Miyakogusa Predicted Gene

Lj3g3v0420540.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0420540.1 Non Characterized Hit- tr|I3S3W0|I3S3W0_MEDTR
Uncharacterized protein OS=Medicago truncatula PE=2
SV,50,3e-19,UBIQUINONE/MENAQUINONE BIOSYNTHESIS
METHYLTRANSFERASE,NULL; METHYLTRANSFERASE,NULL; seg,NULL;
S-aden,gene.g45262.t1.1
         (199 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g104740.1 | coclaurine N-methyltransferase | HC | chr3:482...   171   3e-43

>Medtr3g104740.1 | coclaurine N-methyltransferase | HC |
           chr3:48287469-48284833 | 20130731
          Length = 358

 Score =  171 bits (434), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 76/85 (89%), Positives = 82/85 (96%)

Query: 115 FEDDVTVINHWLLNGKHYAQTSEEWLKIMDKNMSSIKPIMESTYGKDSAIQWTVYWRTYF 174
           F+DDVTVINHWL+NGKHYAQTSEEWLK MDKN +SIKPIMESTYGKDSA +WTVYWRT+F
Sbjct: 274 FQDDVTVINHWLVNGKHYAQTSEEWLKRMDKNKTSIKPIMESTYGKDSATKWTVYWRTFF 333

Query: 175 IAIAELFGYNNGEEWMVAHFLFKKK 199
           IA+AELFGYNNGEEWMVAHFLFKKK
Sbjct: 334 IAVAELFGYNNGEEWMVAHFLFKKK 358



 Score = 88.6 bits (218), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 52/112 (46%), Positives = 57/112 (50%), Gaps = 16/112 (14%)

Query: 1   MENALQLLYNTGVKLMLTSLERNLLPDAVIXX----------------XXXXXXXXXXXX 44
           ME  + L YNT VKLML SLERNLLPD VI                              
Sbjct: 4   MEEMMHLPYNTTVKLMLGSLERNLLPDTVIRRLTRLLLSTRLRSSYKPSSELQLSDLLQF 63

Query: 45  XXXXQDMPIAVSTNKAKSQHYELPTSFFRLVLGKNLKYRDLQLQNLDIIVAD 96
               QDMPIAVST+  KSQHYELPTSFF+LVLG NLKY      +    + D
Sbjct: 64  AHSLQDMPIAVSTDVPKSQHYELPTSFFKLVLGNNLKYSSCYFSSASKTLED 115



 Score = 66.2 bits (160), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 31/36 (86%), Positives = 34/36 (94%)

Query: 81  KYRDLQLQNLDIIVADISTFEMEASYDRIYSIGMFE 116
           K R+LQLQN+DIIVADISTFEMEASYDRI+SI MFE
Sbjct: 175 KCRELQLQNVDIIVADISTFEMEASYDRIFSIEMFE 210