Miyakogusa Predicted Gene

Lj2g3v1550140.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1550140.1 Non Characterized Hit- tr|F6HJ40|F6HJ40_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,44.83,0.0006,seg,NULL,CUFF.37418.1
         (136 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g026290.1 | hypothetical protein | HC | chr5:10812516-1081...   127   2e-30

>Medtr5g026290.1 | hypothetical protein | HC |
           chr5:10812516-10811825 | 20130731
          Length = 135

 Score =  127 bits (320), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 71/137 (51%), Positives = 86/137 (62%), Gaps = 3/137 (2%)

Query: 1   MASVQLVSDVRCQSLIHCAASYGERGSVLSLSHRRNHGYRRISNCGGGGVCTEGNFKEHN 60
           MAS QLVSDV+CQ+L+HCAASYGERGS  + S R+++GYRRI          E NFKEH 
Sbjct: 1   MAS-QLVSDVKCQTLMHCAASYGERGSKPTPSRRKSYGYRRIEK-NSIIYPEESNFKEHK 58

Query: 61  NIMEQGKDAKHSTTXXXXXXXXXXXXFSYLASSFLYMLTKVKALYNGFPSSGGGESR-MG 119
           N     +     +T            FSY+A+SFLY++ KVK  YNGF      ESR MG
Sbjct: 59  NKGSSLEKGTKRSTNLAQAQKLHRLGFSYIATSFLYIVIKVKEFYNGFLGDVASESRMMG 118

Query: 120 IEAPKAEAYFSVPVLPN 136
           I+AP AE YFSVPV+PN
Sbjct: 119 IDAPMAEPYFSVPVIPN 135