Miyakogusa Predicted Gene

Lj2g3v1574140.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1574140.1 Non Characterized Hit- tr|B9SRA4|B9SRA4_RICCO
Putative uncharacterized protein OS=Ricinus communis
G,43.75,0.00000000002,seg,NULL,CUFF.37510.1
         (144 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g024910.1 | hypothetical protein | HC | chr5:10072583-1007...    77   4e-15
Medtr8g072610.1 | hypothetical protein | HC | chr8:30696151-3069...    60   8e-10

>Medtr5g024910.1 | hypothetical protein | HC |
           chr5:10072583-10071716 | 20130731
          Length = 149

 Score = 77.4 bits (189), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 55/130 (42%), Positives = 60/130 (46%), Gaps = 6/130 (4%)

Query: 1   MDHMSYNRVXXXXXXXXXXC---HGKCRGFRLNXXXXXXXXXXXXXXXXXXXXDMLKLSH 57
           M+ MSYNRV              HGKCRGFRLN                    D LKLSH
Sbjct: 1   MNQMSYNRVSSTSSSSGRGSSFYHGKCRGFRLNLTRLYFSRLRKRVNFFLRIFDKLKLSH 60

Query: 58  AQVLHVLKKVFCFRXXXXXXXXXXXXXXXXXXXXXXNKGQFDSSRVSSFERNNTFNAEAI 117
            Q   +LKKVFC +                       KGQ D  R SS+ RNN+F AEAI
Sbjct: 61  VQGFQLLKKVFCRKSGFKRNNSNSSRNGLMKDERI--KGQGDC-RFSSYGRNNSFYAEAI 117

Query: 118 ADCLEFIKRT 127
           ADCLEFIKRT
Sbjct: 118 ADCLEFIKRT 127


>Medtr8g072610.1 | hypothetical protein | HC |
           chr8:30696151-30697022 | 20130731
          Length = 125

 Score = 59.7 bits (143), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 46/128 (35%), Positives = 57/128 (44%), Gaps = 15/128 (11%)

Query: 1   MDHMSYNRVXXXXXXXXXXCHGKCRGFRLNXXXXXXXXXXXXXXXXXXXXDMLKLSHAQV 60
           M HMSYNRV           +G  +GFRLN                    + LKLS+   
Sbjct: 1   MGHMSYNRV----------SNGSNKGFRLNPRKFYVLRLRKRFNFFLRLFNNLKLSYGDA 50

Query: 61  LHVLKKVFCFRXXXXXXXXXXXXXXXXXXXXXXNKGQFDSSRV-SSFERNNTFNAEAIAD 119
           L +LKKVFC +                       KG  D  ++ SS+ R+N+F AEAI D
Sbjct: 51  LQMLKKVFCRKIGFKRNNSSRRSLVRDEEV----KGHDDYWKMRSSYGRSNSFYAEAIED 106

Query: 120 CLEFIKRT 127
           CLEFIKRT
Sbjct: 107 CLEFIKRT 114