Miyakogusa Predicted Gene

Lj4g3v2121660.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2121660.1 tr|A9SIR8|A9SIR8_PHYPA Predicted protein
(Fragment) OS=Physcomitrella patens subsp. patens
GN=PHYPAD,56.47,8e-17,MRP-S33,Ribosomal protein S27/S33,
mitochondrial; seg,NULL,NODE_69823_length_611_cov_83.433716.path2.1
         (94 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g031320.1 | mitochondral 37S ribosomal S27-like protein | ...   131   1e-31

>Medtr8g031320.1 | mitochondral 37S ribosomal S27-like protein | HC
           | chr8:11732963-11736549 | 20130731
          Length = 102

 Score =  131 bits (329), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 63/94 (67%), Positives = 71/94 (75%)

Query: 1   MLTAAITGGVTEARASIFGHQLNLTGKKSPHKVLRMKLFGEKVAQWYPHDIKKDDPLVMA 60
           MLT+AI GG+T ARA+IFGHQLN +GKKS HK+LRMK+FGEKVAQWYPHDI +DDP VMA
Sbjct: 9   MLTSAINGGLTSARATIFGHQLNPSGKKSAHKILRMKMFGEKVAQWYPHDINEDDPNVMA 68

Query: 61  REQQERLSKLEMLXXXXXXXXXXXXXXXAAKRNK 94
           R+QQERLSKLEML               A K NK
Sbjct: 69  RQQQERLSKLEMLKRRGKGPPKKGQGKRAKKSNK 102