Miyakogusa Predicted Gene

Lj3g3v0044250.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0044250.1 Non Characterized Hit- tr|I1KGZ4|I1KGZ4_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.39705
PE,63.91,0,Ribonuclease H-like,Ribonuclease H-like domain; C2H2 and
C2HC zinc fingers,NULL; SUBFAMILY NOT NAMED,CUFF.40235.1
         (680 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g036325.1 | hypothetical protein | LC | chr4:13081348-1308...    68   2e-11

>Medtr4g036325.1 | hypothetical protein | LC |
           chr4:13081348-13082899 | 20130731
          Length = 204

 Score = 68.2 bits (165), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 36/98 (36%), Positives = 56/98 (57%), Gaps = 2/98 (2%)

Query: 110 MIILHDYP-LHIVEHRGFIDFARALQPQFNPLSLNAVQEDCVAIYLRKKQNLLKLIDGIP 168
           MII+H+YP L IV+H GF  ++  LQ  F   S N V+ D + IY  +K   + L+D I 
Sbjct: 1   MIIIHEYPPLSIVDHLGFRAYSEGLQHLFKVPSRNTVKSDIIKIYENEKLKTMGLLDKIE 60

Query: 169 GRVNLTLDLWT-SDQTSAYVFLRGHFVDCDWNLHHPIL 205
            ++ LT  + T S+Q   Y+ +  H++  DW++   IL
Sbjct: 61  SKIALTSYMLTASNQKKGYMVITAHYISDDWSMQSRIL 98