Miyakogusa Predicted Gene

Lj3g3v2708770.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2708770.1 CUFF.44457.1
         (351 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g016460.1 | F-box protein, putative | LC | chr7:5176746-51...    75   1e-13
Medtr8g015770.1 | FBD, F-box and LRR protein, putative | LC | ch...    65   7e-11
Medtr8g018340.1 | F-box/FBD-like domain protein | LC | chr8:6229...    64   3e-10
Medtr8g015830.2 | F-box/FBD-like domain protein, putative | HC |...    62   9e-10
Medtr8g015830.1 | F-box/FBD-like domain protein, putative | HC |...    62   9e-10
Medtr4g119700.1 | F-box protein | LC | chr4:49610075-49612030 | ...    62   1e-09
Medtr7g025650.1 | F-box/RNI superfamily protein, putative | LC |...    61   2e-09
Medtr6g006730.1 | F-box/RNI superfamily protein, putative | LC |...    58   1e-08
Medtr8g015680.1 | F-box/FBD-like domain protein | LC | chr8:5174...    50   3e-06

>Medtr7g016460.1 | F-box protein, putative | LC |
           chr7:5176746-5178947 | 20130731
          Length = 469

 Score = 75.1 bits (183), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 54/178 (30%), Positives = 93/178 (52%), Gaps = 7/178 (3%)

Query: 149 SEDMKLSSLQILRLEKVKVDLQHGIDWFFTSCPMLREIRLVNIGNLKNLKVYGLSHLKHL 208
           +  +K  SL++L L+ V    ++ I+   + CP++  I L  + N+K+L ++GL  LK +
Sbjct: 113 NHSIKFFSLRVLSLKHVLSRDENAIEHLISCCPLIEHITLRFVDNMKSLSIHGLLKLKTV 172

Query: 209 EIDSCHELRSVEIQAPDLQNLVLSDEIMSYGFILDLKIDSQTCKNLRKLTLCNSTIQGST 268
           +++   E   V I AP L+ L    +     F    KI    C+NL+ L+L +  I    
Sbjct: 173 KVEGIQE---VYIDAPYLEKLRFCPD----DFFAPYKIGFDRCQNLKYLSLESCIIANKW 225

Query: 269 FSLVFSECINVVSLVLDGCMNFFEIRISSQKLRKLVVTRCFNLCVTDVSAPNLTSFSF 326
           F  +F +   + SL LD C    +I ISS +L+ L ++ C ++   ++ APNL SF +
Sbjct: 226 FLELFPKFPFLESLELDSCTMSEKINISSVQLKVLEISFCSDMKEINIDAPNLLSFVY 283


>Medtr8g015770.1 | FBD, F-box and LRR protein, putative | LC |
           chr8:5192885-5195249 | 20130731
          Length = 551

 Score = 65.5 bits (158), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 59/201 (29%), Positives = 93/201 (46%), Gaps = 23/201 (11%)

Query: 138 LVNINLSLAEPSEDMKLSSLQILRLEKVKVDLQHGIDWFFTSCPMLREI----------- 186
           +  I +  A  +  +K  SL++L L  V V  +H I+   + CP++  I           
Sbjct: 173 MPGIGVDTAFMNHSIKFFSLRVLSLWGVLVRDEHAIEHLISCCPLIEHITVSFCSVLRPN 232

Query: 187 ----RLVNIGNLKNLKVYGLSHLKHLEIDSCHELRSVEIQAPDLQNLVLSDEIMSYGFIL 242
               RL+  G++K+L + GL  LK +++    E   + I AP L+ L          F  
Sbjct: 233 GATNRLLE-GSMKSLSMVGLLKLKTVDVRGIQE---IYIDAPCLEKLFYCPGYFDEPF-- 286

Query: 243 DLKIDSQTCKNLRKLTLCNSTIQGSTFSLVFSECINVVSLVLDGCMNFFEIRISSQKLRK 302
             KID   C+NL+ L+L    I    F  +F +   + SL L+ C     I ISS +L+ 
Sbjct: 287 --KIDFDRCQNLKYLSLMRDIITDKWFLELFPKFPFLESLKLNNCTMAERIDISSDQLKV 344

Query: 303 LVVTRCFNLCVTDVSAPNLTS 323
           L ++ C NL   ++ APNL S
Sbjct: 345 LGLSNCSNLKEVNIDAPNLLS 365


>Medtr8g018340.1 | F-box/FBD-like domain protein | LC |
           chr8:6229615-6232095 | 20130731
          Length = 579

 Score = 63.5 bits (153), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 59/197 (29%), Positives = 90/197 (45%), Gaps = 27/197 (13%)

Query: 152 MKLSSLQILRLEKVKVDLQHGIDWFFTSCPMLREIRLVNI------------------GN 193
           +K  SL+IL L+ V    +H I+   + CP++  I L +                   G 
Sbjct: 169 IKFFSLRILSLKHVLSRDEHAIEHLISCCPLIEHITLRDCSMLSPNGATNHLLESHTSGV 228

Query: 194 LKNLKVYGLSHLKHLEIDSCHELRSVEIQAPDLQNLVLSDEIMSYGFILDLKIDSQTCKN 253
           +K+L + GL  LK +++    E   V I +P L+ L          F    KID   C+N
Sbjct: 229 IKSLSMDGLLKLKTVDVQGIQE---VYIDSPSLEKLRYCPGYFDAPF----KIDFDRCQN 281

Query: 254 LRKLTLC--NSTIQGSTFSLVFSECINVVSLVLDGCMNFFEIRISSQKLRKLVVTRCFNL 311
           L+ L LC  +  I    F  +F +   + SL LD C     I ISS +L+ L ++ C NL
Sbjct: 282 LKYLDLCLDSGIITDKWFLELFRKFRFLESLKLDDCTMAERINISSVQLKVLELSDCSNL 341

Query: 312 CVTDVSAPNLTSFSFCN 328
              ++ APNL S  +C+
Sbjct: 342 KEVNIDAPNLLSCVYCS 358


>Medtr8g015830.2 | F-box/FBD-like domain protein, putative | HC |
           chr8:5202774-5204799 | 20130731
          Length = 506

 Score = 62.0 bits (149), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 60/196 (30%), Positives = 91/196 (46%), Gaps = 28/196 (14%)

Query: 152 MKLSSLQILRLEKVKVDLQHGIDWFFTSCPMLREIRL-------VNI-----------GN 193
           +K  SL++L L  V    +H I+   + CP++  I L        N+           G 
Sbjct: 178 IKFFSLKVLSLWAVLSRDEHAIEHLISCCPLIEHITLKCCSVLIPNVATNFLLESDTSGV 237

Query: 194 LKNLKVYGLSHLKHLEIDSCHELRSVEIQAPDLQNLVLSDEIMSYGFILDLKIDSQTCKN 253
           +K+L ++GL  LK +++    E   V I AP L+            F    KID   C+N
Sbjct: 238 MKSLNMHGLLKLKTVDVQGIQE---VYIDAPCLEKFCYCPGDFDAPF----KIDFDRCQN 290

Query: 254 LRKL---TLCNSTIQGSTFSLVFSECINVVSLVLDGCMNFFEIRISSQKLRKLVVTRCFN 310
           L+ L   +L +S I    F  +FS+   + SL L+ C  F  I ISS +L+ L ++ C N
Sbjct: 291 LKYLDLLSLKSSIITDKWFLELFSKFPFLESLKLNNCRMFERINISSVQLKVLELSNCSN 350

Query: 311 LCVTDVSAPNLTSFSF 326
           L   ++ APNL S  F
Sbjct: 351 LKEVNIDAPNLLSCVF 366


>Medtr8g015830.1 | F-box/FBD-like domain protein, putative | HC |
           chr8:5202774-5207538 | 20130731
          Length = 553

 Score = 62.0 bits (149), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 60/196 (30%), Positives = 91/196 (46%), Gaps = 28/196 (14%)

Query: 152 MKLSSLQILRLEKVKVDLQHGIDWFFTSCPMLREIRL-------VNI-----------GN 193
           +K  SL++L L  V    +H I+   + CP++  I L        N+           G 
Sbjct: 178 IKFFSLKVLSLWAVLSRDEHAIEHLISCCPLIEHITLKCCSVLIPNVATNFLLESDTSGV 237

Query: 194 LKNLKVYGLSHLKHLEIDSCHELRSVEIQAPDLQNLVLSDEIMSYGFILDLKIDSQTCKN 253
           +K+L ++GL  LK +++    E   V I AP L+            F    KID   C+N
Sbjct: 238 MKSLNMHGLLKLKTVDVQGIQE---VYIDAPCLEKFCYCPGDFDAPF----KIDFDRCQN 290

Query: 254 LRKL---TLCNSTIQGSTFSLVFSECINVVSLVLDGCMNFFEIRISSQKLRKLVVTRCFN 310
           L+ L   +L +S I    F  +FS+   + SL L+ C  F  I ISS +L+ L ++ C N
Sbjct: 291 LKYLDLLSLKSSIITDKWFLELFSKFPFLESLKLNNCRMFERINISSVQLKVLELSNCSN 350

Query: 311 LCVTDVSAPNLTSFSF 326
           L   ++ APNL S  F
Sbjct: 351 LKEVNIDAPNLLSCVF 366


>Medtr4g119700.1 | F-box protein | LC | chr4:49610075-49612030 |
           20130731
          Length = 546

 Score = 61.6 bits (148), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 54/189 (28%), Positives = 93/189 (49%), Gaps = 19/189 (10%)

Query: 150 EDMKLSSLQILRLEKVKVDLQHGIDWFFTSCPMLREIRL-----VNIGN----LKNLKVY 200
           + +K  SL +L L +V +  +H I+   + CP++  I L     +++G     +K L + 
Sbjct: 174 QSIKFFSLIVLSLWEVLLGNEHAIEHLISCCPLIEHITLNRCLVLSLGGGTKLMKCLSML 233

Query: 201 GLSHLKHLEIDSCHELRSVEIQAPDLQNLVLSDEIMSYGFILDLKIDSQTCKNLRKLTLC 260
           GL  LK +++    E   V + AP L+NL    +++   F    KI   +C+NL+ + L 
Sbjct: 234 GLPKLKTVDVQGIQE---VYVDAPCLENLYYCHDVLDAPF----KIHFDSCRNLKVVYLS 286

Query: 261 N---STIQGSTFSLVFSECINVVSLVLDGCMNFFEIRISSQKLRKLVVTRCFNLCVTDVS 317
           N   +TI    F  +F +   +  L    C     I ISS +L+ L ++ C NL   ++ 
Sbjct: 287 NLKGNTITNEWFLDLFLKFPFLEILKFANCTMSETINISSVQLKVLELSHCLNLKEVNID 346

Query: 318 APNLTSFSF 326
           APNL S ++
Sbjct: 347 APNLLSCTY 355


>Medtr7g025650.1 | F-box/RNI superfamily protein, putative | LC |
           chr7:8553699-8551701 | 20130731
          Length = 557

 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 51/187 (27%), Positives = 94/187 (50%), Gaps = 19/187 (10%)

Query: 149 SEDMKLSSLQILRLEKVKVDLQHGIDWFFTSCPMLREIRLVN---------IGNLKNLKV 199
           ++ +K  SL++L L  V ++ +H I+   + CP +  I L +         +  +K+L +
Sbjct: 186 NQSIKFFSLRVLSLWIVLLEDEHAIEHLISCCPFIEHITLKHCSVLSPGGGVKLMKSLSM 245

Query: 200 YGLSHLKHLEIDSCHELRSVEIQAPDLQNLVLSDEIMSYGFILDLKIDSQTCKNLRKL-- 257
           +GL  LK +++   H ++ V I  P L+ L    ++++  +    KI   +C+NL+ L  
Sbjct: 246 HGLPKLKTVDV---HGIQEVYIDVPSLEYLYYCHDVLNAPY----KIHFDSCRNLKGLDL 298

Query: 258 -TLCNSTIQGSTFSLVFSECINVVSLVLDGCMNFFEIRISSQKLRKLVVTRCFNLCVTDV 316
            +L  +TI    F  +FS+   +  L    C     I ISS +L+ L ++ C N+   ++
Sbjct: 299 FSLEGNTITDKWFLELFSKFPFLERLKFVKCTMSETINISSVQLKVLELSGCHNMKEVNI 358

Query: 317 SAPNLTS 323
            APNL S
Sbjct: 359 DAPNLLS 365


>Medtr6g006730.1 | F-box/RNI superfamily protein, putative | LC |
           chr6:1180071-1182124 | 20130731
          Length = 519

 Score = 57.8 bits (138), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 52/186 (27%), Positives = 91/186 (48%), Gaps = 12/186 (6%)

Query: 152 MKLSSLQILRLEKVKVDLQHGIDWFFTSCPMLREIRL------VNIGNLKNLKVYGLSHL 205
           +K  SL+ L L +V    +H I+   + CP++  I L       + G  + ++   +S L
Sbjct: 173 IKFFSLRELSLTRVLFGDEHAINQLISFCPLIEYITLDLCEVLSSGGGTRYMEYVSISGL 232

Query: 206 KHLEIDSCHELRSVEIQAPDLQNLVLSDEIMSYGFILDLKIDSQTCKNLRKLTLCN--ST 263
           ++L+      ++ V I A  L+N   + +  +YG     KID   C+NL++L L +  ST
Sbjct: 233 QNLKSVDVSAIQDVSIDASSLENFCYNTK--NYG--APSKIDFDRCRNLKELYLWSVEST 288

Query: 264 IQGSTFSLVFSECINVVSLVLDGCMNFFEIRISSQKLRKLVVTRCFNLCVTDVSAPNLTS 323
                F  +F +   + SL L+ C    +I ISS +L++L      NL   ++ +PNL S
Sbjct: 289 STNKWFLELFPKFPFLESLKLNNCKMPKKIDISSVRLKRLEFMHSSNLKELNIDSPNLIS 348

Query: 324 FSFCNF 329
           F +  +
Sbjct: 349 FGYSGW 354


>Medtr8g015680.1 | F-box/FBD-like domain protein | LC |
           chr8:5174025-5177813 | 20130731
          Length = 545

 Score = 50.4 bits (119), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 60/198 (30%), Positives = 90/198 (45%), Gaps = 28/198 (14%)

Query: 152 MKLSSLQILRLEKVKVDLQHGIDWFFTSCPMLREIRLV------------------NIGN 193
           +K  SL++L L +V  + +H I+   + CP++  I L                     G 
Sbjct: 170 IKCFSLRVLSLWEVLCEYEHAIENLISRCPLIEHITLKCCSVLSPSVTTNHLFESDTPGI 229

Query: 194 LKNLKVYGLSHLKHLEIDSCHELRSVEIQAPDLQNLVLSDEIMSYGFILDLKIDSQTCKN 253
           +K+L + GLS LK +++    E   V I AP L+N           F    KID + CKN
Sbjct: 230 MKSLSMRGLSKLKTVDVQGIQE---VYIDAPCLENFCYCPGDFDAPF----KIDFERCKN 282

Query: 254 LRKLTLCNS---TIQGSTFSLVFSECINVVSLVLDGCMNFFEIRISSQKLRKLVVTRCFN 310
           L+KL L +     I    F  +F +   + SL LD C    +I ISS +L+ L +  C N
Sbjct: 283 LKKLNLLSLMSIIITDKWFLELFPKFPFLESLKLDNCTMSEKINISSVQLKVLELFDCSN 342

Query: 311 LCVTDVSAPNLTSFSFCN 328
           L   ++ APNL    +C 
Sbjct: 343 LKEVNIDAPNLLLCVYCG 360