Miyakogusa Predicted Gene

Lj2g3v2879520.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v2879520.1 Non Characterized Hit- tr|F4P7H6|F4P7H6_BATDJ
Putative uncharacterized protein OS=Batrachochytrium
d,51.52,2e-19,Rad60-SLD,Small ubiquitin-related modifier, SUMO; no
description,NULL; Ubiquitin homologues,Ubiquiti,CUFF.39400.1
         (103 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g053520.1 | small ubiquitin-like modifier 3 | HC | chr3:21...   167   2e-42
Medtr3g053540.1 | small ubiquitin-like modifier 3 | HC | chr3:21...   167   3e-42
Medtr8g010480.1 | small ubiquitin-like modifier 3 | LC | chr8:27...    98   1e-21
Medtr8g010490.1 | small ubiquitin-like modifier 3 | LC | chr8:27...    92   1e-19
Medtr8g085320.1 | ubiquitin-like Rad60 SUMO-like protein | HC | ...    77   4e-15
Medtr3g053640.1 | Myb/SANT-like DNA-binding domain protein | LC ...    70   3e-13
Medtr8g085340.1 | ubiquitin-like Rad60 SUMO-like protein | LC | ...    70   4e-13
Medtr0007s0030.1 | ubiquitin-like Rad60 SUMO-like protein | LC |...    61   3e-10
Medtr8g010470.1 | hypothetical protein | LC | chr8:2720420-27189...    50   5e-07

>Medtr3g053520.1 | small ubiquitin-like modifier 3 | HC |
          chr3:21271713-21269094 | 20130731
          Length = 101

 Score =  167 bits (423), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 80/91 (87%), Positives = 85/91 (93%), Gaps = 2/91 (2%)

Query: 8  SEEEKKPNDQSAAPHINLKVKGQDGNEVFFRIKRNTQLKKLMNAYCDRQSVELNSIAFLF 67
          +EE+KKP  ++   HINLKVKGQDGNEVFFRIKRNTQLKKLMNAYCDRQSV+ NSIAFLF
Sbjct: 10 NEEDKKP--EAGGAHINLKVKGQDGNEVFFRIKRNTQLKKLMNAYCDRQSVDFNSIAFLF 67

Query: 68 DGRRLRAEQTPDELEMEDGDEIDAMLHQTGG 98
          DGRRLRAEQTPDELEMEDGDEIDAMLHQTGG
Sbjct: 68 DGRRLRAEQTPDELEMEDGDEIDAMLHQTGG 98


>Medtr3g053540.1 | small ubiquitin-like modifier 3 | HC |
          chr3:21293436-21291225 | 20130731
          Length = 101

 Score =  167 bits (422), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 79/91 (86%), Positives = 85/91 (93%), Gaps = 2/91 (2%)

Query: 8  SEEEKKPNDQSAAPHINLKVKGQDGNEVFFRIKRNTQLKKLMNAYCDRQSVELNSIAFLF 67
          +EE+KKP  ++   HINLKVKGQDGNEVFFRIKRNTQLKKLMNAYCDRQSV+ N+IAFLF
Sbjct: 10 TEEDKKP--EAGGAHINLKVKGQDGNEVFFRIKRNTQLKKLMNAYCDRQSVDFNAIAFLF 67

Query: 68 DGRRLRAEQTPDELEMEDGDEIDAMLHQTGG 98
          DGRRLRAEQTPDELEMEDGDEIDAMLHQTGG
Sbjct: 68 DGRRLRAEQTPDELEMEDGDEIDAMLHQTGG 98


>Medtr8g010480.1 | small ubiquitin-like modifier 3 | LC |
           chr8:2725287-2721462 | 20130731
          Length = 319

 Score = 98.2 bits (243), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 42/72 (58%), Positives = 58/72 (80%)

Query: 23  INLKVKGQDGNEVFFRIKRNTQLKKLMNAYCDRQSVELNSIAFLFDGRRLRAEQTPDELE 82
           + LKVK QDGNE+FF I ++T LKKLMNAYC+  SV+ NSI F+F+   ++AEQ+P+E++
Sbjct: 167 MKLKVKCQDGNEIFFSINKSTHLKKLMNAYCNHHSVDFNSIGFMFNEHHVQAEQSPNEMQ 226

Query: 83  MEDGDEIDAMLH 94
           M DGDEIDA+ +
Sbjct: 227 MVDGDEIDAIFY 238



 Score = 89.4 bits (220), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 44/80 (55%), Positives = 58/80 (72%), Gaps = 2/80 (2%)

Query: 16  DQSAAPHINL--KVKGQDGNEVFFRIKRNTQLKKLMNAYCDRQSVELNSIAFLFDGRRLR 73
           DQSA   +NL   +K +DG EV+F I R+T LKKLM+ Y  R  +++N +AFLF+GR + 
Sbjct: 81  DQSAHIKLNLDLNIKDKDGIEVYFNISRSTPLKKLMDFYGYRHCLDINGVAFLFNGRLVT 140

Query: 74  AEQTPDELEMEDGDEIDAML 93
           AEQTPDEL+M DGDEID + 
Sbjct: 141 AEQTPDELQMMDGDEIDVVF 160



 Score = 86.3 bits (212), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 42/71 (59%), Positives = 53/71 (74%)

Query: 23  INLKVKGQDGNEVFFRIKRNTQLKKLMNAYCDRQSVELNSIAFLFDGRRLRAEQTPDELE 82
           INLKVKGQ G E  F I R+T+LKKLM+ YC R   + + +AFLF+G  + +EQTPDEL 
Sbjct: 244 INLKVKGQVGFEASFGINRSTRLKKLMDVYCCRYCFDFDGVAFLFNGCLVESEQTPDELG 303

Query: 83  MEDGDEIDAML 93
           ME+GDE+ AML
Sbjct: 304 MENGDEMLAML 314



 Score = 68.6 bits (166), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 37/81 (45%), Positives = 49/81 (60%), Gaps = 3/81 (3%)

Query: 23  INLKVKGQDGNEVFFRIKRNTQLKKLMNAYCDRQSVE-LNSIAFLFDGRRLRAEQTPDEL 81
           I LK+ GQDGN     I R+TQLKKL+  YCD+ SVE   SI F FDG  L+ +  PDE+
Sbjct: 10  IRLKLNGQDGNVTLVCIDRSTQLKKLVKDYCDQHSVEDPTSITFWFDGNGLQGDHCPDEM 69

Query: 82  EMEDGDEIDAMLHQTGGGAQL 102
            M+  DE+D + +      +L
Sbjct: 70  HMD--DEMDTISYDQSAHIKL 88


>Medtr8g010490.1 | small ubiquitin-like modifier 3 | LC |
           chr8:2738631-2736144 | 20130731
          Length = 188

 Score = 91.7 bits (226), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 40/92 (43%), Positives = 62/92 (67%)

Query: 4   TPKASEEEKKPNDQSAAPHINLKVKGQDGNEVFFRIKRNTQLKKLMNAYCDRQSVELNSI 63
           TP     + +  +     +INL VK  D  +++FR+K+ TQ++KLM++YCDR +++   +
Sbjct: 10  TPSVITNDVEEIEPQPTNYINLHVKDTDDIKLYFRLKKTTQMRKLMDSYCDRNALDFYLM 69

Query: 64  AFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQ 95
            FLF+GRR+   QTP EL++ED D IDA+LHQ
Sbjct: 70  VFLFNGRRIYPHQTPYELDLEDDDAIDAVLHQ 101



 Score = 85.5 bits (210), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 40/79 (50%), Positives = 57/79 (72%)

Query: 23  INLKVKGQDGNEVFFRIKRNTQLKKLMNAYCDRQSVELNSIAFLFDGRRLRAEQTPDELE 82
           IN+KVKGQDG +  FRI+++  LKKLM+ YC +  +++N +  LF+G  ++ EQTP EL 
Sbjct: 108 INIKVKGQDGFQASFRIRKSAALKKLMDQYCYQYCLDVNGVGLLFNGYLVQPEQTPFELG 167

Query: 83  MEDGDEIDAMLHQTGGGAQ 101
           +EDGDE+ AMLH   G A+
Sbjct: 168 IEDGDEMLAMLHLRTGHAR 186


>Medtr8g085320.1 | ubiquitin-like Rad60 SUMO-like protein | HC |
           chr8:35344880-35341163 | 20130731
          Length = 104

 Score = 76.6 bits (187), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 38/99 (38%), Positives = 60/99 (60%), Gaps = 3/99 (3%)

Query: 2   SGTPKASEEEKKPNDQSAAPHINLKVKGQDGNEVFFRIKRNTQLKKLMNAYCDRQSVELN 61
           +G  KASE ++  +D S    IN  ++ QDG+ VFF++  +  LK     YC + ++E  
Sbjct: 4   NGKRKASERDEISSDDSV--RINFSIRAQDGSRVFFKVNPDRYLKIPFKKYCQKSNLEYE 61

Query: 62  SIAFLFDGRRLRA-EQTPDELEMEDGDEIDAMLHQTGGG 99
           ++ FL +G+R+    QTP  L++++G EID M  QTGGG
Sbjct: 62  TVTFLLEGKRINGNRQTPRTLKLKNGAEIDVMKQQTGGG 100


>Medtr3g053640.1 | Myb/SANT-like DNA-binding domain protein | LC |
          chr3:21330948-21326800 | 20130731
          Length = 433

 Score = 70.5 bits (171), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 34/64 (53%), Positives = 42/64 (65%)

Query: 29 GQDGNEVFFRIKRNTQLKKLMNAYCDRQSVELNSIAFLFDGRRLRAEQTPDELEMEDGDE 88
          G+DGNE  ++  RNTQL+KLM+ Y D  S E   + F  DGRRL   QTP+ELE+ DGD 
Sbjct: 15 GRDGNEFIYKGNRNTQLRKLMDDYSDHISTEHELVNFFVDGRRLHEWQTPNELELMDGDI 74

Query: 89 IDAM 92
          I  M
Sbjct: 75 IHTM 78



 Score = 68.6 bits (166), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 33/67 (49%), Positives = 45/67 (67%)

Query: 23  INLKVKGQDGNEVFFRIKRNTQLKKLMNAYCDRQSVELNSIAFLFDGRRLRAEQTPDELE 82
           I L VKGQDG E  F +   ++L+KLM+ YC R  +++  + FLF+GR +RA+QTP EL 
Sbjct: 85  IVLNVKGQDGYEASFTMDECSRLEKLMDFYCRRYCLDITEVVFLFNGRLIRADQTPAELH 144

Query: 83  MEDGDEI 89
           M   DEI
Sbjct: 145 MRYDDEI 151


>Medtr8g085340.1 | ubiquitin-like Rad60 SUMO-like protein | LC |
           chr8:35354791-35353457 | 20130731
          Length = 131

 Score = 70.1 bits (170), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 36/96 (37%), Positives = 55/96 (57%), Gaps = 3/96 (3%)

Query: 6   KASEEEKKPNDQSAAPHINLKVKGQDGNEVFFRIKRNTQLKKLMNAYCDRQSVELNSIAF 65
           KASE ++   D     HI   ++GQDGNE  F++ ++  L      YC +  ++  +I F
Sbjct: 12  KASERDEVTED--GIVHIEFGIRGQDGNEQHFKVNQDKFLITAFQQYCKKMKLQYATINF 69

Query: 66  LFDGRRLRA-EQTPDELEMEDGDEIDAMLHQTGGGA 100
           L D + ++   QTP  L +++GD IDAM HQ+GGG 
Sbjct: 70  LLDEKSIQGNRQTPKMLNLKNGDTIDAMKHQSGGGV 105


>Medtr0007s0030.1 | ubiquitin-like Rad60 SUMO-like protein | LC |
          scaffold0007:9998-11329 | 20130731
          Length = 53

 Score = 60.8 bits (146), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 24/39 (61%), Positives = 30/39 (76%)

Query: 48 LMNAYCDRQSVELNSIAFLFDGRRLRAEQTPDELEMEDG 86
          +MN YCDR SV+ NS+ FLFDGR++R EQTPDE+    G
Sbjct: 1  MMNLYCDRTSVDFNSVVFLFDGRKIRDEQTPDEVAFHMG 39


>Medtr8g010470.1 | hypothetical protein | LC | chr8:2720420-2718944
           | 20130731
          Length = 155

 Score = 49.7 bits (117), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 24/67 (35%), Positives = 39/67 (58%), Gaps = 3/67 (4%)

Query: 39  IKRNTQLKKLMNAYCDRQSVELNSIAFLFDGRRLRAEQTPDELEMEDGD--EIDAMLHQT 96
           I  +T+LKK M+ YC R   + +S+ FLF+GR ++ E+TP+++  E+G     D    Q 
Sbjct: 68  INSDTRLKKFMDVYCCRYGFDFDSVTFLFNGRLVKLEKTPNDMS-ENGKSPSYDNFYRQF 126

Query: 97  GGGAQLA 103
           G   +L 
Sbjct: 127 GCNRKLV 133