Miyakogusa Predicted Gene

Lj3g3v2888360.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2888360.1 Non Characterized Hit- tr|B9TC41|B9TC41_RICCO
Putative uncharacterized protein (Fragment)
OS=Ricinus,77.59,5e-18,DUF1218,Protein of unknown function DUF1218;
seg,NULL,CUFF.44884.1
         (160 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g045673.1 | transmembrane protein, putative | HC | chr4:15...   240   4e-64
Medtr2g089050.1 | transmembrane protein, putative | HC | chr2:37...   231   2e-61
Medtr4g092130.1 | transmembrane protein, putative | HC | chr4:36...   184   3e-47
Medtr2g010840.1 | transmembrane protein, putative | HC | chr2:25...   176   1e-44

>Medtr4g045673.1 | transmembrane protein, putative | HC |
           chr4:15516756-15514692 | 20130731
          Length = 160

 Score =  240 bits (612), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 115/160 (71%), Positives = 130/160 (81%)

Query: 1   MARVVGIFLCLLIIIMDVAAGILAFQAEIAQNKVKHLRLWIFECREPSHQAFMXXXXXXX 60
           MARV GI +CLLI+IMD+AAGIL F+AEIAQNKVKHL++WIFECREPSH AFM       
Sbjct: 1   MARVGGIVVCLLIVIMDIAAGILGFEAEIAQNKVKHLKVWIFECREPSHDAFMLGLGAAV 60

Query: 61  XXXXXXXXXNLLGGCSCICSQQEFEKAAPSRQLSVACLILTWVLLAVGLSMLVIGALSNN 120
                    NLLGGC+C+CSQQEFEKA+  RQLSV CLILTWV++AVGLSMLVIGA+SNN
Sbjct: 61  LLGLSHVIANLLGGCNCVCSQQEFEKASSHRQLSVVCLILTWVVVAVGLSMLVIGAMSNN 120

Query: 121 RSDGSCGLSHHHFLSIGGISCFVHGLFCVAYYVSATSSMD 160
           RS  SCG SHHHFLSIGG+SCFVHGLF V YY+  T+SMD
Sbjct: 121 RSKDSCGFSHHHFLSIGGMSCFVHGLFSVIYYIVTTASMD 160


>Medtr2g089050.1 | transmembrane protein, putative | HC |
           chr2:37567644-37566243 | 20130731
          Length = 158

 Score =  231 bits (589), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 110/158 (69%), Positives = 127/158 (80%)

Query: 1   MARVVGIFLCLLIIIMDVAAGILAFQAEIAQNKVKHLRLWIFECREPSHQAFMXXXXXXX 60
           MAR VGIFLCLLI+IMDV AGIL  +AEIAQNKVKHLRLWIFECR+PSH+AFM       
Sbjct: 1   MAREVGIFLCLLIVIMDVTAGILGIEAEIAQNKVKHLRLWIFECRDPSHKAFMFGLAASI 60

Query: 61  XXXXXXXXXNLLGGCSCICSQQEFEKAAPSRQLSVACLILTWVLLAVGLSMLVIGALSNN 120
                    NLLGGC C C QQ+ +K++P+RQLS+A LILTW++LAVGLSMLVIG  +NN
Sbjct: 61  LLSLAHVIANLLGGCGCFCFQQDIQKSSPNRQLSMAILILTWIVLAVGLSMLVIGTKTNN 120

Query: 121 RSDGSCGLSHHHFLSIGGISCFVHGLFCVAYYVSATSS 158
           RS G+CG + HHFLSIGGI CFVHGLFCV+YYVSAT+S
Sbjct: 121 RSSGTCGFTDHHFLSIGGILCFVHGLFCVSYYVSATAS 158


>Medtr4g092130.1 | transmembrane protein, putative | HC |
           chr4:36573376-36574588 | 20130731
          Length = 164

 Score =  184 bits (467), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 84/158 (53%), Positives = 116/158 (73%)

Query: 1   MARVVGIFLCLLIIIMDVAAGILAFQAEIAQNKVKHLRLWIFECREPSHQAFMXXXXXXX 60
           M R  G  +C+++I+MDV AGIL  QAEIAQNKVK L++W+ ECR+PS+QAF        
Sbjct: 1   MVRNYGFLVCIVVILMDVVAGILGIQAEIAQNKVKDLKIWVLECRDPSYQAFKLGLSASI 60

Query: 61  XXXXXXXXXNLLGGCSCICSQQEFEKAAPSRQLSVACLILTWVLLAVGLSMLVIGALSNN 120
                    ++LGGC CI S++E+++A  +RQL++A LI +W++L V  SML+IG L+N+
Sbjct: 61  LLVLAHAIAHVLGGCICIKSKEEYKRATSNRQLAMAFLIFSWIVLGVAFSMLIIGTLANS 120

Query: 121 RSDGSCGLSHHHFLSIGGISCFVHGLFCVAYYVSATSS 158
           +S  SCG+S+H FLSIGGI CF+HGLF VAYYVSAT++
Sbjct: 121 KSRESCGISNHRFLSIGGILCFIHGLFTVAYYVSATAT 158


>Medtr2g010840.1 | transmembrane protein, putative | HC |
           chr2:2549420-2547747 | 20130731
          Length = 176

 Score =  176 bits (445), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 80/158 (50%), Positives = 110/158 (69%)

Query: 1   MARVVGIFLCLLIIIMDVAAGILAFQAEIAQNKVKHLRLWIFECREPSHQAFMXXXXXXX 60
           MA+  G  +C+L+++MD+ AGIL  QAEI QNK K +++WIF+CR PSHQAF        
Sbjct: 1   MAKNYGFLICILVMVMDIVAGILGIQAEITQNKEKPMKMWIFDCRYPSHQAFQLGLAALI 60

Query: 61  XXXXXXXXXNLLGGCSCICSQQEFEKAAPSRQLSVACLILTWVLLAVGLSMLVIGALSNN 120
                    NLLGGC C+ S+ ++  A  ++QLS+A LI +W+++AV  SML+IG L+N+
Sbjct: 61  LLSLAHIIANLLGGCVCVWSKDQYRSATANKQLSMAFLIFSWLVMAVAFSMLIIGTLANS 120

Query: 121 RSDGSCGLSHHHFLSIGGISCFVHGLFCVAYYVSATSS 158
           RS  SCG+ +H FL IGGI CF+HGLF V YYVSAT++
Sbjct: 121 RSRKSCGIFNHRFLFIGGILCFIHGLFTVPYYVSATAT 158