Miyakogusa Predicted Gene

Lj3g3v3617770.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v3617770.1 tr|F2E2N0|F2E2N0_HORVD Predicted protein
OS=Hordeum vulgare var. distichum PE=2
SV=1,47.27,3e-18,Tudor/PWWP/MBT,NULL; seg,NULL; PWWP,PWWP; no
description,NULL,NODE_101934_length_723_cov_12.434301.path2.1
         (209 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g077550.1 | tudor/PWWP/MBT superfamily protein | HC | chr4...   248   3e-66
Medtr5g007980.1 | tudor/PWWP/MBT superfamily protein | HC | chr5...   211   5e-55
Medtr8g015580.1 | tudor/PWWP/MBT superfamily protein | HC | chr8...   165   2e-41
Medtr8g015580.2 | tudor/PWWP/MBT superfamily protein | HC | chr8...   165   2e-41

>Medtr4g077550.1 | tudor/PWWP/MBT superfamily protein | HC |
           chr4:29681931-29685319 | 20130731
          Length = 736

 Score =  248 bits (633), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 140/263 (53%), Positives = 159/263 (60%), Gaps = 54/263 (20%)

Query: 1   MDYGVGSIVWVRRRNGSWWPGQILGLDDLSASHLTSP-RSGTPVKLLGREDASVDWYNLE 59
           MD GVGSIVWVRRRNGSWWPGQI+G DD S SHLTSP RSGTPVKLLGREDASVDWYNLE
Sbjct: 1   MDCGVGSIVWVRRRNGSWWPGQIIGPDDHSTSHLTSPPRSGTPVKLLGREDASVDWYNLE 60

Query: 60  KSKRVKAFRCGEFDDCIEKAESAQGAPLKKREKYARREDAILHALELERQMLQKQAKIEV 119
           KSKRVKAFRCGEFDD IEK E++   PLKKREKYARREDAILHALELER++++KQ K++ 
Sbjct: 61  KSKRVKAFRCGEFDDYIEKIEASHEMPLKKREKYARREDAILHALELERELVKKQVKLDN 120

Query: 120 AKD-------GNQPSGVV------------------------------------------ 130
           A D        +   GVV                                          
Sbjct: 121 AYDQRDCRRSNSVKKGVVVALPVETEGNDDDDDEKHANLKSYRSCENEIDGGCFPLEVAR 180

Query: 131 ----DVSEARPQMRGLQDFGLKITPLKGKLSSSVDPYISQKRTVDEGAQDXXXXXXXXXX 186
               D+S+A P MRGLQD GL+I PLK  LSS VD ++SQK  ++EG +           
Sbjct: 181 DVEVDLSKATPLMRGLQDVGLEIAPLKTILSSPVDSHVSQKILINEGVRALASDSLCTGR 240

Query: 187 XXHMNGDGQVARRVKRSKYVYFP 209
               NG  Q+  R KRS   YFP
Sbjct: 241 TLQANGARQMTYRTKRSCPFYFP 263


>Medtr5g007980.1 | tudor/PWWP/MBT superfamily protein | HC |
           chr5:1623285-1617399 | 20130731
          Length = 621

 Score =  211 bits (536), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 100/116 (86%), Positives = 106/116 (91%)

Query: 2   DYGVGSIVWVRRRNGSWWPGQILGLDDLSASHLTSPRSGTPVKLLGREDASVDWYNLEKS 61
           D  VGS+VWVRRRNGSWWPGQIL  DDL+ASHLTSPRSGTPVKLLGREDASVDWYNLEKS
Sbjct: 10  DCAVGSLVWVRRRNGSWWPGQILDPDDLAASHLTSPRSGTPVKLLGREDASVDWYNLEKS 69

Query: 62  KRVKAFRCGEFDDCIEKAESAQGAPLKKREKYARREDAILHALELERQMLQKQAKI 117
           KRVK FRCGEFD  IE+AE+A G PLKKREKYARREDAILHALELERQML+KQ K+
Sbjct: 70  KRVKPFRCGEFDASIERAETALGMPLKKREKYARREDAILHALELERQMLRKQDKL 125


>Medtr8g015580.1 | tudor/PWWP/MBT superfamily protein | HC |
           chr8:5106477-5100906 | 20130731
          Length = 782

 Score =  165 bits (418), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 79/113 (69%), Positives = 91/113 (80%)

Query: 1   MDYGVGSIVWVRRRNGSWWPGQILGLDDLSASHLTSPRSGTPVKLLGREDASVDWYNLEK 60
           ++  VG +VWVRRRNGSWWPG+I+ LD+LS   L SPRSGTPVKLLGR+DASVDWYNLEK
Sbjct: 18  INASVGGLVWVRRRNGSWWPGRIMSLDELSDGCLVSPRSGTPVKLLGRDDASVDWYNLEK 77

Query: 61  SKRVKAFRCGEFDDCIEKAESAQGAPLKKREKYARREDAILHALELERQMLQK 113
           SKRVKAFRC E+ + IEKA+++     KK  KYARREDAILHALELE   L K
Sbjct: 78  SKRVKAFRCREYAEAIEKAKASAAGLGKKAVKYARREDAILHALELESAHLDK 130


>Medtr8g015580.2 | tudor/PWWP/MBT superfamily protein | HC |
           chr8:5106185-5100906 | 20130731
          Length = 782

 Score =  165 bits (418), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 79/113 (69%), Positives = 91/113 (80%)

Query: 1   MDYGVGSIVWVRRRNGSWWPGQILGLDDLSASHLTSPRSGTPVKLLGREDASVDWYNLEK 60
           ++  VG +VWVRRRNGSWWPG+I+ LD+LS   L SPRSGTPVKLLGR+DASVDWYNLEK
Sbjct: 18  INASVGGLVWVRRRNGSWWPGRIMSLDELSDGCLVSPRSGTPVKLLGRDDASVDWYNLEK 77

Query: 61  SKRVKAFRCGEFDDCIEKAESAQGAPLKKREKYARREDAILHALELERQMLQK 113
           SKRVKAFRC E+ + IEKA+++     KK  KYARREDAILHALELE   L K
Sbjct: 78  SKRVKAFRCREYAEAIEKAKASAAGLGKKAVKYARREDAILHALELESAHLDK 130