Miyakogusa Predicted Gene

Lj3g3v0642430.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0642430.1 Non Characterized Hit- tr|C5WQL0|C5WQL0_SORBI
Putative uncharacterized protein Sb01g027630 OS=Sorghu,51.06,0.0005,
,gene.g45757.t1.1
         (60 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g009780.1 | hypothetical protein | HC | chr8:2416091-23880...    84   2e-17

>Medtr8g009780.1 | hypothetical protein | HC | chr8:2416091-2388008
           | 20130731
          Length = 2158

 Score = 84.3 bits (207), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 40/54 (74%), Positives = 45/54 (83%)

Query: 1   MLAGPFYPILHVVNERTSSRTPGNTTDLDVSKSSQLSPALTVSSNFEEKGSSGA 54
           MLAGPFYPILHV NERT+S+ PGN TD +V +SSQLSPALTVSSNFE + S  A
Sbjct: 201 MLAGPFYPILHVANERTTSKHPGNITDPEVYRSSQLSPALTVSSNFEPRRSRSA 254