Miyakogusa Predicted Gene

Lj3g3v3527450.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v3527450.1 Non Characterized Hit- tr|F6I128|F6I128_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,41.88,0.0000000000004,seg,NULL,CUFF.45952.1
         (151 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g075330.1 | hypothetical protein | HC | chr4:28777193-2875...    80   7e-16

>Medtr4g075330.1 | hypothetical protein | HC | chr4:28777193-28758743
            | 20130731
          Length = 1961

 Score = 80.1 bits (196), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 51/135 (37%), Positives = 63/135 (46%), Gaps = 3/135 (2%)

Query: 18   IFHRILQSLGRAATGERMPDELMITCIDITSQSFLATIETLSSALDASQDMLNFXX-XXX 76
            ++H    S GRA TGER+P+EL+ TCID   QSFL TI  LS  LDAS+DMLN       
Sbjct: 1353 VYHD--DSKGRATTGERIPNELIFTCIDNICQSFLDTIVRLSPVLDASEDMLNILACQVE 1410

Query: 77   XXXXXXXXXXXXXXXXXXXXXXKCATSGLKILSELKLVPSEAXXXXXXXXXXXXXXXXXX 136
                                  KCA+SGLK+LSE KL+PS+A                  
Sbjct: 1411 LLLLFTRTVSNGLSIDTSLLVMKCASSGLKLLSEFKLLPSKANLIMKLLLTLLLLVLQSN 1470

Query: 137  XXXXHSGGATNKSSG 151
                H   A ++ SG
Sbjct: 1471 SLNLHFNAAADEGSG 1485