Miyakogusa Predicted Gene

Lj3g3v0592200.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0592200.1 Non Characterized Hit- tr|I1LXN6|I1LXN6_SOYBN
Uncharacterized protein OS=Glycine max PE=3 SV=1,90.48,0,trpS:
tryptophan--tRNA ligase,Tryptophan-tRNA ligase; seg,NULL; no
description,Rossmann-like alpha/b,CUFF.41015.1
         (311 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g007305.2 | tryptophan-tRNA ligase | HC | chr8:1445678-145...   514   e-146
Medtr8g007305.1 | tryptophan-tRNA ligase | HC | chr8:1445678-145...   479   e-135

>Medtr8g007305.2 | tryptophan-tRNA ligase | HC |
           chr8:1445678-1452521 | 20130731
          Length = 401

 Score =  514 bits (1324), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 248/295 (84%), Positives = 261/295 (88%)

Query: 17  IPFMFTKYLQDTFKVPLVIQLTDDEKFLWKNLTIEESQRLARENAKDIIACGFDISKTFI 76
           IPFMFTKYLQ+ FKVPLVIQLTDDEKFLWKNLTIEES+RLARENAKDIIACGFD+SKTFI
Sbjct: 107 IPFMFTKYLQEAFKVPLVIQLTDDEKFLWKNLTIEESRRLARENAKDIIACGFDVSKTFI 166

Query: 77  FSDFSYVGSAFYKNMMEIAKRVTYNQAVGIFGFTGEDHIGKVXXXXXXXXXXXXXXXXXX 136
           FSDF YVG AFY+NM++I KRVTYNQ VGIFGF GEDHIGKV                  
Sbjct: 167 FSDFDYVGGAFYRNMVQIGKRVTYNQVVGIFGFIGEDHIGKVSFPPVQAAPSFPSSFPHL 226

Query: 137 XXGKEKLRCLIPCAIDQDPYFRMTRDVAPKLQYNKPALIESTFFPALQGETGKMSASDPN 196
             GK  LRCLIPCAIDQDPYFRMTRDVAPK+ YNKPALIES+FFPALQGETGKMSASDPN
Sbjct: 227 FEGKGNLRCLIPCAIDQDPYFRMTRDVAPKIGYNKPALIESSFFPALQGETGKMSASDPN 286

Query: 197 SAIYVTDSAKDIKNKVNKYAFSGGQDSIEKHRQLGANLEVDIPIKYLSFFLEDDDELEHI 256
           SAIYVTDSAKDIKNKVN+YAFSGGQDSIEKHRQLGANLEVDIPIKYLSFFLEDD ELEHI
Sbjct: 287 SAIYVTDSAKDIKNKVNRYAFSGGQDSIEKHRQLGANLEVDIPIKYLSFFLEDDAELEHI 346

Query: 257 KKEYGAGRMLTGEVKQRLVEVLTALVERHCRARAAVTEEMVDAFMAVRPLPHMFD 311
           KKEYGAGRMLTGEVKQRL++VLT +VERH  ARA VTE+MVDAFMAVRPLPHMFD
Sbjct: 347 KKEYGAGRMLTGEVKQRLIQVLTEIVERHRTARANVTEKMVDAFMAVRPLPHMFD 401


>Medtr8g007305.1 | tryptophan-tRNA ligase | HC |
           chr8:1445678-1452378 | 20130731
          Length = 386

 Score =  479 bits (1234), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 232/280 (82%), Positives = 246/280 (87%)

Query: 17  IPFMFTKYLQDTFKVPLVIQLTDDEKFLWKNLTIEESQRLARENAKDIIACGFDISKTFI 76
           IPFMFTKYLQ+ FKVPLVIQLTDDEKFLWKNLTIEES+RLARENAKDIIACGFD+SKTFI
Sbjct: 107 IPFMFTKYLQEAFKVPLVIQLTDDEKFLWKNLTIEESRRLARENAKDIIACGFDVSKTFI 166

Query: 77  FSDFSYVGSAFYKNMMEIAKRVTYNQAVGIFGFTGEDHIGKVXXXXXXXXXXXXXXXXXX 136
           FSDF YVG AFY+NM++I KRVTYNQ VGIFGF GEDHIGKV                  
Sbjct: 167 FSDFDYVGGAFYRNMVQIGKRVTYNQVVGIFGFIGEDHIGKVSFPPVQAAPSFPSSFPHL 226

Query: 137 XXGKEKLRCLIPCAIDQDPYFRMTRDVAPKLQYNKPALIESTFFPALQGETGKMSASDPN 196
             GK  LRCLIPCAIDQDPYFRMTRDVAPK+ YNKPALIES+FFPALQGETGKMSASDPN
Sbjct: 227 FEGKGNLRCLIPCAIDQDPYFRMTRDVAPKIGYNKPALIESSFFPALQGETGKMSASDPN 286

Query: 197 SAIYVTDSAKDIKNKVNKYAFSGGQDSIEKHRQLGANLEVDIPIKYLSFFLEDDDELEHI 256
           SAIYVTDSAKDIKNKVN+YAFSGGQDSIEKHRQLGANLEVDIPIKYLSFFLEDD ELEHI
Sbjct: 287 SAIYVTDSAKDIKNKVNRYAFSGGQDSIEKHRQLGANLEVDIPIKYLSFFLEDDAELEHI 346

Query: 257 KKEYGAGRMLTGEVKQRLVEVLTALVERHCRARAAVTEEM 296
           KKEYGAGRMLTGEVKQRL++VLT +VERH  ARA VTE++
Sbjct: 347 KKEYGAGRMLTGEVKQRLIQVLTEIVERHRTARANVTEKI 386