Miyakogusa Predicted Gene

Lj3g3v1907630.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v1907630.1 Non Characterized Hit- tr|A5AXN9|A5AXN9_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,72.22,3e-18,DDE_4,NULL,CUFF.43290.1
         (105 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g055725.1 | transmembrane protein, putative | HC | chr4:20...    55   1e-08

>Medtr4g055725.1 | transmembrane protein, putative | HC |
           chr4:20357854-20358772 | 20130731
          Length = 266

 Score = 55.1 bits (131), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 28/58 (48%), Positives = 36/58 (62%), Gaps = 2/58 (3%)

Query: 7   DMCFIFALPGWEGIAHDARVFENALTTASMNFPHPPPGKYYLVDAGYPTPVAILVHID 64
           D+ FI+ALPGWE  A D+RV ++AL     N    P GKY+LVDAGY      LV ++
Sbjct: 207 DLRFIYALPGWEESAGDSRVLKDAL--QRQNCLRIPNGKYFLVDAGYTNGHGGLVTME 262