Miyakogusa Predicted Gene

Lj3g3v3359730.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v3359730.2 tr|I1JZE3|I1JZE3_SOYBN Methylenetetrahydrofolate
reductase OS=Glycine max GN=Gma.2387 PE=3 SV=1,90.32,0,no
description,NULL; MTHFR,Methylenetetrahydrofolate reductase; seg,NULL;
fadh2_euk: methylenetetrah,CUFF.45670.2
         (415 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g040105.1 | methylenetetrahydrofolate reductase | HC | chr...   767   0.0  
Medtr5g007060.1 | methylenetetrahydrofolate reductase | LC | chr...    92   1e-18

>Medtr1g040105.1 | methylenetetrahydrofolate reductase | HC |
           chr1:14723769-14718084 | 20130731
          Length = 595

 Score =  767 bits (1980), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 357/397 (89%), Positives = 384/397 (96%), Gaps = 1/397 (0%)

Query: 1   MKVIEKVRXXXXXDPDRVVFSFEFFPPKTEDGVDNLFERMDRMVAHNPSFCDITWGAGGS 60
           MKVI+K+R     DP++VVFSFEFFPPKTEDGVDNLFERMDRMVAHNPSFCDITWGAGG+
Sbjct: 1   MKVIDKIRSANA-DPNKVVFSFEFFPPKTEDGVDNLFERMDRMVAHNPSFCDITWGAGGT 59

Query: 61  TADVTLEIANKMQNIVCVETMIHLTCTNMPVEKIDNALQTIKSNGLQNVLALRGDPPHGQ 120
           TAD+TLEIANKMQNI+CVETM+HLTCTNMPV+KID+AL+TIKSNG+QNVLALRGDPPHGQ
Sbjct: 60  TADLTLEIANKMQNIICVETMMHLTCTNMPVDKIDHALETIKSNGIQNVLALRGDPPHGQ 119

Query: 121 DKFVQTEGGFACARDLVKHIRAKYGDYFGITVAGYPEAHPDAIGSDGVATTEAYQNELTY 180
           +KFVQTEGGFACARDLV+HIR+KYGDYFGIT+AGYPEAHPD IG+DG+AT E YQ++L Y
Sbjct: 120 EKFVQTEGGFACARDLVQHIRSKYGDYFGITIAGYPEAHPDVIGADGLATAEGYQSDLAY 179

Query: 181 LKSKVDAGADLIVTQLFYDTDIFLKFVNDCLQIGITCPIVPGIMPINNYKGFIRMTGFCK 240
           LKSKVDAGADLIVTQLFYDTDIFLKFVNDC QIGITCPIVPGIMPINNYKGFIRMTGFCK
Sbjct: 180 LKSKVDAGADLIVTQLFYDTDIFLKFVNDCRQIGITCPIVPGIMPINNYKGFIRMTGFCK 239

Query: 241 TKIPAEIMAALEPIKDNEEAVKLYGIHLGTEMCRKILAHGIKTLHLYTLNMEKSALAILT 300
           TKIPAEIMAALEPIKDNEEAVK YGIHLGTEMC+KI+AHGIKT+HLYTLNMEKSALAILT
Sbjct: 240 TKIPAEIMAALEPIKDNEEAVKAYGIHLGTEMCKKIMAHGIKTVHLYTLNMEKSALAILT 299

Query: 301 SLGLIEESKISRSLPWRRPTNVFRVREDVRPIFWANRPKSYISRTIGWDQYPHGRWGDSG 360
           SLGLIEESKISRSLPWRRPTNVFRV+EDVRPIFWANRPKSYISRTIGW+QYPHGRW DSG
Sbjct: 300 SLGLIEESKISRSLPWRRPTNVFRVKEDVRPIFWANRPKSYISRTIGWEQYPHGRWSDSG 359

Query: 361 NPSYGALTDYQFMRPRARDKKLTEEWAVPLRSIEDIY 397
           NPSYGALTDYQFMRPRA+DKKL EEWAVPL+SIEDIY
Sbjct: 360 NPSYGALTDYQFMRPRAKDKKLIEEWAVPLKSIEDIY 396


>Medtr5g007060.1 | methylenetetrahydrofolate reductase | LC |
           chr5:1192998-1190936 | 20130731
          Length = 267

 Score = 92.0 bits (227), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 41/48 (85%), Positives = 46/48 (95%)

Query: 89  MPVEKIDNALQTIKSNGLQNVLALRGDPPHGQDKFVQTEGGFACARDL 136
           MPV+KID+AL+TIKSN +QNVLALRGDPPHGQ+KFVQT GGFACARDL
Sbjct: 1   MPVDKIDHALETIKSNEIQNVLALRGDPPHGQEKFVQTGGGFACARDL 48