Miyakogusa Predicted Gene

Lj4g3v0281050.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0281050.1 Non Characterized Hit- tr|B9S5S2|B9S5S2_RICCO
Putative uncharacterized protein OS=Ricinus communis
G,46.96,1e-17,seg,NULL,NODE_50762_length_576_cov_12.697917.path1.1
         (114 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g094608.1 | hypothetical protein | HC | chr4:38357776-3835...   159   4e-40

>Medtr4g094608.1 | hypothetical protein | HC |
           chr4:38357776-38359021 | 20130731
          Length = 215

 Score =  159 bits (403), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 80/113 (70%), Positives = 90/113 (79%), Gaps = 4/113 (3%)

Query: 1   MKLLGLSEEQKCGLXXXXXXXXXXXXNSCHCEGGFYSKIVGVEGPKCRKEVLRLDGWIKH 60
           + LLG+SEE++               +SCHCEGGFYSKIVGVEGPKC+KEVLRLDGWIKH
Sbjct: 106 VNLLGMSEEKR---DGFEGDEGGGDCDSCHCEGGFYSKIVGVEGPKCKKEVLRLDGWIKH 162

Query: 61  FLNGDGVEKLEPFRLAHMLLGKAAFISEGADGGFEGLEFPSTIQEYLHTDPPS 113
           F+N DGVEK EP RLAH+LLGKAAFIS GAD GF  L+FPSTIQE+LHTDPPS
Sbjct: 163 FMN-DGVEKKEPLRLAHLLLGKAAFISGGADSGFGDLDFPSTIQEFLHTDPPS 214