Miyakogusa Predicted Gene

Lj3g3v3154040.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v3154040.1 gi|4138130|emb|AJ011828.1|.path2.1
         (658 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g096290.1 | NDX1 homeobox protein | HC | chr2:41127648-411...   783   0.0  
Medtr4g063030.1 | NDX1 homeobox protein | HC | chr4:23290408-233...   757   0.0  
Medtr2g096290.2 | NDX1 homeobox protein | HC | chr2:41128161-411...   636   0.0  
Medtr4g061370.1 | Myb/SANT-like DNA-binding domain protein | LC ...    86   1e-16

>Medtr2g096290.1 | NDX1 homeobox protein | HC |
           chr2:41127648-41136119 | 20130731
          Length = 971

 Score =  783 bits (2021), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 413/666 (62%), Positives = 476/666 (71%), Gaps = 56/666 (8%)

Query: 1   MLSILLILCEAESLSFLDEVASSQQSLDLAKSVALEVFDLLKTTFGRNPGHFTTADRSYP 60
           +LSILL LCEAES+S+LDEVAS+ +SLDL+KSVALEVFDLLK  FGRNPGH   ADRS+P
Sbjct: 353 ILSILLSLCEAESISYLDEVASTARSLDLSKSVALEVFDLLKKAFGRNPGHLA-ADRSHP 411

Query: 61  MGHLQLNAMRLADIFSDDSNFRSYMTVCFTKVLTAIISLSHGDFLSCWCSSNLPEIEEDA 120
           MG +QLNAMRLADIFSDDSNFRSYM +CFT+VLTAIISLSHGDFLSCWCSSNL E EEDA
Sbjct: 412 MGLVQLNAMRLADIFSDDSNFRSYMILCFTEVLTAIISLSHGDFLSCWCSSNLSETEEDA 471

Query: 121 SLEYDTFAAVGWVLDNTSSQDLPNATILEFNLVPNRVSSVSYAHHRTSFFVKIIANLHCF 180
           S+EYD  AAVGWVL NTS  D+ +AT LEFNL P+ +   SYAHHRTS FVK  ANLHCF
Sbjct: 472 SIEYDISAAVGWVLHNTSP-DVKDATNLEFNLTPSSMLKASYAHHRTSLFVKFFANLHCF 530

Query: 181 VPNICEEQERNLFVLKVLEYLQMDLSNLLPGFSFASDVPKAATVSKNLRSLLSHAESLIP 240
           VPN+CEEQERNLFV KV+E LQMDLSNLLPGFSF +D PK +  SKNLRSLLSHAESLIP
Sbjct: 531 VPNVCEEQERNLFVRKVIECLQMDLSNLLPGFSFDTDAPKVSIASKNLRSLLSHAESLIP 590

Query: 241 KFLNEEDVHLLRVFLGELQSLFTSTGIGGNHVQ---DNKFEELSWDKFSKL-VNKHYQEA 296
            FLN EDV LLRVF GELQSLFTS G G N VQ   D K EE SWDKFSKL +N+ YQ A
Sbjct: 591 NFLNVEDVQLLRVFFGELQSLFTSNGFGRNRVQKTQDGKCEESSWDKFSKLNINECYQGA 650

Query: 297 HSTA-RCSSLIQQEPSELSKKGGNLKEGMSENSSFPGTGQCTTRAEITNLGNDLSRQDQV 355
            S   R   L  +E ++L+KKGG + EGMSENS+ P   Q  T AE T  GN  SRQ QV
Sbjct: 651 QSAGGRPLPLTSKEQADLNKKGGKV-EGMSENSANPNLEQRNTTAEDTIQGNGPSRQSQV 709

Query: 356 EDKDIAGKTVSRGARDFDKDCQNAEXXXXXXXXAKGKSVIDHMDSGELSKSVAHPKKVTV 415
           E+K I+GKT S GARD DKD    E        AKGK+V+ H+D+GELSKS    K+V V
Sbjct: 710 ENKGISGKTASGGARDIDKDAHKIETSCSDASSAKGKNVVVHVDNGELSKSNERLKRVGV 769

Query: 416 GETPEDEKVETVPRRKRKRTIMNDEQVMLIERALLDEPDMQRNAASLQSWADKLSLHGSD 475
            E PEDEK+E   R+KRKRTIMN EQV +IE ALLDEPDMQRNAA LQSWADKLS  G +
Sbjct: 770 EENPEDEKIELAQRKKRKRTIMNAEQVTMIENALLDEPDMQRNAALLQSWADKLSSDGPE 829

Query: 476 VTPSQIKNWLNNRKARLART-AKDV--PAADVAKSVPDKPRGPSLGPYASPDNYGDASNA 532
           VT SQ+KNWLNNRKARLART AKDV   AADV   V D+ RGP++G + SP         
Sbjct: 830 VTSSQLKNWLNNRKARLARTAAKDVRPAAADVDNQVSDRQRGPTIGSHGSP--------- 880

Query: 533 RQDLLSLAKIASGDNPEPSLAELKAELVDAPPEIVRCNVGQHVVLTDTRGKEIGRGKVVQ 592
                                                + GQ+VVL   +G+EIG+G V Q
Sbjct: 881 ------------------------------------VSAGQYVVLVGVQGEEIGKGTVFQ 904

Query: 593 VQGKWYAKSLEESETYVVDVIELKTDKETRVPYPSEATGTSFAEAASKLGVMRVLWSPRR 652
            Q KW+ K+LEES T VVDV EL+ DK  R+PY SEA GT+FA+A +K G+MR++W   +
Sbjct: 905 TQDKWFGKNLEESATCVVDVCELRVDKGLRLPYSSEAIGTTFADAQTKFGIMRIVWDLNK 964

Query: 653 IIALQS 658
           ++ L++
Sbjct: 965 VLVLRT 970


>Medtr4g063030.1 | NDX1 homeobox protein | HC |
           chr4:23290408-23307176 | 20130731
          Length = 926

 Score =  757 bits (1955), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 404/699 (57%), Positives = 472/699 (67%), Gaps = 106/699 (15%)

Query: 1   MLSILLILCEAESLSFLDEVASSQQSLDLAKSVALEVFDLLKTTFGRNPGHFTTADRSYP 60
           +LSILL LCEAE++SF+D+VA+S QSLDLAKSVA+EV DLLK+TFGRNPG+ TT DR YP
Sbjct: 292 ILSILLSLCEAENISFVDQVATSPQSLDLAKSVAVEVLDLLKSTFGRNPGYPTTTDRRYP 351

Query: 61  MGHLQLNAMRLADIFSDDSNFRSYMTVCFTKVLTAIISLSHGDFLSCWCSSNLPEIEEDA 120
           +G LQ+NAMR+ADIFSDD+ FRSY+T  FTKVLTAIIS+SH DFLS WCSSNL E EEDA
Sbjct: 352 IGLLQINAMRVADIFSDDTCFRSYITTYFTKVLTAIISVSHADFLSSWCSSNLSETEEDA 411

Query: 121 SLEYDTFAAVGWVLDNTSSQDLPNATILEFNLVPNRVSSVSYAHHRTSFFVKIIANLHCF 180
           S+EYD FA+VGW+LDN+SS DL N T+LE +++ N + S SYAH+RTS  VKIIANLHC 
Sbjct: 412 SVEYDLFASVGWILDNSSSMDLQNPTVLELHMIRNIMPSASYAHNRTSLLVKIIANLHCH 471

Query: 181 VPNICEEQERNLFVLKVLEYLQMDLSNLLPGFSFASDVPKAATVSKNLRSLLSHAESLIP 240
           VP  CEE ERN F    LE LQMDLS LLPGFSFASD PKAATVSKNLRSLLSHAESL+P
Sbjct: 472 VPGRCEESERNFFFRTFLECLQMDLSKLLPGFSFASDAPKAATVSKNLRSLLSHAESLMP 531

Query: 241 KFLNEEDVHLLRVFLGELQSLFTSTGIGGNHVQDNKFEELSWDKFSKLVNKHYQEAHSTA 300
            FL+EEDV +LRVF  E+Q+LFTS+G GGN VQ                     EA S  
Sbjct: 532 NFLDEEDVQILRVFFREIQTLFTSSGSGGNRVQ---------------------EAQSIG 570

Query: 301 RCSSLIQ-QEPSELSKKGGNLKEGMSENSSFPGTGQCTTRAEITNLGNDLSRQDQVEDKD 359
             SS +Q  EP+EL K G NLKEGMS+NS+FP  GQ  TR E TNLG+DL+RQ QV  K 
Sbjct: 571 IFSSPLQVNEPAELDKVG-NLKEGMSDNSAFPSIGQHNTRVENTNLGDDLNRQHQVGGKG 629

Query: 360 IAGKTVSRGARDFDKDCQNAEXXXXXXXXAKGKSVIDHMDSGELSKSVAHPKKVTVGETP 419
           +A  TV RG RD DKD QNAE        AKGK+V++H D+GE S+S+    K+ V E P
Sbjct: 630 MASNTVLRGVRDTDKDAQNAETSGSDTSSAKGKNVLNHADNGE-SESMKRLGKIVVDEIP 688

Query: 420 EDEKVETVPRRKRKRT----------------------------------------IMND 439
           EDEKVE++ +RKRKRT                                        IMND
Sbjct: 689 EDEKVESLQKRKRKRTMVNDKLVELMENALVDEPDMQRNEPEDEKVGPLQKKKRKTIMND 748

Query: 440 EQVMLIERALLDEPDMQRNAASLQSWADKLSLHGSDVTPSQIKNWLNNRKARLARTAKDV 499
           + V L+ERALLDEP+MQRNAASLQSWA+KLS HGS+VTPSQ+KNWLNNRKA+LART+KD 
Sbjct: 749 KMVELMERALLDEPEMQRNAASLQSWAEKLSHHGSEVTPSQLKNWLNNRKAKLARTSKD- 807

Query: 500 PAADVAKSVPDKPRGPSLGPYASPDNYGDASNARQDLLSLAKIASGDNPEPSLAELKAEL 559
                  S PDK +GP      SP+N G                                
Sbjct: 808 ------SSTPDKQKGPVRVSSDSPNNLG-------------------------------- 829

Query: 560 VDAPPEIVRCNVGQHVVLTDTRGKEIGRGKVVQVQGKWYAKSLEESETYVVDVIELKTDK 619
              P E+VRCNVGQ  V+ + RG+EIG+GKVVQV GKWY KSLEE   YV+DV EL  DK
Sbjct: 830 ---PLEVVRCNVGQSAVVVNVRGEEIGKGKVVQVNGKWYGKSLEELGVYVMDVYELYADK 886

Query: 620 ETRVPYPSEATGTSFAEAASKLGVMRVLWSPRRIIALQS 658
             ++P+PSE  GTSFAEA  KLG MRVLW  RRI+ LQS
Sbjct: 887 GMKLPFPSEIYGTSFAEAERKLGAMRVLWDSRRILVLQS 925


>Medtr2g096290.2 | NDX1 homeobox protein | HC |
           chr2:41128161-41135157 | 20130731
          Length = 767

 Score =  636 bits (1641), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 332/475 (69%), Positives = 369/475 (77%), Gaps = 8/475 (1%)

Query: 1   MLSILLILCEAESLSFLDEVASSQQSLDLAKSVALEVFDLLKTTFGRNPGHFTTADRSYP 60
           +LSILL LCEAES+S+LDEVAS+ +SLDL+KSVALEVFDLLK  FGRNPGH   ADRS+P
Sbjct: 292 ILSILLSLCEAESISYLDEVASTARSLDLSKSVALEVFDLLKKAFGRNPGHLA-ADRSHP 350

Query: 61  MGHLQLNAMRLADIFSDDSNFRSYMTVCFTKVLTAIISLSHGDFLSCWCSSNLPEIEEDA 120
           MG +QLNAMRLADIFSDDSNFRSYM +CFT+VLTAIISLSHGDFLSCWCSSNL E EEDA
Sbjct: 351 MGLVQLNAMRLADIFSDDSNFRSYMILCFTEVLTAIISLSHGDFLSCWCSSNLSETEEDA 410

Query: 121 SLEYDTFAAVGWVLDNTSSQDLPNATILEFNLVPNRVSSVSYAHHRTSFFVKIIANLHCF 180
           S+EYD  AAVGWVL NTS  D+ +AT LEFNL P+ +   SYAHHRTS FVK  ANLHCF
Sbjct: 411 SIEYDISAAVGWVLHNTSP-DVKDATNLEFNLTPSSMLKASYAHHRTSLFVKFFANLHCF 469

Query: 181 VPNICEEQERNLFVLKVLEYLQMDLSNLLPGFSFASDVPKAATVSKNLRSLLSHAESLIP 240
           VPN+CEEQERNLFV KV+E LQMDLSNLLPGFSF +D PK +  SKNLRSLLSHAESLIP
Sbjct: 470 VPNVCEEQERNLFVRKVIECLQMDLSNLLPGFSFDTDAPKVSIASKNLRSLLSHAESLIP 529

Query: 241 KFLNEEDVHLLRVFLGELQSLFTSTGIGGNHV---QDNKFEELSWDKFSKL-VNKHYQEA 296
            FLN EDV LLRVF GELQSLFTS G G N V   QD K EE SWDKFSKL +N+ YQ A
Sbjct: 530 NFLNVEDVQLLRVFFGELQSLFTSNGFGRNRVQKTQDGKCEESSWDKFSKLNINECYQGA 589

Query: 297 HST-ARCSSLIQQEPSELSKKGGNLKEGMSENSSFPGTGQCTTRAEITNLGNDLSRQDQV 355
            S   R   L  +E ++L+KKGG + EGMSENS+ P   Q  T AE T  GN  SRQ QV
Sbjct: 590 QSAGGRPLPLTSKEQADLNKKGGKV-EGMSENSANPNLEQRNTTAEDTIQGNGPSRQSQV 648

Query: 356 EDKDIAGKTVSRGARDFDKDCQNAEXXXXXXXXAKGKSVIDHMDSGELSKSVAHPKKVTV 415
           E+K I+GKT S GARD DKD    E        AKGK+V+ H+D+GELSKS    K+V V
Sbjct: 649 ENKGISGKTASGGARDIDKDAHKIETSCSDASSAKGKNVVVHVDNGELSKSNERLKRVGV 708

Query: 416 GETPEDEKVETVPRRKRKRTIMNDEQVMLIERALLDEPDMQRNAASLQSWADKLS 470
            E PEDEK+E   R+KRKRTIMN EQV +IE ALLDEPDMQRNAA LQSWADKLS
Sbjct: 709 EENPEDEKIELAQRKKRKRTIMNAEQVTMIENALLDEPDMQRNAALLQSWADKLS 763


>Medtr4g061370.1 | Myb/SANT-like DNA-binding domain protein | LC |
           chr4:22691367-22696834 | 20130731
          Length = 1316

 Score = 85.9 bits (211), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 37/59 (62%), Positives = 45/59 (76%)

Query: 140 QDLPNATILEFNLVPNRVSSVSYAHHRTSFFVKIIANLHCFVPNICEEQERNLFVLKVL 198
           +D+   + LEFNL P+ +   SYAHHRTS FVK  ANLHCFVPN+C EQERNLFV K++
Sbjct: 916 EDISMESNLEFNLTPSNMLKDSYAHHRTSLFVKFFANLHCFVPNVCVEQERNLFVCKIM 974