Miyakogusa Predicted Gene

Lj3g3v2722480.1
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2722480.1 Non Characterized Hit- tr|E3QB59|E3QB59_COLGM
Putative uncharacterized protein OS=Colletotrichum
gra,33.71,2e-18,DUF947,Protein of unknown function DUF947; SUBFAMILY
NOT NAMED,NULL; UNCHARACTERIZED,Protein of unkn,CUFF.44503.1
         (250 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g058150.1 | ribosomal RNA processing-like protein | HC | c...   311   3e-85
Medtr6g075250.1 | ribosomal RNA processing-like protein | HC | c...   266   2e-71

>Medtr5g058150.1 | ribosomal RNA processing-like protein | HC |
           chr5:24029438-24035320 | 20130731
          Length = 252

 Score =  311 bits (798), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 144/209 (68%), Positives = 177/209 (84%)

Query: 42  LADVTFEELQKARSNGAHAFFQKPKKDQSLKRANKNRPMEVSCKKPVPVFREVIQAPKKV 101
           LADVTFEELQKARSNGAHAFF+KP +D+ LKRANKNRPME S KKPVP FR+VIQAPKKV
Sbjct: 44  LADVTFEELQKARSNGAHAFFKKPAEDKKLKRANKNRPMEASSKKPVPAFRDVIQAPKKV 103

Query: 102 IRDPRFESLCGNLDTDGFKQRYNFLYEDVLPAEKQALKKDLKKYRDPKRTNEIEERLSWV 161
           +RDPRFESLCG  D DGF++RYNFLYE+ LPAE+QALK+ L+KY+DP+R +EIEER++WV
Sbjct: 104 VRDPRFESLCGTFDNDGFRKRYNFLYENDLPAERQALKRQLRKYKDPERRSEIEERIAWV 163

Query: 162 DKQLKSGSAKNIDAEILAXXXXXXXXXXXXXXXPYYIKKSDIRKQKLIEKYNELKASGKL 221
           DKQLKS S KNI+ +ILA               P+Y+KKS+IRKQ+L++KYN LK+SG L
Sbjct: 164 DKQLKSDSTKNIETQILAKHKKKEREAAKQGKRPFYLKKSEIRKQRLVDKYNHLKSSGNL 223

Query: 222 EAFLEKRRRRNAAKDHRYIPYRRPGDNVE 250
           E+++EK+R+RNAAKDHR++PYRR G+NVE
Sbjct: 224 ESYIEKKRKRNAAKDHRFMPYRRSGENVE 252


>Medtr6g075250.1 | ribosomal RNA processing-like protein | HC |
           chr6:27870233-27873584 | 20130731
          Length = 250

 Score =  266 bits (679), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 131/208 (62%), Positives = 165/208 (79%), Gaps = 1/208 (0%)

Query: 42  LADVTFEELQKARSNGAHAFFQKPKKDQSLKRANKNRPMEVSCKKPVPVFREVIQAPKKV 101
           LADVTFEEL+  RSNGAHAFF+K  +D+ LKR NKNRPME S KKPVPVFR+VI APKKV
Sbjct: 42  LADVTFEELKNTRSNGAHAFFKKRGEDKKLKRLNKNRPMEASSKKPVPVFRDVIHAPKKV 101

Query: 102 IRDPRFESLCGNL-DTDGFKQRYNFLYEDVLPAEKQALKKDLKKYRDPKRTNEIEERLSW 160
             DPRF SLCG+L D++ F+++Y FLYE+ LPAE+Q LK++LKK +DP+R +EIEE +SW
Sbjct: 102 ACDPRFNSLCGDLLDSNRFRKKYKFLYENDLPAERQTLKRELKKCKDPERRSEIEELVSW 161

Query: 161 VDKQLKSGSAKNIDAEILAXXXXXXXXXXXXXXXPYYIKKSDIRKQKLIEKYNELKASGK 220
           +DKQLK  SA+NI+AEILA               P+Y+KKS+IR+Q+LIEKY  LKASG 
Sbjct: 162 IDKQLKPDSARNIEAEILARHKKKQREAAKEGRRPFYLKKSEIRRQRLIEKYKHLKASGN 221

Query: 221 LEAFLEKRRRRNAAKDHRYIPYRRPGDN 248
           L++++EKRR+RNAAKDHR++PY R  DN
Sbjct: 222 LDSYIEKRRKRNAAKDHRFMPYARSVDN 249