Miyakogusa Predicted Gene

Lj2g3v3106290.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v3106290.1 Non Characterized Hit- tr|G7K3C4|G7K3C4_MEDTR
Putative uncharacterized protein OS=Medicago truncatul,92,5e-19,
,CUFF.39718.1
         (48 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g091630.1 | AT hook motif DNA-binding family protein | HC ...    99   1e-21

>Medtr5g091630.1 | AT hook motif DNA-binding family protein | HC |
           chr5:39959479-39960243 | 20130731
          Length = 254

 Score = 98.6 bits (244), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 46/50 (92%), Positives = 48/50 (96%), Gaps = 2/50 (4%)

Query: 1   MQNQHYQNGRA--HHLDISDLYAMPQNLLMNGAMPPEIYAWAPGRNLSKS 48
           MQNQHYQNGRA  HHLDISDLYAMPQNLLMNGAMPPEIY+WAPGRNLSK+
Sbjct: 205 MQNQHYQNGRAAQHHLDISDLYAMPQNLLMNGAMPPEIYSWAPGRNLSKT 254