Miyakogusa Predicted Gene

Lj3g3v0429510.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0429510.1 Non Characterized Hit- tr|I3SLI5|I3SLI5_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,99.32,0,3HCDH,3-hydroxyacyl-CoA dehydrogenase, conserved site;
seg,NULL; NAD(P)-binding Rossmann-fold domain,CUFF.40770.1
         (292 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g061230.1 | 3-hydroxyacyl-CoA dehyrogenase | HC | chr8:210...   469   e-132
Medtr8g058775.1 | 3-hydroxyacyl-CoA dehyrogenase | HC | chr8:202...   469   e-132
Medtr6g087670.1 | glyoxysomal fatty acid beta-oxidation MFP-A pr...   131   8e-31
Medtr0837s0020.1 | 3-hydroxyacyl-CoA dehydrogenase NAD-binding p...   123   2e-28
Medtr4g120130.1 | glyoxysomal fatty acid beta-oxidation MFP-A pr...   114   1e-25
Medtr2g436300.1 | glyoxysomal fatty acid beta-oxidation MFP-A pr...   112   6e-25

>Medtr8g061230.1 | 3-hydroxyacyl-CoA dehyrogenase | HC |
           chr8:21056770-21061794 | 20130731
          Length = 296

 Score =  469 bits (1206), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 229/282 (81%), Positives = 243/282 (86%)

Query: 4   ATVKRIXXXXXXXXXXXIAQVAAMHGVDVCLFDVDPQALSKAXXXXXXXXXRLVSKSHLS 63
           A VK I           IAQ+ AMHG+DVCL DV+PQ LS A         RLVSKS LS
Sbjct: 2   ADVKMIGVIGGGQMGSGIAQLTAMHGIDVCLLDVNPQVLSTASSSISSSINRLVSKSQLS 61

Query: 64  QVAGADALKRLRFTSDLEEFRDADFVIEAIVESEDVKKTLFVQLDKIVKSSAILASNTSS 123
           Q   +DALKRLRFT++L +   ADF+IEAIVESE+VKK+LFVQLDKI KSSAILASNTSS
Sbjct: 62  QSTASDALKRLRFTTNLNDLSVADFIIEAIVESEEVKKSLFVQLDKIAKSSAILASNTSS 121

Query: 124 ISITRLASSTCRPSQVIGMHFMNPPPLMKLIEIVRGADTSDETFAATKALSERLGKTVIT 183
           ISITRLASST RP QVIGMHFMNPPP+MKLIEIVRGADTSD TFAATKALS+RLGKTVIT
Sbjct: 122 ISITRLASSTTRPQQVIGMHFMNPPPVMKLIEIVRGADTSDATFAATKALSQRLGKTVIT 181

Query: 184 SQDYSGFIVNRILMPMINEAFFTLYTGVATKEDIDTGMKLGTNHPMGPLELADFIGLDVC 243
           SQDYSGFIVNRILMPMINEAF+TLYT VATKEDIDTGMKLGTNHPMGPLELADFIGLDVC
Sbjct: 182 SQDYSGFIVNRILMPMINEAFYTLYTNVATKEDIDTGMKLGTNHPMGPLELADFIGLDVC 241

Query: 244 LSIMKVLHAGLGDNKYAPCPLLVQYVDAGRLGRKRGIGVYDY 285
           LSIMKVLHAGLGDNKY+PCPLLVQYVDAGRLGRKRGIGVYDY
Sbjct: 242 LSIMKVLHAGLGDNKYSPCPLLVQYVDAGRLGRKRGIGVYDY 283


>Medtr8g058775.1 | 3-hydroxyacyl-CoA dehyrogenase | HC |
           chr8:20270126-20275266 | 20130731
          Length = 296

 Score =  469 bits (1206), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 229/282 (81%), Positives = 243/282 (86%)

Query: 4   ATVKRIXXXXXXXXXXXIAQVAAMHGVDVCLFDVDPQALSKAXXXXXXXXXRLVSKSHLS 63
           A VK I           IAQ+ AMHG+DVCL DV+PQ LS A         RLVSKS LS
Sbjct: 2   ADVKMIGVIGGGQMGSGIAQLTAMHGIDVCLLDVNPQVLSTASSSISSSINRLVSKSQLS 61

Query: 64  QVAGADALKRLRFTSDLEEFRDADFVIEAIVESEDVKKTLFVQLDKIVKSSAILASNTSS 123
           Q   +DALKRLRFT++L +   ADF+IEAIVESE+VKK+LFVQLDKI KSSAILASNTSS
Sbjct: 62  QSTASDALKRLRFTTNLNDLSVADFIIEAIVESEEVKKSLFVQLDKIAKSSAILASNTSS 121

Query: 124 ISITRLASSTCRPSQVIGMHFMNPPPLMKLIEIVRGADTSDETFAATKALSERLGKTVIT 183
           ISITRLASST RP QVIGMHFMNPPP+MKLIEIVRGADTSD TFAATKALS+RLGKTVIT
Sbjct: 122 ISITRLASSTTRPQQVIGMHFMNPPPVMKLIEIVRGADTSDATFAATKALSQRLGKTVIT 181

Query: 184 SQDYSGFIVNRILMPMINEAFFTLYTGVATKEDIDTGMKLGTNHPMGPLELADFIGLDVC 243
           SQDYSGFIVNRILMPMINEAF+TLYT VATKEDIDTGMKLGTNHPMGPLELADFIGLDVC
Sbjct: 182 SQDYSGFIVNRILMPMINEAFYTLYTNVATKEDIDTGMKLGTNHPMGPLELADFIGLDVC 241

Query: 244 LSIMKVLHAGLGDNKYAPCPLLVQYVDAGRLGRKRGIGVYDY 285
           LSIMKVLHAGLGDNKY+PCPLLVQYVDAGRLGRKRGIGVYDY
Sbjct: 242 LSIMKVLHAGLGDNKYSPCPLLVQYVDAGRLGRKRGIGVYDY 283


>Medtr6g087670.1 | glyoxysomal fatty acid beta-oxidation MFP-A
           protein | HC | chr6:32981575-32974721 | 20130731
          Length = 722

 Score =  131 bits (329), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 89/271 (32%), Positives = 131/271 (48%), Gaps = 7/271 (2%)

Query: 21  IAQVAAMHGVDVCLFDVDPQALSKAXXXXXXXXXRLVSKSHLSQVAGADALKRLRFTSDL 80
           IA    +  + V L +V+ + L K           LV++  L+Q     AL  L+   D 
Sbjct: 321 IATALILGNIRVILKEVNSEYLQKGIKTIEANVRGLVTRKKLTQQKAEGALSLLKGVLDY 380

Query: 81  EEFRDADFVIEAIVESEDVKKTLFVQLDKIVKSSAILASNTSSISITRLASSTCRPSQVI 140
            EF+D D VIEA++E   +K+ +F  L+KI     ILASNTS+I +  +        +VI
Sbjct: 381 AEFKDVDMVIEAVIEKVSLKQDIFSDLEKICPPHCILASNTSTIDLNIIGEKISSQDRVI 440

Query: 141 GMHFMNPPPLMKLIEIVRGADTSDETFAATKALSERLGKTVITSQDYSGFIVNRILMPMI 200
           G HF +P  +M L+EIVR   TS +       + + + K+ +   + +GF VNR   P  
Sbjct: 441 GAHFFSPAHIMPLLEIVRTNKTSAQVILDLVTVGKIIKKSPVVVGNCTGFAVNRTFFPYA 500

Query: 201 NEAFFTLYTGVATKEDIDTGMKLGTNH--PMGPLELADFIGLDVCLSIMKVLHAGLGDNK 258
             A F    GV    D+    +L +N   PMGP +L D  G  V +++ K   AG    +
Sbjct: 501 QGAHFLANLGV----DVFRIDRLISNFGLPMGPFQLQDLSGYGVAVAVGKEF-AGSFAGR 555

Query: 259 YAPCPLLVQYVDAGRLGRKRGIGVYDYLKSS 289
             P PLL   + +GR G+  G G Y Y K S
Sbjct: 556 TFPTPLLDLLIKSGRNGKNNGKGYYIYEKGS 586


>Medtr0837s0020.1 | 3-hydroxyacyl-CoA dehydrogenase NAD-binding
           protein, putative | LC | scaffold0837:2078-5260 |
           20130731
          Length = 962

 Score =  123 bits (309), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 76/217 (35%), Positives = 115/217 (52%), Gaps = 10/217 (4%)

Query: 73  RLRFTSDLEEFRDADFVIEAIVESEDVKKTLFVQLDKIVKSSAILASNTSSISITRLASS 132
           RL     L +  + D V+EA+VES +VK  +F  +D+ +K  AILA+NTS ++I +LA++
Sbjct: 497 RLDVLPALSDLAEVDLVVEAVVESMEVKIEVFRMVDQHLKHGAILATNTSMLNIDQLAAA 556

Query: 133 TCRPSQVIGMHFMNPPPLMKLIEIVRGADTSDETFAATKALSERLGKTVITSQDYSGFIV 192
           T R   VIG+HF  P P+M+L+E+VR A TSD T A   +L+ ++ K  + ++   GFI 
Sbjct: 557 TSRAQDVIGLHFFGPAPVMRLLEVVRAARTSDSTLATAMSLARQIKKVPVVAKVSPGFIG 616

Query: 193 NRILMPMINEAFFTLYTGVATKEDIDTGMKLGTNHPMGPLELADFIGLDVCLSIMKVLHA 252
           NRI    +  A   +  GV   + +D  ++  T   MGP    D IG D+    +    A
Sbjct: 617 NRIFNRFLEAALELMARGV-RPDHVDCALE-KTGMRMGPFRTMDLIGNDILAKALDSHGA 674

Query: 253 GLGDNKYAPCPLLVQYVDAGRLGRKRGIGVYDYLKSS 289
           G+G         L +     R G K  +G Y Y +S 
Sbjct: 675 GVGQ--------LHRLAAQKRFGVKTRLGWYRYDESG 703


>Medtr4g120130.1 | glyoxysomal fatty acid beta-oxidation MFP-A
           protein | HC | chr4:49803884-49795592 | 20130731
          Length = 723

 Score =  114 bits (285), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 81/287 (28%), Positives = 127/287 (44%), Gaps = 5/287 (1%)

Query: 6   VKRIXXXXXXXXXXXIAQVAAMHGVDVCLFDVDPQALSKAXXXXXXXXXRLVSKSHLSQV 65
           VK++           IA    +    V L +V+ + L              V K +L+Q 
Sbjct: 310 VKKVAILGGGLMGSGIATALILSNYSVILKEVNEKFLDAGINRIKANLQSRVKKGNLTQE 369

Query: 66  AGADALKRLRFTSDLEEFRDADFVIEAIVESEDVKKTLFVQLDKIVKSSAILASNTSSIS 125
               A   ++ + D + FRD D VIEA++E+  +K+ +F  L+K      IL SNTS+I 
Sbjct: 370 RFEKAFSLVKGSLDYDSFRDVDMVIEAVIENVSLKQQIFADLEKYCPPHCILGSNTSTID 429

Query: 126 ITRLASSTCRPSQVIGMHFMNPPPLMKLIEIVRGADTSDETFAATKALSERLGKTVITSQ 185
           +  +   T    ++IG HF +P  +M L+EIVR   TS +       +S+++ KT +   
Sbjct: 430 LDLIGEKTKSQDRIIGAHFFSPAHVMPLLEIVRTKRTSPQVIVDLLDISKKIKKTPVVVG 489

Query: 186 DYSGFIVNRILMPMINEAFFTLYTGVATKEDIDTGMKLGTNHPMGPLELADFIGLDVCLS 245
           + +GF VNR+  P        +  G    +      K G   PMGPL L D +G  V ++
Sbjct: 490 NCTGFAVNRVFFPYTQATLLLVERGADVYQIDKAVTKFGM--PMGPLRLCDLVGFGVAVA 547

Query: 246 IMKVLHAGLGDNKYAP--CPLLVQYVDAGRLGRKRGIGVYDYLKSSS 290
                     +  Y     PLL +   AG   RK G  +YD  + +S
Sbjct: 548 TGSQFVQNFPERTYKSMLIPLLQEDKRAGETTRK-GFYLYDDRRKAS 593


>Medtr2g436300.1 | glyoxysomal fatty acid beta-oxidation MFP-A
           protein | HC | chr2:14109767-14119095 | 20130731
          Length = 721

 Score =  112 bits (279), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 78/281 (27%), Positives = 124/281 (44%), Gaps = 5/281 (1%)

Query: 6   VKRIXXXXXXXXXXXIAQVAAMHGVDVCLFDVDPQALSKAXXXXXXXXXRLVSKSHLSQV 65
           VK++           IA    +    V L +V+ + L              V K  +++ 
Sbjct: 308 VKKVAILGGGLMGSGIATALILSNYPVILKEVNEKFLEAGVNRVKANLQSRVKKGQMTKE 367

Query: 66  AGADALKRLRFTSDLEEFRDADFVIEAIVESEDVKKTLFVQLDKIVKSSAILASNTSSIS 125
                +  L+ T D E F+D D VIEA++E+  +K+ +F  L+K      ILASNTS+I 
Sbjct: 368 KFEKTISLLKGTIDYESFKDVDLVIEAVIENVVLKQQIFADLEKYCPPHCILASNTSTID 427

Query: 126 ITRLASSTCRPSQVIGMHFMNPPPLMKLIEIVRGADTSDETFAATKALSERLGKTVITSQ 185
           +  +  +T    +++G HF +P  +M L+EIVR   TS +       +  ++ KT +   
Sbjct: 428 LNLIGKNTKSEDRIVGAHFFSPAHVMPLLEIVRTKQTSPQIVVDLLDIGRKIRKTPVVVG 487

Query: 186 DYSGFIVNRILMPMINEAFFTLYTGVATKEDIDTGMKLGTNHPMGPLELADFIGLDVCLS 245
           + +GF VNR+  P    A F +  G    +      K G   PMGP  L D +G  V ++
Sbjct: 488 NCTGFAVNRMFFPYTQAAMFLIEHGADVYQIDKAVTKFGM--PMGPFRLIDLVGFGVGVA 545

Query: 246 IMKVLHAGLGDNKYAP--CPLLVQYVDAGRLGRKRGIGVYD 284
                     +  Y     PL+ +   AG   RK G  +YD
Sbjct: 546 TAMQFIENFPERTYKSMILPLMQEDKRAGEATRK-GFYLYD 585