Miyakogusa Predicted Gene

Lj4g3v0109430.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0109430.1 Non Characterized Hit- tr|Q8L8V8|Q8L8V8_ARATH
Putative uncharacterized protein OS=Arabidopsis
thalia,45.26,3e-18,Pollen_Ole_e_I,Pollen Ole e 1 allergen/extensin;
seg,NULL,CUFF.46427.1
         (182 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g133932.1 | pollen Ole e I family allergens | HC | chr4:56...   209   2e-54

>Medtr4g133932.1 | pollen Ole e I family allergens | HC |
           chr4:56060052-56057651 | 20130731
          Length = 206

 Score =  209 bits (531), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 103/150 (68%), Positives = 122/150 (81%), Gaps = 2/150 (1%)

Query: 33  EQVSLMLQLSSRDEVVQMAGYGEEKLSTVLITGSVNCQARFHNGDQPHAWPIPGAWVGVH 92
           E    +  LSSR+EVV++AGYGEEKLSTVLITGS++C    +N    +AWPIPGA V V+
Sbjct: 39  EDYQNLFGLSSREEVVEIAGYGEEKLSTVLITGSLHCDGP-NNNHHSNAWPIPGALVSVN 97

Query: 93  CHSSASERKGKSMEVRGVTDEFGDFMVDLPSHLHSIPNLENICVVKVHRIPKGSLCQPA- 151
           C S A+ER GK+M   GVTDEFGDFMVDLPS+LH+IPNLE IC VKVH+IPKGSLC+PA 
Sbjct: 98  CQSHATERTGKAMVANGVTDEFGDFMVDLPSYLHAIPNLEKICRVKVHKIPKGSLCRPAR 157

Query: 152 HVKKHKGVLELSSIGNGIRTYDAGSIRILH 181
           HV K KG+L+LS+IGNGIRTYDAG+IRI H
Sbjct: 158 HVNKQKGLLKLSTIGNGIRTYDAGTIRIQH 187