 RVCADCNTTKTPLWRSGPRGPKSLCNACGIR 215
R C+ C+ KTP WR+GP GPK+LCNACG+R
Sbjct: 211 RRCSHCHVQKTPQWRAGPLGPKTLCNACGVR 241
>Medtr4g471590.1 | GATA type zinc finger transcription factor family
protein | HC | chr4:27062112-27064230 | 20130731
Length = 296
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 20/31 (64%), Positives = 25/31 (80%)
Query: 185 RVCADCNTTKTPLWRSGPRGPKSLCNACGIR 215
R C+ C+ KTP WR+GP GPK+LCNACG+R
Sbjct: 211 RRCSHCHVQKTPQWRAGPLGPKTLCNACGVR 241
>Medtr4g471590.2 | GATA type zinc finger transcription factor family
protein | HC | chr4:27062164-27064215 | 20130731
Length = 296
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 20/31 (64%), Positives = 25/31 (80%)
Query: 185 RVCADCNTTKTPLWRSGPRGPKSLCNACGIR 215
R C+ C+ KTP WR+GP GPK+LCNACG+R
Sbjct: 211 RRCSHCHVQKTPQWRAGPLGPKTLCNACGVR 241
>Medtr6g032830.1 | GATA type zinc finger transcription factor family
protein | HC | chr6:10247553-10249306 | 20130731
Length = 261
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 25/33 (75%)
Query: 185 RVCADCNTTKTPLWRSGPRGPKSLCNACGIRQR 217
R C C + +TP WR+GP GPK+LCNACG+R +
Sbjct: 192 RRCTHCLSQRTPQWRAGPLGPKTLCNACGVRYK 224
>Medtr3g117380.1 | GATA type zinc finger transcription factor family
protein | HC | chr3:54929820-54931483 | 20130731
Length = 315
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 24/33 (72%)
Query: 185 RVCADCNTTKTPLWRSGPRGPKSLCNACGIRQR 217
R C+ C KTP WR+GP G K+LCNACG+R +
Sbjct: 229 RRCSHCQVQKTPQWRTGPMGAKTLCNACGVRYK 261
>Medtr7g085410.1 | GATA type zinc finger transcription factor family
protein | HC | chr7:33076091-33074852 | 20130731
Length = 264
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 25/34 (73%)
Query: 184 VRVCADCNTTKTPLWRSGPRGPKSLCNACGIRQR 217
R C C + +TP WR+GP GPK+LCNACG+R +
Sbjct: 187 TRRCTHCLSQRTPQWRAGPLGPKTLCNACGVRYK 220
>Medtr1g016200.1 | GATA type zinc finger transcription factor family
protein | LC | chr1:4253229-4252785 | 20130731
Length = 104
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 38/82 (46%)
Query: 137 MIVPDQRGTSYAVAENTMQRFEDQKLPLSPVGTDXXXXXXXXXXXXTVRVCADCNTTKTP 196
+++P +R A A + + L P T+ VC DC+T TP
Sbjct: 12 LVLPKRRKQMLASAAKKKKIKTTTEYELYPSFKPKYPRMRVSNIWLTITVCFDCDTNTTP 71
Query: 197 LWRSGPRGPKSLCNACGIRQRK 218
LW S P G K LCNAC +R+R+
Sbjct: 72 LWSSDPTGSKWLCNACRLRRRR 93
>Medtr1g046680.1 | GATA type zinc finger transcription factor family
protein | HC | chr1:17602830-17601607 | 20130731
Length = 244
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 23/33 (69%)
Query: 185 RVCADCNTTKTPLWRSGPRGPKSLCNACGIRQR 217
R C C TP WR+GP GPK+LCNACG+R +
Sbjct: 172 RKCHHCGVDDTPQWRAGPNGPKTLCNACGVRYK 204
>Medtr1g046680.2 | GATA type zinc finger transcription factor family
protein | HC | chr1:17602830-17601607 | 20130731
Length = 244
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 23/33 (69%)
Query: 185 RVCADCNTTKTPLWRSGPRGPKSLCNACGIRQR 217
R C C TP WR+GP GPK+LCNACG+R +
Sbjct: 172 RKCHHCGVDDTPQWRAGPNGPKTLCNACGVRYK 204