Miyakogusa Predicted Gene

Lj3g3v2518940.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2518940.2 Non Characterized Hit- tr|D7KQB8|D7KQB8_ARALL
Putative uncharacterized protein OS=Arabidopsis
lyrata,34.16,0.000000003,no description,Homeodomain-like; PREDICTED:
SIMILAR TO SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPEN,CUFF.44125.2
         (436 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g118330.2 | late elongated hypocotyl-like protein | HC | c...   432   e-121
Medtr7g118330.1 | late elongated hypocotyl-like protein | HC | c...   432   e-121
Medtr5g076960.1 | myb transcription factor | HC | chr5:32831868-...   115   9e-26
Medtr3g064500.1 | myb transcription factor | HC | chr3:29064791-...   114   2e-25
Medtr6g477860.1 | myb transcription factor | HC | chr6:28638569-...   113   3e-25
Medtr0123s0070.1 | myb transcription factor | HC | scaffold0123:...   100   3e-21
Medtr0123s0070.2 | myb transcription factor | HC | scaffold0123:...   100   4e-21
Medtr1g067000.2 | myb transcription factor | HC | chr1:28822118-...    99   1e-20
Medtr1g067000.1 | myb transcription factor | HC | chr1:28822118-...    99   1e-20
Medtr8g028655.1 | myb transcription factor | HC | chr8:10999892-...    97   3e-20
Medtr1g083180.1 | myb-like DNA-binding domain, shaqkyf class pro...    56   8e-08
Medtr5g075760.1 | myb transcription factor | LC | chr5:32235189-...    55   1e-07
Medtr5g075790.1 | myb-like DNA-binding domain, shaqkyf class pro...    53   6e-07
Medtr5g088010.1 | MYB-like DNA-binding domain, shaqkyf class pro...    51   2e-06
Medtr5g488160.1 | MYB-like DNA-binding domain, shaqkyf class pro...    51   2e-06
Medtr5g088060.1 | MYB-like DNA-binding domain, shaqkyf class pro...    51   2e-06
Medtr5g027550.1 | MYB-like DNA-binding domain, shaqkyf class pro...    51   3e-06

>Medtr7g118330.2 | late elongated hypocotyl-like protein | HC |
           chr7:49115628-49123834 | 20130731
          Length = 754

 Score =  432 bits (1110), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 236/430 (54%), Positives = 280/430 (65%), Gaps = 12/430 (2%)

Query: 1   MDAAD-SSSEEVIVKTRKPYTITKQRERWTEEEHNRFLEALKLHGRAWQRIEEHIGTKSA 59
           MDAA  SS E+V++KTRKPYTITKQRERWTE+EHNRFLEALKL+GRAWQRIEEHIGTK+A
Sbjct: 1   MDAAAYSSGEDVVLKTRKPYTITKQRERWTEDEHNRFLEALKLYGRAWQRIEEHIGTKTA 60

Query: 60  VQIRSHAQKFFTKLEKEALVKGVPIGQAIDIDIXXXXXXXXXXXXXXXXXXAVTATLQSG 119
           VQIRSHAQKFF+KLEKEALVKG  +GQA+DIDI                    T TL SG
Sbjct: 61  VQIRSHAQKFFSKLEKEALVKGAALGQALDIDIPPPRPKRKPSNPYPRKTNVGTPTLHSG 120

Query: 120 EKDVKLNXXXXXXXXXXXXKLTLDLEKEPLPEKHNVDEGPTTVKENKDGDHLEVFTVGPD 179
            K  K              K  +D EKE L E+H  +E PTTVKEN D + L+V T+  +
Sbjct: 121 AKYGK----PLIAIASSHGKQAMDFEKESLLEEHKDEERPTTVKENNDENCLKVLTILKE 176

Query: 180 XXXXXXXXXXXXXXXXXXXXXXXXALKEITPSLKEVIALDGTNESFITIELGNRKLATND 239
                                    ++  TPS+KEVI  D TNESF T E+ N+ L  +D
Sbjct: 177 APCSSVSSAIKSSISMSVPQTNSCTIRGFTPSVKEVITRDETNESFPTTEIENQMLKIDD 236

Query: 240 GKQT---NGCSKDSKLEDSEASQVKLVQSEKTDGLNCAFTIDGMQSNQNYPRHVTVQVFD 296
           GK T   +G  + SKLE+      K VQSEKTDGL  A TID MQSNQNYPRH+TV V D
Sbjct: 237 GKHTQKNDGICRTSKLENCSP---KSVQSEKTDGLTSALTIDEMQSNQNYPRHITVHVVD 293

Query: 297 GNVSTNTQNPSQDMRLRDSIFQPIGEVNGQPKVFTNSAASNTGESQSNTGQSSIHQSFLP 356
           GN  T+TQ+PSQ+M ++DS FQPIG +N QP +F N AASNT E+Q+N  +SS HQSF P
Sbjct: 294 GNFGTSTQSPSQNMLIQDSTFQPIGGINVQPNLFANPAASNTSENQNNMARSSSHQSFPP 353

Query: 357 YPPFTQHNQDDYQSFIHMSSTFSSLVVSNLLQNPXXXXXXXXXXTYWPHARPETLADSSR 416
            PPF  HN  DYQSF++MSSTFSSL+VS LLQ+P          T+WP+A  E+ ADS  
Sbjct: 354 CPPFA-HNHADYQSFLNMSSTFSSLIVSTLLQHPAAHAAASFAATFWPYANVESSADSPA 412

Query: 417 CSEGGFPCRQ 426
           CS+GGFP RQ
Sbjct: 413 CSQGGFPSRQ 422


>Medtr7g118330.1 | late elongated hypocotyl-like protein | HC |
           chr7:49115628-49123834 | 20130731
          Length = 754

 Score =  432 bits (1110), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 236/430 (54%), Positives = 280/430 (65%), Gaps = 12/430 (2%)

Query: 1   MDAAD-SSSEEVIVKTRKPYTITKQRERWTEEEHNRFLEALKLHGRAWQRIEEHIGTKSA 59
           MDAA  SS E+V++KTRKPYTITKQRERWTE+EHNRFLEALKL+GRAWQRIEEHIGTK+A
Sbjct: 1   MDAAAYSSGEDVVLKTRKPYTITKQRERWTEDEHNRFLEALKLYGRAWQRIEEHIGTKTA 60

Query: 60  VQIRSHAQKFFTKLEKEALVKGVPIGQAIDIDIXXXXXXXXXXXXXXXXXXAVTATLQSG 119
           VQIRSHAQKFF+KLEKEALVKG  +GQA+DIDI                    T TL SG
Sbjct: 61  VQIRSHAQKFFSKLEKEALVKGAALGQALDIDIPPPRPKRKPSNPYPRKTNVGTPTLHSG 120

Query: 120 EKDVKLNXXXXXXXXXXXXKLTLDLEKEPLPEKHNVDEGPTTVKENKDGDHLEVFTVGPD 179
            K  K              K  +D EKE L E+H  +E PTTVKEN D + L+V T+  +
Sbjct: 121 AKYGK----PLIAIASSHGKQAMDFEKESLLEEHKDEERPTTVKENNDENCLKVLTILKE 176

Query: 180 XXXXXXXXXXXXXXXXXXXXXXXXALKEITPSLKEVIALDGTNESFITIELGNRKLATND 239
                                    ++  TPS+KEVI  D TNESF T E+ N+ L  +D
Sbjct: 177 APCSSVSSAIKSSISMSVPQTNSCTIRGFTPSVKEVITRDETNESFPTTEIENQMLKIDD 236

Query: 240 GKQT---NGCSKDSKLEDSEASQVKLVQSEKTDGLNCAFTIDGMQSNQNYPRHVTVQVFD 296
           GK T   +G  + SKLE+      K VQSEKTDGL  A TID MQSNQNYPRH+TV V D
Sbjct: 237 GKHTQKNDGICRTSKLENCSP---KSVQSEKTDGLTSALTIDEMQSNQNYPRHITVHVVD 293

Query: 297 GNVSTNTQNPSQDMRLRDSIFQPIGEVNGQPKVFTNSAASNTGESQSNTGQSSIHQSFLP 356
           GN  T+TQ+PSQ+M ++DS FQPIG +N QP +F N AASNT E+Q+N  +SS HQSF P
Sbjct: 294 GNFGTSTQSPSQNMLIQDSTFQPIGGINVQPNLFANPAASNTSENQNNMARSSSHQSFPP 353

Query: 357 YPPFTQHNQDDYQSFIHMSSTFSSLVVSNLLQNPXXXXXXXXXXTYWPHARPETLADSSR 416
            PPF  HN  DYQSF++MSSTFSSL+VS LLQ+P          T+WP+A  E+ ADS  
Sbjct: 354 CPPFA-HNHADYQSFLNMSSTFSSLIVSTLLQHPAAHAAASFAATFWPYANVESSADSPA 412

Query: 417 CSEGGFPCRQ 426
           CS+GGFP RQ
Sbjct: 413 CSQGGFPSRQ 422


>Medtr5g076960.1 | myb transcription factor | HC |
          chr5:32831868-32828390 | 20130731
          Length = 420

 Score =  115 bits (288), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 48/64 (75%), Positives = 61/64 (95%)

Query: 13 VKTRKPYTITKQRERWTEEEHNRFLEALKLHGRAWQRIEEHIGTKSAVQIRSHAQKFFTK 72
          +K RKPYTITKQRE+WT+EEH +FLEALKL+GRAW++IEEH+GTK+AVQIRSHAQKFF+K
Sbjct: 31 LKARKPYTITKQREKWTDEEHKKFLEALKLYGRAWRKIEEHVGTKTAVQIRSHAQKFFSK 90

Query: 73 LEKE 76
          + ++
Sbjct: 91 INRD 94


>Medtr3g064500.1 | myb transcription factor | HC |
           chr3:29064791-29066449 | 20130731
          Length = 353

 Score =  114 bits (285), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 49/85 (57%), Positives = 68/85 (80%)

Query: 6   SSSEEVIVKTRKPYTITKQRERWTEEEHNRFLEALKLHGRAWQRIEEHIGTKSAVQIRSH 65
           S + +  +K RKPYTI+KQRERWT+EEH +FLEALKL+GRAW+ IEEH+G+K+A+QIRSH
Sbjct: 38  SCANDYALKARKPYTISKQRERWTDEEHKKFLEALKLYGRAWRSIEEHVGSKTAIQIRSH 97

Query: 66  AQKFFTKLEKEALVKGVPIGQAIDI 90
           AQKFF+K+ ++         ++I+I
Sbjct: 98  AQKFFSKILRDTSASITNTKESIEI 122


>Medtr6g477860.1 | myb transcription factor | HC |
           chr6:28638569-28642957 | 20130731
          Length = 467

 Score =  113 bits (283), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 47/63 (74%), Positives = 59/63 (93%)

Query: 14  KTRKPYTITKQRERWTEEEHNRFLEALKLHGRAWQRIEEHIGTKSAVQIRSHAQKFFTKL 73
           K RKPYTITKQRE+WT+EEH +FLEALKL+GR W++IEEHIG+K+A+QIRSHAQKFF+K+
Sbjct: 46  KVRKPYTITKQREKWTDEEHQKFLEALKLYGRGWRQIEEHIGSKTAIQIRSHAQKFFSKV 105

Query: 74  EKE 76
            +E
Sbjct: 106 VRE 108


>Medtr0123s0070.1 | myb transcription factor | HC |
           scaffold0123:45193-37242 | 20130731
          Length = 307

 Score =  100 bits (249), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 45/81 (55%), Positives = 61/81 (75%)

Query: 3   AADSSSEEVIVKTRKPYTITKQRERWTEEEHNRFLEALKLHGRAWQRIEEHIGTKSAVQI 62
           AA +SSE+   K RKPYTITK RE WTE EH++FLEAL+L  R W++IE  +G+K+ +QI
Sbjct: 28  AAVNSSEDASKKIRKPYTITKSRENWTEPEHDKFLEALQLFDRDWKKIEAFVGSKTVIQI 87

Query: 63  RSHAQKFFTKLEKEALVKGVP 83
           RSHAQK+F K++K    + +P
Sbjct: 88  RSHAQKYFLKVQKSGANEHLP 108


>Medtr0123s0070.2 | myb transcription factor | HC |
           scaffold0123:45193-37193 | 20130731
          Length = 286

 Score =  100 bits (248), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 45/81 (55%), Positives = 61/81 (75%)

Query: 3   AADSSSEEVIVKTRKPYTITKQRERWTEEEHNRFLEALKLHGRAWQRIEEHIGTKSAVQI 62
           AA +SSE+   K RKPYTITK RE WTE EH++FLEAL+L  R W++IE  +G+K+ +QI
Sbjct: 28  AAVNSSEDASKKIRKPYTITKSRENWTEPEHDKFLEALQLFDRDWKKIEAFVGSKTVIQI 87

Query: 63  RSHAQKFFTKLEKEALVKGVP 83
           RSHAQK+F K++K    + +P
Sbjct: 88  RSHAQKYFLKVQKSGANEHLP 108


>Medtr1g067000.2 | myb transcription factor | HC |
           chr1:28822118-28815959 | 20130731
          Length = 298

 Score = 98.6 bits (244), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 40/70 (57%), Positives = 56/70 (80%)

Query: 14  KTRKPYTITKQRERWTEEEHNRFLEALKLHGRAWQRIEEHIGTKSAVQIRSHAQKFFTKL 73
           K RKPYTITK RE W++EEH++FLEAL+L  R W++IE+ +G+K+ +QIRSHAQK+F K+
Sbjct: 36  KVRKPYTITKSRESWSDEEHDKFLEALQLFDRDWKKIEDFVGSKTVIQIRSHAQKYFLKV 95

Query: 74  EKEALVKGVP 83
           +K   +  VP
Sbjct: 96  QKNGTLAHVP 105


>Medtr1g067000.1 | myb transcription factor | HC |
           chr1:28822118-28815959 | 20130731
          Length = 298

 Score = 98.6 bits (244), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 40/70 (57%), Positives = 56/70 (80%)

Query: 14  KTRKPYTITKQRERWTEEEHNRFLEALKLHGRAWQRIEEHIGTKSAVQIRSHAQKFFTKL 73
           K RKPYTITK RE W++EEH++FLEAL+L  R W++IE+ +G+K+ +QIRSHAQK+F K+
Sbjct: 36  KVRKPYTITKSRESWSDEEHDKFLEALQLFDRDWKKIEDFVGSKTVIQIRSHAQKYFLKV 95

Query: 74  EKEALVKGVP 83
           +K   +  VP
Sbjct: 96  QKNGTLAHVP 105


>Medtr8g028655.1 | myb transcription factor | HC |
           chr8:10999892-11006608 | 20130731
          Length = 333

 Score = 97.1 bits (240), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 40/70 (57%), Positives = 55/70 (78%)

Query: 14  KTRKPYTITKQRERWTEEEHNRFLEALKLHGRAWQRIEEHIGTKSAVQIRSHAQKFFTKL 73
           K RKPYTITK RE WT++EH++FLEAL+L  R W++IE  +G+K+ +QIRSHAQK+F K+
Sbjct: 53  KIRKPYTITKSRESWTDQEHDKFLEALQLFDRDWKKIEAFVGSKTVIQIRSHAQKYFLKV 112

Query: 74  EKEALVKGVP 83
           +K    + VP
Sbjct: 113 QKSGTSEHVP 122


>Medtr1g083180.1 | myb-like DNA-binding domain, shaqkyf class
           protein | LC | chr1:37028310-37027562 | 20130731
          Length = 186

 Score = 55.8 bits (133), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 25/69 (36%), Positives = 43/69 (62%), Gaps = 1/69 (1%)

Query: 21  ITKQRERWTEEEHNRFLEALKLHGRA-WQRIEEHIGTKSAVQIRSHAQKFFTKLEKEALV 79
           I K +  W EE+H  FLE  + +G+  W +I +H+GTK+  Q+ SHAQK F ++++ A +
Sbjct: 56  INKGQYHWDEEQHRLFLEGFEKYGKGKWIKIAQHVGTKTTTQVASHAQKHFIRIKESAKL 115

Query: 80  KGVPIGQAI 88
             +   ++I
Sbjct: 116 SKIRKRRSI 124


>Medtr5g075760.1 | myb transcription factor | LC |
           chr5:32235189-32236380 | 20130731
          Length = 216

 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 23/46 (50%), Positives = 34/46 (73%), Gaps = 1/46 (2%)

Query: 26  ERWTEEEHNRFLEALKLHGRA-WQRIEEHIGTKSAVQIRSHAQKFF 70
           + WTEEEH  FLE +++HG+  W+ I +H+ T++A Q+ SHAQK F
Sbjct: 105 KHWTEEEHRLFLEGIEIHGKGKWKLISQHVRTRTASQVASHAQKHF 150


>Medtr5g075790.1 | myb-like DNA-binding domain, shaqkyf class
           protein | LC | chr5:32247565-32248574 | 20130731
          Length = 224

 Score = 52.8 bits (125), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 25/58 (43%), Positives = 39/58 (67%), Gaps = 5/58 (8%)

Query: 14  KTRKPYTITKQRERWTEEEHNRFLEALKLHGRA-WQRIEEHIGTKSAVQIRSHAQKFF 70
           KT+K  ++    + WTEEEH  FLE +++H +  W+ I +H+ T++A Q+ SHAQK F
Sbjct: 105 KTKKVVSV----KHWTEEEHRLFLEGIEIHKKGNWKMISQHVRTRTASQVASHAQKHF 158


>Medtr5g088010.1 | MYB-like DNA-binding domain, shaqkyf class
           protein | LC | chr5:38166107-38167102 | 20130731
          Length = 249

 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 28/69 (40%), Positives = 42/69 (60%), Gaps = 6/69 (8%)

Query: 4   ADSSSEEVIVKTRKPYTITKQRERWTEEEHNRFLEALKLHGRA-WQRI-EEHIGTKSAVQ 61
           A+S  EE    +  P  + ++   WT++EH  FL+ LK HG+  W+ I +E + TK+  Q
Sbjct: 42  AESGPEE----SHPPGRVQRKSIHWTDDEHKLFLKGLKKHGKGRWKDISKEFVVTKTPTQ 97

Query: 62  IRSHAQKFF 70
           I SHAQK+F
Sbjct: 98  IASHAQKYF 106


>Medtr5g488160.1 | MYB-like DNA-binding domain, shaqkyf class
           protein | LC | chr5:38202522-38200002 | 20130731
          Length = 461

 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 24/49 (48%), Positives = 34/49 (69%), Gaps = 2/49 (4%)

Query: 24  QRERWTEEEHNRFLEALKLHGRA-WQRI-EEHIGTKSAVQIRSHAQKFF 70
           ++  WTE+EH  FL+ LK HG+  W+ I +E + TK+  QI SHAQK+F
Sbjct: 270 RKGHWTEDEHKLFLKGLKKHGKGCWKDISKEFVVTKTPTQIASHAQKYF 318


>Medtr5g088060.1 | MYB-like DNA-binding domain, shaqkyf class
           protein | LC | chr5:38175298-38172778 | 20130731
          Length = 461

 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 24/49 (48%), Positives = 34/49 (69%), Gaps = 2/49 (4%)

Query: 24  QRERWTEEEHNRFLEALKLHGRA-WQRI-EEHIGTKSAVQIRSHAQKFF 70
           ++  WTE+EH  FL+ LK HG+  W+ I +E + TK+  QI SHAQK+F
Sbjct: 270 RKGHWTEDEHKLFLKGLKKHGKGCWKDISKEFVVTKTPTQIASHAQKYF 318


>Medtr5g027550.1 | MYB-like DNA-binding domain, shaqkyf class
           protein | LC | chr5:11483100-11484869 | 20130731
          Length = 229

 Score = 50.8 bits (120), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 26/51 (50%), Positives = 33/51 (64%), Gaps = 2/51 (3%)

Query: 23  KQRERWTEEEHNRFLEALKLHGRA-WQRI-EEHIGTKSAVQIRSHAQKFFT 71
           K+R  WTE EH  FL+ +K HGR  W+ I  E + TK+  QI SHAQK+F 
Sbjct: 74  KERVHWTEGEHKLFLQGVKKHGRGRWKDISREFVKTKTPTQIASHAQKYFV 124