Miyakogusa Predicted Gene

Lj3g3v0577110.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0577110.1 tr|Q5YJQ9|Q5YJQ9_HYAOR Mago nashi-like protein
(Fragment) OS=Hyacinthus orientalis PE=2 SV=1,98.7,4e-38,SUBFAMILY NOT
NAMED,NULL; FAMILY NOT NAMED,Mago nashi protein; no description,Mago
nashi protein; Ma,CUFF.40987.1
         (77 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g118110.1 | mago nashi family, integral exon junction comp...   162   6e-41
Medtr3g109260.1 | mago nashi family, integral exon junction comp...   122   6e-29

>Medtr3g118110.1 | mago nashi family, integral exon junction complex
           protein | HC | chr3:55279593-55281242 | 20130731
          Length = 214

 Score =  162 bits (410), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 77/77 (100%), Positives = 77/77 (100%)

Query: 1   MKEDDNNWPEPDRVGRQELEIVMGNEHISFTTSKIGSLVDVQSSADPEGLRIFYYLVQDL 60
           MKEDDNNWPEPDRVGRQELEIVMGNEHISFTTSKIGSLVDVQSSADPEGLRIFYYLVQDL
Sbjct: 138 MKEDDNNWPEPDRVGRQELEIVMGNEHISFTTSKIGSLVDVQSSADPEGLRIFYYLVQDL 197

Query: 61  KCFVFSLISLHFKIKPI 77
           KCFVFSLISLHFKIKPI
Sbjct: 198 KCFVFSLISLHFKIKPI 214


>Medtr3g109260.1 | mago nashi family, integral exon junction complex
           protein | HC | chr3:50507371-50505423 | 20130731
          Length = 150

 Score =  122 bits (307), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 57/77 (74%), Positives = 70/77 (90%), Gaps = 3/77 (3%)

Query: 1   MKEDDNNWPEPDRVGRQELEIVMGNEHISFTTSKIGSLVDVQSSADPEGLRIFYYLVQDL 60
           MKEDD+NWPEP+RVGRQELEIVMGNEHISF T+KIG++ +V++S   EGL+ F++LVQDL
Sbjct: 75  MKEDDHNWPEPNRVGRQELEIVMGNEHISFITTKIGAVAEVENS---EGLQNFHWLVQDL 131

Query: 61  KCFVFSLISLHFKIKPI 77
           +CFV +LISLHFKIKPI
Sbjct: 132 RCFVLNLISLHFKIKPI 148