Miyakogusa Predicted Gene
- Lj4g3v1969840.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v1969840.2 Non Characterized Hit- tr|B9SWT7|B9SWT7_RICCO
Putative uncharacterized protein OS=Ricinus communis
G,30.38,4e-18,FAMILY NOT NAMED,NULL; seg,NULL,CUFF.49984.2
(271 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr4g116290.1 | transmembrane protein, putative | LC | chr4:48... 244 4e-65
Medtr2g450550.2 | transmembrane protein, putative | HC | chr2:22... 224 6e-59
Medtr2g450550.1 | transmembrane protein, putative | HC | chr2:22... 224 6e-59
Medtr3g106510.1 | transmembrane protein, putative | HC | chr3:49... 142 3e-34
Medtr1g108460.2 | transmembrane protein, putative | HC | chr1:49... 123 2e-28
Medtr1g108460.1 | transmembrane protein, putative | HC | chr1:49... 123 2e-28
Medtr2g450550.3 | transmembrane protein, putative | HC | chr2:22... 98 1e-20
Medtr2g099140.1 | transmembrane protein, putative | HC | chr2:42... 62 8e-10
Medtr2g099140.2 | transmembrane protein, putative | HC | chr2:42... 55 5e-08
>Medtr4g116290.1 | transmembrane protein, putative | LC |
chr4:48124806-48121219 | 20130731
Length = 496
Score = 244 bits (624), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 118/227 (51%), Positives = 154/227 (67%), Gaps = 5/227 (2%)
Query: 28 LQDGVEIAAVKQHDQVLPWL--RSAAEDAASPAVNSTTLVLAQERTRRKDFFHHFRRYNG 85
DGV+ KQ D+ L W+ RS + + T VLAQERT RKD F+HF+RY G
Sbjct: 5 FSDGVKFIVDKQVDEELSWMAWRSLVVEGVQ---ENKTFVLAQERTLRKDVFNHFKRYTG 61
Query: 86 GWNITNNNYITSVLSTAIPFLAVAVAWFVIFGVILSVICACYFCCPGEPNGYSKLGYASS 145
GWNI+N YI+SVLSTA+PF VA W V+FG++L +IC CY CCP +P+G+S+L ++
Sbjct: 62 GWNISNPEYISSVLSTAVPFFVVAATWLVVFGLVLHIICVCYCCCPRDPHGFSQLVCYAT 121
Query: 146 LIILILCTVAAIAGCIVLYISQGKFDGTTSNTLDYVVSQAEFTAENLRNVSRYFDSAEQI 205
I LILCT+ AI GC+VLY S+ +F GTTSNT+ Y+VSQAEFT ENL+NV+ Y DSA+ +
Sbjct: 122 FIFLILCTIVAIGGCVVLYTSEQQFHGTTSNTMKYIVSQAEFTIENLKNVTNYLDSAKMM 181
Query: 206 VIGVGLSPAVENDIDNFKKKISTATDYLSKKTRDPSKMLPRAIDAMR 252
I GL V+ +ID+ KKKI +S KT + S+ML AI MR
Sbjct: 182 AIEFGLPDDVDEEIDSVKKKIIDVAADISIKTHNNSQMLHNAIHGMR 228
>Medtr2g450550.2 | transmembrane protein, putative | HC |
chr2:22446314-22450936 | 20130731
Length = 470
Score = 224 bits (572), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 124/228 (54%), Positives = 159/228 (69%), Gaps = 6/228 (2%)
Query: 28 LQDGVEIAAVKQHDQVLPW--LRSAAEDAASPAVNSTTLVLAQERTRRKDFFHHFRRYNG 85
+ DGVE+ + ++VL W RS EDA P + +L+LAQ+RT RKD HF RYNG
Sbjct: 27 IPDGVEVDGERNPNEVLQWKTRRSMEEDAVLP---NASLILAQKRTTRKDPLDHFNRYNG 83
Query: 86 GWNITNNNYITSVLSTAIPFLAVAVAWFVIFGVILSVICACYFCCPGEPNGYSKLGYASS 145
GWNI++ +Y+ SV+ TA+PF VA WFVIFG+ LS IC CY CCP EP GYS++ YA S
Sbjct: 84 GWNISDEHYLASVVFTAVPFFVVAAVWFVIFGLTLSFICLCYCCCPKEPYGYSRVAYALS 143
Query: 146 LIILILCTVAAIAGCIVLYISQGKFDGTTSNTLDYVVSQAEFTAENLRNVSRYFDSAEQI 205
LI+LIL T+ AIAGCIVLY +QGKF G+T+ TL YVVSQA+FTAENLRNVS Y D+A+ I
Sbjct: 144 LILLILFTLLAIAGCIVLYTAQGKFHGSTTTTLKYVVSQADFTAENLRNVSDYLDAAKNI 203
Query: 206 -VIGVGLSPAVENDIDNFKKKISTATDYLSKKTRDPSKMLPRAIDAMR 252
V V L V+ +ID K KI+++ LS KT + S+ + +D MR
Sbjct: 204 GVDAVFLPSDVQTNIDTIKTKINSSAVELSTKTHENSEQINDGLDKMR 251
>Medtr2g450550.1 | transmembrane protein, putative | HC |
chr2:22446274-22452477 | 20130731
Length = 528
Score = 224 bits (571), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 124/228 (54%), Positives = 159/228 (69%), Gaps = 6/228 (2%)
Query: 28 LQDGVEIAAVKQHDQVLPW--LRSAAEDAASPAVNSTTLVLAQERTRRKDFFHHFRRYNG 85
+ DGVE+ + ++VL W RS EDA P + +L+LAQ+RT RKD HF RYNG
Sbjct: 27 IPDGVEVDGERNPNEVLQWKTRRSMEEDAVLP---NASLILAQKRTTRKDPLDHFNRYNG 83
Query: 86 GWNITNNNYITSVLSTAIPFLAVAVAWFVIFGVILSVICACYFCCPGEPNGYSKLGYASS 145
GWNI++ +Y+ SV+ TA+PF VA WFVIFG+ LS IC CY CCP EP GYS++ YA S
Sbjct: 84 GWNISDEHYLASVVFTAVPFFVVAAVWFVIFGLTLSFICLCYCCCPKEPYGYSRVAYALS 143
Query: 146 LIILILCTVAAIAGCIVLYISQGKFDGTTSNTLDYVVSQAEFTAENLRNVSRYFDSAEQI 205
LI+LIL T+ AIAGCIVLY +QGKF G+T+ TL YVVSQA+FTAENLRNVS Y D+A+ I
Sbjct: 144 LILLILFTLLAIAGCIVLYTAQGKFHGSTTTTLKYVVSQADFTAENLRNVSDYLDAAKNI 203
Query: 206 -VIGVGLSPAVENDIDNFKKKISTATDYLSKKTRDPSKMLPRAIDAMR 252
V V L V+ +ID K KI+++ LS KT + S+ + +D MR
Sbjct: 204 GVDAVFLPSDVQTNIDTIKTKINSSAVELSTKTHENSEQINDGLDKMR 251
>Medtr3g106510.1 | transmembrane protein, putative | HC |
chr3:49224097-49228278 | 20130731
Length = 575
Score = 142 bits (358), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 87/200 (43%), Positives = 118/200 (59%), Gaps = 2/200 (1%)
Query: 54 AASPAVNSTTLVLAQERTRRKDFFHHFRRYNGGWNITNNNYITSVLSTAIPFLAVAVAWF 113
AA+P NS L LA ERTRRKD F +Y GWNI++++Y S TA+P ++A WF
Sbjct: 53 AAAPYENSP-LPLAAERTRRKDPLDGFNKYTSGWNISDHHYWASAAYTAVPVFSIAAVWF 111
Query: 114 VIFGVILSVICACYFCCPGEPNGYSKLGYASSLIILILCTVAAIAGCIVLYISQGKFDGT 173
+ FG L ++ CYFC E GYS YA SLI+LIL T + GC VLYI QG F +
Sbjct: 112 LGFGFCLLLLIVCYFCRKTESYGYSSTYYALSLILLILFTFITLIGCAVLYIGQGSFHRS 171
Query: 174 TSNTLDYVVSQAEFTAENLRNVSRYFDSAEQIVIGVGLSPA-VENDIDNFKKKISTATDY 232
T+ TL YVV QA+ + LRNVS Y A+ + I PA V+ DID + I+ +
Sbjct: 172 TTTTLQYVVYQADSAVDKLRNVSDYLAQAKLVGIDRVFLPANVQTDIDAAETDINASAGT 231
Query: 233 LSKKTRDPSKMLPRAIDAMR 252
+S KT++ S + +D++R
Sbjct: 232 ISDKTKENSDNIQDLLDSVR 251
>Medtr1g108460.2 | transmembrane protein, putative | HC |
chr1:49022991-49027799 | 20130731
Length = 439
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 75/212 (35%), Positives = 114/212 (53%), Gaps = 9/212 (4%)
Query: 46 WLRSAAEDAASPA-VNSTTLVLAQERTRRKDFFHHFRRYNGGWNITNNNYITSVLSTAIP 104
W + A +P + TL+LA RT R DF F RY+GGW+I++ +Y SV T
Sbjct: 52 WQNEVTQVAPAPGPLGDNTLILAANRTNRPDFLRGFHRYHGGWDISDRHYWASVGFTGAT 111
Query: 105 FLAVAVAWFVIFGVILSVICACYFCCPGEPNGYSKLGYASS---LIILILCTVAAIAGCI 161
+AV WFV FG+ L + + CC N K S LI+L++ T AA GCI
Sbjct: 112 GFILAVLWFVSFGLALVI----HLCCGWGINIKDKGSNRSQRICLILLLIFTFAASTGCI 167
Query: 162 VLYISQGKFDGTTSNTLDYVVSQAEFTAENLRNVSRYFDSAEQIVIGVGLSPA-VENDID 220
+L + Q KF G +TL + V+Q+++T + LRNV+ Y A+ I + L P+ V + ID
Sbjct: 168 LLSVGQDKFHGEALDTLHFFVNQSDYTVQTLRNVTEYLSLAKTINVNQILLPSDVLDGID 227
Query: 221 NFKKKISTATDYLSKKTRDPSKMLPRAIDAMR 252
+++TA D +S+ T + S + R + +R
Sbjct: 228 KLNVELNTAADTISETTDENSVKIRRLFNYVR 259
>Medtr1g108460.1 | transmembrane protein, putative | HC |
chr1:49022976-49027799 | 20130731
Length = 560
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 75/212 (35%), Positives = 114/212 (53%), Gaps = 9/212 (4%)
Query: 46 WLRSAAEDAASPA-VNSTTLVLAQERTRRKDFFHHFRRYNGGWNITNNNYITSVLSTAIP 104
W + A +P + TL+LA RT R DF F RY+GGW+I++ +Y SV T
Sbjct: 52 WQNEVTQVAPAPGPLGDNTLILAANRTNRPDFLRGFHRYHGGWDISDRHYWASVGFTGAT 111
Query: 105 FLAVAVAWFVIFGVILSVICACYFCCPGEPNGYSKLGYASS---LIILILCTVAAIAGCI 161
+AV WFV FG+ L + + CC N K S LI+L++ T AA GCI
Sbjct: 112 GFILAVLWFVSFGLALVI----HLCCGWGINIKDKGSNRSQRICLILLLIFTFAASTGCI 167
Query: 162 VLYISQGKFDGTTSNTLDYVVSQAEFTAENLRNVSRYFDSAEQIVIGVGLSPA-VENDID 220
+L + Q KF G +TL + V+Q+++T + LRNV+ Y A+ I + L P+ V + ID
Sbjct: 168 LLSVGQDKFHGEALDTLHFFVNQSDYTVQTLRNVTEYLSLAKTINVNQILLPSDVLDGID 227
Query: 221 NFKKKISTATDYLSKKTRDPSKMLPRAIDAMR 252
+++TA D +S+ T + S + R + +R
Sbjct: 228 KLNVELNTAADTISETTDENSVKIRRLFNYVR 259
>Medtr2g450550.3 | transmembrane protein, putative | HC |
chr2:22448047-22452347 | 20130731
Length = 423
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 52/96 (54%), Positives = 67/96 (69%), Gaps = 1/96 (1%)
Query: 158 AGCIVLYISQGKFDGTTSNTLDYVVSQAEFTAENLRNVSRYFDSAEQI-VIGVGLSPAVE 216
AGCIVLY +QGKF G+T+ TL YVVSQA+FTAENLRNVS Y D+A+ I V V L V+
Sbjct: 51 AGCIVLYTAQGKFHGSTTTTLKYVVSQADFTAENLRNVSDYLDAAKNIGVDAVFLPSDVQ 110
Query: 217 NDIDNFKKKISTATDYLSKKTRDPSKMLPRAIDAMR 252
+ID K KI+++ LS KT + S+ + +D MR
Sbjct: 111 TNIDTIKTKINSSAVELSTKTHENSEQINDGLDKMR 146
>Medtr2g099140.1 | transmembrane protein, putative | HC |
chr2:42512581-42508885 | 20130731
Length = 515
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 44/216 (20%), Positives = 101/216 (46%), Gaps = 11/216 (5%)
Query: 43 VLPWLRSAAEDAASPAVNSTTLVLAQ-ERTRRKDFFHHFRRYNGGWNITNNNYITSVLST 101
+LP + + A PA ++ + + Q + T R D +F++Y GG++ITN NY +S++ T
Sbjct: 17 ILPQIEAQAFSPGDPAADNVSEQITQRDNTIRVDPLDNFKKYRGGFDITNKNYWSSLIFT 76
Query: 102 AIPFLAVAVAWF---VIFGVILSVICACYFCCPGE------PNGYSKLGYASSLIILILC 152
+ A+ + F +++GVIL + + G+ P Y + + L
Sbjct: 77 GVYGYAIGMLCFLCGILYGVILLITKVYHHTNGGKRMKKVFPCNYKSCDALLIPLAIFLM 136
Query: 153 TVAAIAGCIVLYISQGKFDGTTSNTLDYVVSQAEFTAENLRNVSRYFDSAEQIVIGVGLS 212
+A +A +VL + +F ++D ++ A +E + N + E ++ ++
Sbjct: 137 LIAIVATGLVL-VGSARFHSEAKTSVDIIIKTANKASETIHNTTEALKGMESNLMEANVN 195
Query: 213 PAVENDIDNFKKKISTATDYLSKKTRDPSKMLPRAI 248
+++D+ +K+ A+ + + R +++ + +
Sbjct: 196 VKASSNLDSTAEKLDGASVNIETQARKNRRLINKGL 231
>Medtr2g099140.2 | transmembrane protein, putative | HC |
chr2:42512581-42508885 | 20130731
Length = 529
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/230 (19%), Positives = 100/230 (43%), Gaps = 25/230 (10%)
Query: 43 VLPWLRSAAEDAASPAV---------------NSTTLVLAQERTRRKDFFHHFRRYNGGW 87
+LP + + A PA N + + ++ T R D +F++Y GG+
Sbjct: 17 ILPQIEAQAFSPGDPAAEMLKMTSTMFMFDSDNVSEQITQRDNTIRVDPLDNFKKYRGGF 76
Query: 88 NITNNNYITSVLSTAIPFLAVAVAWF---VIFGVILSVICACYFCCPGE------PNGYS 138
+ITN NY +S++ T + A+ + F +++GVIL + + G+ P Y
Sbjct: 77 DITNKNYWSSLIFTGVYGYAIGMLCFLCGILYGVILLITKVYHHTNGGKRMKKVFPCNYK 136
Query: 139 KLGYASSLIILILCTVAAIAGCIVLYISQGKFDGTTSNTLDYVVSQAEFTAENLRNVSRY 198
+ + L +A +A +VL + +F ++D ++ A +E + N +
Sbjct: 137 SCDALLIPLAIFLMLIAIVATGLVL-VGSARFHSEAKTSVDIIIKTANKASETIHNTTEA 195
Query: 199 FDSAEQIVIGVGLSPAVENDIDNFKKKISTATDYLSKKTRDPSKMLPRAI 248
E ++ ++ +++D+ +K+ A+ + + R +++ + +
Sbjct: 196 LKGMESNLMEANVNVKASSNLDSTAEKLDGASVNIETQARKNRRLINKGL 245