Miyakogusa Predicted Gene

Lj4g3v1632030.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1632030.1 CUFF.49513.1
         (400 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g108590.1 | transcription regulator/zinc ion-binding prote...   534   e-152

>Medtr4g108590.1 | transcription regulator/zinc ion-binding protein
           | HC | chr4:44992689-44988489 | 20130731
          Length = 433

 Score =  534 bits (1375), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 274/411 (66%), Positives = 302/411 (73%), Gaps = 14/411 (3%)

Query: 1   MESAGEWLEKALVELCSKIETGLGLGLDEEIIKGLVSYCNLAEPRDAKEYLDNIIGQEAG 60
           ME+AG+WLEKALVELC+KIETGLGLGLDEEIIKGLVSYC+LA+PRDAKEYLDNIIGQE G
Sbjct: 1   METAGQWLEKALVELCAKIETGLGLGLDEEIIKGLVSYCDLAQPRDAKEYLDNIIGQEVG 60

Query: 61  KAVIEEYLQKRGYSESSASSNVPTTKLSAYVKPSSADISAIGSKKSNRAPKAVAVRGQDA 120
           K+VIEEYL++RG+SE S  SNVPTT L AYVKP S + S  GSKK  R PK V VRG  A
Sbjct: 61  KSVIEEYLRRRGHSEFSTKSNVPTTTLHAYVKPPSVETSTSGSKK--RTPKTVTVRGDHA 118

Query: 121 VPNKNEV-----NQTPASGSESRASQNGNQXXXXXXXXXXXXXLAEAAKGSIVFQQGRPC 175
            PNK  V     ++ PA+ SESR S   NQ             LAEAAKGSIVFQQGRPC
Sbjct: 119 EPNKIAVGSSQGSEIPATSSESRTSHKVNQVSSKKKKAGKTISLAEAAKGSIVFQQGRPC 178

Query: 176 SCQARRHRLISNCLSCGKIVCEQEGEGPCNFCGALVLKEGSSYXXXXXXXXXXXXXXXXX 235
           +CQARRH L+SNCLSCGKIVCEQEGEGPCNFCGALVLKEGSSY                 
Sbjct: 179 ACQARRHNLVSNCLSCGKIVCEQEGEGPCNFCGALVLKEGSSYAGLEESLPPLSETEAAA 238

Query: 236 XXXXXRLVDYDRNSAARTTVIDDQSDYYEIDGNSWLSXXXXXXXXXXXXXXXXXXXXXXN 295
                RLVDYDRN+AARTTVIDDQSDYYE+D N+WLS                      N
Sbjct: 239 EAYAKRLVDYDRNAAARTTVIDDQSDYYELDSNTWLSKEEKDLLKKKQEEMEEAERAKRN 298

Query: 296 RVVVTFDLVGRKVLVNEDEVSELQPDNRILRPPDEREVNRIKPNPTLKIQPVFVDQGFSK 355
           +VVVTFDLVGRKVL+N+DEVSE QPDNRILR PD REVNRI PNPTLKIQPVFVD GFSK
Sbjct: 299 KVVVTFDLVGRKVLLNQDEVSESQPDNRILRAPDVREVNRIIPNPTLKIQPVFVDLGFSK 358

Query: 356 KSAKDRQP------NKGLSKGMCLEISGRVQHDSNDLKYLMRENQLVTASD 400
           KSA DRQ       NKGLSKG+CLEI+GRVQHDS DLK+L +++Q  T S+
Sbjct: 359 KSANDRQASKGKQSNKGLSKGLCLEITGRVQHDSKDLKFL-QQSQFATDSN 408