Miyakogusa Predicted Gene

Lj2g3v3088160.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v3088160.1 tr|B9GFL3|B9GFL3_POPTR Outward rectifying
potassium channel (Fragment) OS=Populus trichocarpa
GN=POP,38.46,3e-19,Voltage-gated potassium channels,NULL; seg,NULL;
Ion_trans_2,Ion transport 2; PROBABLE CALCIUM-ACTIV,gene.g44177.t1.1
         (150 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g091565.1 | outward rectifying potassium channel protein |...   172   1e-43
Medtr4g094582.1 | outward rectifying potassium channel protein |...   145   1e-35
Medtr7g110600.1 | outward rectifying potassium channel protein |...   132   1e-31
Medtr4g133870.1 | outward rectifying potassium channel protein |...   104   3e-23
Medtr5g095650.2 | outward rectifying potassium channel protein |...    90   6e-19
Medtr5g095650.1 | outward rectifying potassium channel protein |...    90   6e-19

>Medtr5g091565.1 | outward rectifying potassium channel protein | HC
           | chr5:39924920-39923156 | 20130731
          Length = 383

 Score =  172 bits (436), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 92/127 (72%), Positives = 108/127 (85%), Gaps = 3/127 (2%)

Query: 1   MRIRTKVCLALAVVIGRVAIGTVASHFVGDLDWADSLYLSVTSVTTVGYGDYSLTTVAGR 60
           MRIRTKVC+AL VVI  +AIGTV +HFV +L+WADS YLS+TSVTTVGYGDYS  T+ GR
Sbjct: 218 MRIRTKVCVALVVVIVCIAIGTVTAHFVENLNWADSFYLSITSVTTVGYGDYSFRTLTGR 277

Query: 61  CFASLWLLVSTLAVARAYLYLADYNMQKRNREMAKWILQKKITLSDLIAADLDNDGSIRF 120
           CFA LWLLVST +V+RA++YL DY+MQKR+R+MAK +LQKKITLSDL AADLDNDGSI  
Sbjct: 278 CFAILWLLVSTFSVSRAFIYLTDYSMQKRSRKMAKMVLQKKITLSDLAAADLDNDGSI-- 335

Query: 121 EEKMNFV 127
             K +FV
Sbjct: 336 -SKSDFV 341


>Medtr4g094582.1 | outward rectifying potassium channel protein | HC
           | chr4:38278110-38286225 | 20130731
          Length = 418

 Score =  145 bits (367), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 70/122 (57%), Positives = 91/122 (74%)

Query: 1   MRIRTKVCLALAVVIGRVAIGTVASHFVGDLDWADSLYLSVTSVTTVGYGDYSLTTVAGR 60
           MRIR KV LAL VV+  + +G    HFV  L W DS YLSV SVTTVGYGD++  T+ GR
Sbjct: 252 MRIRMKVALALGVVVLCIGLGVTVMHFVERLGWVDSFYLSVMSVTTVGYGDHAFKTLHGR 311

Query: 61  CFASLWLLVSTLAVARAYLYLADYNMQKRNREMAKWILQKKITLSDLIAADLDNDGSIRF 120
            FA++WLLVSTLAVARA+LYLA+  + KR+R MAKWIL + +T+++ +AAD+DN+G +  
Sbjct: 312 IFAAIWLLVSTLAVARAFLYLAEARVDKRHRRMAKWILGQDMTVAEFLAADMDNNGFVSK 371

Query: 121 EE 122
            E
Sbjct: 372 SE 373


>Medtr7g110600.1 | outward rectifying potassium channel protein | HC
           | chr7:45328955-45326338 | 20130731
          Length = 382

 Score =  132 bits (332), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 66/126 (52%), Positives = 91/126 (72%)

Query: 1   MRIRTKVCLALAVVIGRVAIGTVASHFVGDLDWADSLYLSVTSVTTVGYGDYSLTTVAGR 60
           MRIR KV LAL VV+  + +G++   FV  LDW DS+YL+V SVTTVGYGD +  T+ GR
Sbjct: 216 MRIRLKVGLALGVVVLCIGVGSLVLCFVEGLDWVDSIYLAVMSVTTVGYGDRAFKTLPGR 275

Query: 61  CFASLWLLVSTLAVARAYLYLADYNMQKRNREMAKWILQKKITLSDLIAADLDNDGSIRF 120
            FA++WLL STL VARA+LYLA+  + +R+R +AK +L ++IT+ D +AAD++N G I  
Sbjct: 276 LFAAIWLLFSTLMVARAFLYLAEARIDRRHRRLAKKVLHREITIEDWLAADINNTGFISK 335

Query: 121 EEKMNF 126
            E + F
Sbjct: 336 SEYVIF 341


>Medtr4g133870.1 | outward rectifying potassium channel protein | HC
           | chr4:55993276-55996041 | 20130731
          Length = 353

 Score =  104 bits (260), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 51/117 (43%), Positives = 79/117 (67%)

Query: 2   RIRTKVCLALAVVIGRVAIGTVASHFVGDLDWADSLYLSVTSVTTVGYGDYSLTTVAGRC 61
           + + K  LA+A     +  GTV  +F+ +LD+ D+LY   ++VTT+GYGD S +T AGR 
Sbjct: 187 KSKYKFVLAVATFFVLMIAGTVFLYFIENLDFVDALYCVCSTVTTLGYGDKSFSTAAGRI 246

Query: 62  FASLWLLVSTLAVARAYLYLADYNMQKRNREMAKWILQKKITLSDLIAADLDNDGSI 118
           FA  W+L ST+ +A+++ YLA+   + R R +AK +L +K++LSDL AADLD D ++
Sbjct: 247 FAVFWILSSTICLAQSFAYLAELYTEDRQRSLAKMVLTRKLSLSDLEAADLDGDKAV 303


>Medtr5g095650.2 | outward rectifying potassium channel protein | HC
           | chr5:41807536-41811170 | 20130731
          Length = 349

 Score = 90.1 bits (222), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 41/98 (41%), Positives = 64/98 (65%)

Query: 21  GTVASHFVGDLDWADSLYLSVTSVTTVGYGDYSLTTVAGRCFASLWLLVSTLAVARAYLY 80
           GT+    V  L+  D+ Y   +++TT+GYGD S +T AGR FA  W+L  T+ +A+ +LY
Sbjct: 202 GTIFLVNVEKLEVIDAFYCVCSTITTLGYGDKSFSTQAGRIFAVFWILTGTICLAQFFLY 261

Query: 81  LADYNMQKRNREMAKWILQKKITLSDLIAADLDNDGSI 118
           +A+ N + R + +  W+L +K+T  DL AADLD DG++
Sbjct: 262 MAELNTESRQKALVNWVLTRKMTNYDLEAADLDEDGTV 299


>Medtr5g095650.1 | outward rectifying potassium channel protein | HC
           | chr5:41807536-41811156 | 20130731
          Length = 349

 Score = 90.1 bits (222), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 41/98 (41%), Positives = 64/98 (65%)

Query: 21  GTVASHFVGDLDWADSLYLSVTSVTTVGYGDYSLTTVAGRCFASLWLLVSTLAVARAYLY 80
           GT+    V  L+  D+ Y   +++TT+GYGD S +T AGR FA  W+L  T+ +A+ +LY
Sbjct: 202 GTIFLVNVEKLEVIDAFYCVCSTITTLGYGDKSFSTQAGRIFAVFWILTGTICLAQFFLY 261

Query: 81  LADYNMQKRNREMAKWILQKKITLSDLIAADLDNDGSI 118
           +A+ N + R + +  W+L +K+T  DL AADLD DG++
Sbjct: 262 MAELNTESRQKALVNWVLTRKMTNYDLEAADLDEDGTV 299