Miyakogusa Predicted Gene

Lj4g3v0408380.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0408380.1 Non Characterized Hit- tr|D7KNJ5|D7KNJ5_ARALL
Putative uncharacterized protein OS=Arabidopsis
lyrata,28.97,3e-18,seg,NULL,CUFF.47053.1
         (348 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g060280.1 | transmembrane protein | LC | chr1:26234650-262...   295   6e-80
Medtr8g063930.1 | transmembrane protein | HC | chr8:26812665-268...   244   1e-64
Medtr8g090020.1 | transmembrane protein | HC | chr8:37672328-376...   239   3e-63

>Medtr1g060280.1 | transmembrane protein | LC |
           chr1:26234650-26235657 | 20130731
          Length = 335

 Score =  295 bits (754), Expect = 6e-80,   Method: Compositional matrix adjust.
 Identities = 181/341 (53%), Positives = 222/341 (65%), Gaps = 25/341 (7%)

Query: 1   MESESKQVKQHE-MEVLDILKEAVKVYVKNINFITFTIVTSLPFFCVMIYFELLFQKTVV 59
           MESE+K V Q++ M+VLDILK+ V +Y KNINFI FT +TSLP+F +MIYFE LFQ+T++
Sbjct: 1   MESETKLVNQNKNMDVLDILKKTVTIYFKNINFIIFTFLTSLPYFFLMIYFETLFQQTLL 60

Query: 60  EASEFLSQKTADETVEVISLLLSEDKADFNYVHELGSFIDKIFSKDYLPVLIQLGFIYLV 119
            + + +S     E + +            +Y+ E  SF++     DYLP+LIQLGFIY V
Sbjct: 61  LSPQIISSLPLFEKIYMFG------NDTLSYIGE-PSFVN-----DYLPLLIQLGFIYTV 108

Query: 120 PLQVLELCSAILTMDLASKLRSGDNNLS---LTLKQMFQNSIIDISIMKGTFITSLYMLF 176
           PL VLE  SA++T+ LASKL S +N+     +++K MFQNS  DISIMK TF TSLYML 
Sbjct: 109 PLHVLEFFSAVITIGLASKLSSEENHNDTSLMSIKHMFQNSN-DISIMKRTFTTSLYMLA 167

Query: 177 LSAYLLITFPWT-LNNFYCLSEAFGDYIFSAIISLVCCLVLAKLLMVYLEWSSILNMSIV 235
           LS  LLI  PWT +   Y L  AFG YIF A IS   C+ + KLLMVYLEWS+I NMSI 
Sbjct: 168 LSFGLLIACPWTVIGTCYGLYSAFGCYIFFATIS---CVAIGKLLMVYLEWSAIWNMSIA 224

Query: 236 ISVLDGIYGFGALRVSYAFSRGNQKRXXXXXXXXXXXXXXXXXXXXXXESYERGIGIFVQ 295
            SVLDGIYG  ALRVSY +S GNQKR                        Y+ G GIF+ 
Sbjct: 225 TSVLDGIYGIRALRVSYFYSSGNQKRGLVLMLVFFVYGVFLRLICIYFGCYKGGSGIFLL 284

Query: 296 I---GVLTVVNTLKWVSCMIYFYDCKKRTMEKKV-DEELGK 332
           I   G+LTVVN LKWVSC+IYF DCK+R ME KV DEE+GK
Sbjct: 285 IGIVGILTVVNILKWVSCVIYFNDCKERKMEMKVDDEEIGK 325


>Medtr8g063930.1 | transmembrane protein | HC |
           chr8:26812665-26816284 | 20130731
          Length = 394

 Score =  244 bits (622), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 144/339 (42%), Positives = 201/339 (59%), Gaps = 31/339 (9%)

Query: 1   MESESKQVKQHEMEVLDILKEAVKVYVKNINFITFTIVTSLPFFCVMIYFELLFQKTVVE 60
           MESE+   K+ ++EV DILK A+ +YVKN NF+ FT +TSLP FC+M+YFE+  Q+T+VE
Sbjct: 1   MESENNLKKKQKLEVSDILKAAIIIYVKNFNFMIFTFLTSLPLFCIMVYFEIQLQETIVE 60

Query: 61  ASEFLSQKTADETVEVISLLLSEDKADFNYVHE--LGSFIDKIFSKDYLPVLIQLGFIYL 118
               ++ K  D                   VH    GS +D   +  Y   LIQLG IY+
Sbjct: 61  TFHIVNSKDVD-------------------VHHSYTGSILDYFMNNYYYLKLIQLGLIYI 101

Query: 119 VPLQVLELCSAILTMDLASKLRSGDNNLSLTLKQMFQNSIIDISIMKGTFITSLYMLFLS 178
            PL VLE  +AI+T+DLASKL S      +TLK MF+ S +D S ++G+F+T +Y++FL+
Sbjct: 102 FPLHVLEFGTAIITVDLASKLGSQQEK-KMTLKVMFEKS-LDSSKLRGSFLTFIYVVFLT 159

Query: 179 AYLLITFPWTLNN--FYCLSEAFGDYIFSAIISLVCCLVLAKLLMVYLEWSSILNMSIVI 236
               +   W + N  FY    +F       + +L+C ++ AKLL +YLEWSSI N S+VI
Sbjct: 160 TTHQLGLLWIVINCYFYLKDLSF------VVFALICSMLFAKLLKMYLEWSSIWNTSLVI 213

Query: 237 SVLDGIYGFGALRVSYAFSRGNQKRXXXXXXXXXXXXXXXXXXXXXXESYERGIGIFVQI 296
           S+L+GIYG  AL +S  FSRG Q++                        YE+G GIF+Q+
Sbjct: 214 SILEGIYGIDALVLSLNFSRGCQRKGLFLMLIFFAWGQFLRFFCYYVGGYEQGNGIFIQV 273

Query: 297 GVLTVVNTLKWVSCMIYFYDCKKRTMEKKVDEELGKAIE 335
           G+  +V  LKWV  MIYF+DCK+R +EKK+DEELGK + 
Sbjct: 274 GLFCMVIPLKWVVFMIYFHDCKERYLEKKMDEELGKDVR 312


>Medtr8g090020.1 | transmembrane protein | HC |
           chr8:37672328-37673497 | 20130731
          Length = 295

 Score =  239 bits (609), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 138/264 (52%), Positives = 177/264 (67%), Gaps = 21/264 (7%)

Query: 1   MESESKQV--KQHEMEVLDILKEAVKVYVKNINFITFTIVTSLPFFCVMIYFELLFQKTV 58
           MESE+K V  ++  ++VLDIL E + +Y KNINFI FT++TSLPFF +M+YFE LFQ+T+
Sbjct: 1   MESEAKHVIKQKKNIDVLDILGETLTIYFKNINFIIFTLLTSLPFFFLMVYFETLFQQTL 60

Query: 59  VEASEFLSQKTADETVEVISLLLSEDKADFNYVHELGSFIDKIFSKDYLPVLIQLGFIYL 118
           V+            T ++I  L   ++    +   +  +    FSKDYLP+LIQLGFIY 
Sbjct: 61  VQ------------TPKIILPLPFHERNQLRFYSVIDIYNGPSFSKDYLPLLIQLGFIYT 108

Query: 119 VPLQVLELCSAILTMDLASKL-RSGDNNLSLTLKQMFQNSIIDISIMKGTFITSLYMLFL 177
           +PL  LE CS +LTMDLASKL  + + N  ++LK MFQNS ID+S MKGTFITSLY L L
Sbjct: 109 IPLHFLEFCSKVLTMDLASKLIINSEENPKMSLKHMFQNS-IDVSTMKGTFITSLYTLAL 167

Query: 178 SAYLLITFPWTLNNFYCLSEAFGDYIFSAIISLVCCLVLAKLLMVYLEWSSILNMSIVIS 237
           S  LLI FPWT++N  C       YI   I   +C + + KLLM+YLE S+I NMSIV+S
Sbjct: 168 SNCLLIAFPWTVSN--CFIFTRWCYI---IFGSICFIAVGKLLMIYLECSAIWNMSIVVS 222

Query: 238 VLDGIYGFGALRVSYAFSRGNQKR 261
           VL+GIYG GAL+ SY FS GN KR
Sbjct: 223 VLEGIYGTGALKGSYYFSSGNHKR 246